RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 ZC3H4Q9UPT8 1303 aaKnown RBP12.73□□□□□ -0.37
HERC1-212ENST00000561348 DICER1Q9UPY3 1922 aaKnown RBP12.73□□□□□ -0.37
HERC1-212ENST00000561348 MYCNP04198 464 aaPredicted RBP12.73□□□□□ -0.37
HERC1-212ENST00000561348 VEGFAP15692 232 aaPredicted RBP12.73□□□□□ -0.37
HERC1-212ENST00000561348 KCNJ4P48050 445 aa12.73□□□□□ -0.37
HERC1-212ENST00000561348 CCT4P50991 539 aaKnown RBP12.73□□□□□ -0.37
HERC1-212ENST00000561348 FOXO4P98177 505 aa12.73□□□□□ -0.37
HERC1-212ENST00000561348 HELBQ8NG08 1087 aaPredicted RBP12.73□□□□□ -0.37
HERC1-212ENST00000561348 EYA3Q99504 573 aa12.73□□□□□ -0.37
HERC1-212ENST00000561348 ZC3H12CQ9C0D7 883 aaKnown RBP12.73□□□□□ -0.37
HERC1-212ENST00000561348 DBNDD1Q9H9R9 158 aa12.73□□□□□ -0.37
HERC1-212ENST00000561348 CNNM1Q9NRU3 951 aa12.73□□□□□ -0.37
HERC1-212ENST00000561348 POLLQ9UGP5 575 aa12.73□□□□□ -0.37
HERC1-212ENST00000561348 TNNQ9UQP3 1299 aa12.73□□□□□ -0.37
HERC1-212ENST00000561348 KIF3CO14782 793 aa12.72□□□□□ -0.37
HERC1-212ENST00000561348 RAD17O75943 681 aa12.72□□□□□ -0.37
HERC1-212ENST00000561348 UBTFL1P0CB47 393 aaPredicted RBP12.72□□□□□ -0.37
HERC1-212ENST00000561348 C1QTNF8P60827 252 aa12.72□□□□□ -0.37
HERC1-212ENST00000561348 EAPPQ56P03 285 aaPredicted RBP12.72□□□□□ -0.37
HERC1-212ENST00000561348 TBC1D16Q8TBP0 767 aa12.72□□□□□ -0.37
HERC1-212ENST00000561348 FBXW7Q969H0 707 aa12.72□□□□□ -0.37
HERC1-212ENST00000561348 PLA2G12BQ9BX93 195 aa12.72□□□□□ -0.37
HERC1-212ENST00000561348 BICC1Q9H694 974 aaKnown RBP12.72□□□□□ -0.37
HERC1-212ENST00000561348 WTIPA6NIX2 430 aaPredicted RBP12.71□□□□□ -0.37
HERC1-212ENST00000561348 CSF1RP07333 972 aa12.71□□□□□ -0.37
HERC1-212ENST00000561348 ZKSCAN2Q63HK3 967 aa12.71□□□□□ -0.37
HERC1-212ENST00000561348 FTSJ3Q8IY81 847 aaKnown RBP12.71□□□□□ -0.37
HERC1-212ENST00000561348 USP44Q9H0E7 712 aa12.71□□□□□ -0.37
HERC1-212ENST00000561348 BSDC1Q9NW68 430 aaPredicted RBP12.71□□□□□ -0.37
HERC1-212ENST00000561348 ZNRF3Q9ULT6 936 aa12.71□□□□□ -0.37
HERC1-212ENST00000561348 MINPP1Q9UNW1 487 aa12.71□□□□□ -0.37
HERC1-212ENST00000561348 CLEC11AQ9Y240 323 aa12.71□□□□□ -0.37
HERC1-212ENST00000561348 XDHP47989 1333 aa12.7□□□□□ -0.38
HERC1-212ENST00000561348 FZD9O00144 591 aa12.7□□□□□ -0.38
HERC1-212ENST00000561348 TAF5LO75529 589 aa12.7□□□□□ -0.38
HERC1-212ENST00000561348 TRIM27P14373 513 aa12.7□□□□□ -0.38
HERC1-212ENST00000561348 LMOD1P29536 600 aaPredicted RBP12.7□□□□□ -0.38
HERC1-212ENST00000561348 KIAA2012Q0VF49 1180 aa12.7□□□□□ -0.38
HERC1-212ENST00000561348 ATF7IPQ6VMQ6 1270 aa12.7□□□□□ -0.38
HERC1-212ENST00000561348 LDHAL6AQ6ZMR3 332 aa12.7□□□□□ -0.38
HERC1-212ENST00000561348 RTFDC1Q9BY42 306 aaPredicted RBP12.7□□□□□ -0.38
HERC1-212ENST00000561348 ECE2O60344 883 aa12.69□□□□□ -0.38
HERC1-212ENST00000561348 TOMM70O94826 608 aa12.69□□□□□ -0.38
HERC1-212ENST00000561348 ATP2B4P23634 1241 aa12.69□□□□□ -0.38
HERC1-212ENST00000561348 CHRNDQ07001 517 aa12.69□□□□□ -0.38
HERC1-212ENST00000561348 CIAPIN1Q6FI81 312 aa12.69□□□□□ -0.38
HERC1-212ENST00000561348 KLHDC4Q8TBB5 520 aa12.69□□□□□ -0.38
HERC1-212ENST00000561348 COL4A5P29400 1685 aa12.69□□□□□ -0.38
HERC1-212ENST00000561348 SNED1Q8TER0 1413 aa12.69□□□□□ -0.38
HERC1-212ENST00000561348 IQCA1LA6NCM1 817 aa12.68□□□□□ -0.38
HERC1-212ENST00000561348 SNAP23O00161 211 aa12.68□□□□□ -0.38
HERC1-212ENST00000561348 CXCL9Q07325 125 aa12.68□□□□□ -0.38
HERC1-212ENST00000561348 TNIP1Q15025 636 aa12.68□□□□□ -0.38
HERC1-212ENST00000561348 ITPRIPQ8IWB1 547 aa12.68□□□□□ -0.38
HERC1-212ENST00000561348 GPC2Q8N158 579 aa12.68□□□□□ -0.38
HERC1-212ENST00000561348 ARHGAP45Q92619 1136 aa12.68□□□□□ -0.38
HERC1-212ENST00000561348 KAZALD1Q96I82 304 aa12.68□□□□□ -0.38
HERC1-212ENST00000561348 MEIS3Q99687 375 aa12.68□□□□□ -0.38
HERC1-212ENST00000561348 ANKRD2Q9GZV1 360 aa12.68□□□□□ -0.38
HERC1-212ENST00000561348 KCNQ5Q9NR82 932 aa12.68□□□□□ -0.38
HERC1-212ENST00000561348 HACL1Q9UJ83 578 aa12.68□□□□□ -0.38
HERC1-212ENST00000561348 LRRFIP2Q9Y608 721 aaKnown RBP12.68□□□□□ -0.38
HERC1-212ENST00000561348 U3KPZ7 1027 aaPredicted RBP12.68□□□□□ -0.38
HERC1-212ENST00000561348 RTL9Q8NET4 1388 aa12.68□□□□□ -0.38
HERC1-212ENST00000561348 POTECB2RU33 542 aa12.67□□□□□ -0.38
HERC1-212ENST00000561348 BRPF1P55201 1214 aaPredicted RBP12.67□□□□□ -0.38
HERC1-212ENST00000561348 TMEM57Q8N5G2 664 aa12.67□□□□□ -0.38
HERC1-212ENST00000561348 ANKRD44Q8N8A2 993 aa12.67□□□□□ -0.38
HERC1-212ENST00000561348 PUS3Q9BZE2 481 aaKnown RBP12.67□□□□□ -0.38
HERC1-212ENST00000561348 SIL1Q9H173 461 aa12.67□□□□□ -0.38
HERC1-212ENST00000561348 VPS33BQ9H267 617 aa12.67□□□□□ -0.38
HERC1-212ENST00000561348 PODXL2Q9NZ53 605 aa12.67□□□□□ -0.38
HERC1-212ENST00000561348 ZBTB12Q9Y330 459 aaPredicted RBP12.67□□□□□ -0.38
HERC1-212ENST00000561348 LRRC37AA6NMS7 1700 aa12.67□□□□□ -0.38
HERC1-212ENST00000561348 ZNF804BA4D1E1 1349 aa12.66□□□□□ -0.38
HERC1-212ENST00000561348 UTYO14607 1347 aa12.66□□□□□ -0.38
HERC1-212ENST00000561348 DUOX1Q9NRD9 1551 aa12.66□□□□□ -0.38
HERC1-212ENST00000561348 YDJCA8MPS7 323 aa12.66□□□□□ -0.38
HERC1-212ENST00000561348 POTEIP0CG38 1075 aa12.66□□□□□ -0.38
HERC1-212ENST00000561348 POTEJP0CG39 1038 aa12.66□□□□□ -0.38
HERC1-212ENST00000561348 EPHX2P34913 555 aa12.66□□□□□ -0.38
HERC1-212ENST00000561348 GMPSP49915 693 aaPredicted RBP12.66□□□□□ -0.38
HERC1-212ENST00000561348 DZIP1LQ8IYY4 767 aaKnown RBP12.66□□□□□ -0.38
HERC1-212ENST00000561348 RCAN3Q9UKA8 241 aa12.66□□□□□ -0.38
HERC1-212ENST00000561348 PSMD14O00487 310 aa12.65□□□□□ -0.38
HERC1-212ENST00000561348 GNAI3P08754 354 aa12.65□□□□□ -0.38
HERC1-212ENST00000561348 KLRK1P26718 216 aa12.65□□□□□ -0.38
HERC1-212ENST00000561348 EPS15P42566 896 aa12.65□□□□□ -0.38
HERC1-212ENST00000561348 LRRC24Q50LG9 513 aa12.65□□□□□ -0.38
HERC1-212ENST00000561348 METTL24Q5JXM2 366 aa12.65□□□□□ -0.38
HERC1-212ENST00000561348 RBM26Q5T8P6 1007 aaKnown RBP12.65□□□□□ -0.38
HERC1-212ENST00000561348 INTS3Q68E01 1043 aaKnown RBP12.65□□□□□ -0.38
HERC1-212ENST00000561348 SMC1BQ8NDV3 1235 aa12.65□□□□□ -0.38
HERC1-212ENST00000561348 PANK1Q8TE04 598 aa12.65□□□□□ -0.38
HERC1-212ENST00000561348 TAF1DQ9H5J8 278 aaPredicted RBP12.65□□□□□ -0.38
HERC1-212ENST00000561348 HDAC5Q9UQL6 1122 aa12.65□□□□□ -0.38
HERC1-212ENST00000561348 LEMD3Q9Y2U8 911 aa12.65□□□□□ -0.38
HERC1-212ENST00000561348 TXNRD3Q86VQ6 643 aa12.64□□□□□ -0.39
HERC1-212ENST00000561348 RBM46Q8TBY0 533 aaKnown RBP12.64□□□□□ -0.39
HERC1-212ENST00000561348 C1orf115Q9H7X2 142 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms