RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 NSUN5Q96P11 429 aaKnown RBP7.67□□□□□ -1.18
CASC4-211ENST00000561305 FNDC3AQ9Y2H6 1198 aaKnown RBP7.67□□□□□ -1.18
CASC4-211ENST00000561305 TMEM88BA6NKF7 163 aa7.66□□□□□ -1.18
CASC4-211ENST00000561305 RBSNQ9H1K0 784 aa7.66□□□□□ -1.18
CASC4-211ENST00000561305 C1orf115Q9H7X2 142 aa7.66□□□□□ -1.18
CASC4-211ENST00000561305 DYRK3O43781 588 aa7.65□□□□□ -1.18
CASC4-211ENST00000561305 DEAF1O75398 565 aaPredicted RBP7.65□□□□□ -1.18
CASC4-211ENST00000561305 IGF2-ASQ6U949 168 aa7.65□□□□□ -1.18
CASC4-211ENST00000561305 HELQQ8TDG4 1101 aa7.65□□□□□ -1.18
CASC4-211ENST00000561305 SSBP4Q9BWG4 385 aaPredicted RBP7.65□□□□□ -1.18
CASC4-211ENST00000561305 DLL1O00548 723 aa7.64□□□□□ -1.19
CASC4-211ENST00000561305 H2AFB1P0C5Y9 115 aa7.64□□□□□ -1.19
CASC4-211ENST00000561305 H2AFB2P0C5Z0 115 aa7.64□□□□□ -1.19
CASC4-211ENST00000561305 COL13A1Q5TAT6 717 aaPredicted RBP7.64□□□□□ -1.19
CASC4-211ENST00000561305 CACTIN-AS1Q8N1I8 211 aa7.64□□□□□ -1.19
CASC4-211ENST00000561305 USP21Q9UK80 565 aa7.64□□□□□ -1.19
CASC4-211ENST00000561305 KIF4AO95239 1232 aa7.63□□□□□ -1.19
CASC4-211ENST00000561305 SSFA2P28290 1259 aa7.63□□□□□ -1.19
CASC4-211ENST00000561305 HYAL2Q12891 473 aa7.63□□□□□ -1.19
CASC4-211ENST00000561305 TTC39BQ5VTQ0 682 aaPredicted RBP7.63□□□□□ -1.19
CASC4-211ENST00000561305 IL22RA1Q8N6P7 574 aa7.63□□□□□ -1.19
CASC4-211ENST00000561305 ABI2Q9NYB9 513 aaPredicted RBP7.63□□□□□ -1.19
CASC4-211ENST00000561305 SCNN1AP37088 669 aa7.62□□□□□ -1.19
CASC4-211ENST00000561305 XP32Q5T750 250 aa7.62□□□□□ -1.19
CASC4-211ENST00000561305 GDF6Q6KF10 455 aaPredicted RBP7.62□□□□□ -1.19
CASC4-211ENST00000561305 PDE12Q6L8Q7 609 aaKnown RBP7.62□□□□□ -1.19
CASC4-211ENST00000561305 ATCAYQ86WG3 371 aa7.62□□□□□ -1.19
CASC4-211ENST00000561305 WFDC12Q8WWY7 111 aa7.62□□□□□ -1.19
CASC4-211ENST00000561305 NUDT16Q96DE0 195 aaKnown RBP7.62□□□□□ -1.19
CASC4-211ENST00000561305 SRA1Q9HD15 236 aaKnown RBP7.62□□□□□ -1.19
CASC4-211ENST00000561305 TRIM33Q9UPN9 1127 aa7.62□□□□□ -1.19
CASC4-211ENST00000561305 RPLP1P05386 114 aaKnown RBP7.61□□□□□ -1.19
CASC4-211ENST00000561305 XKR5Q6UX68 686 aa7.61□□□□□ -1.19
CASC4-211ENST00000561305 Q8N3U1 123 aa7.61□□□□□ -1.19
CASC4-211ENST00000561305 ELP3Q9H9T3 547 aa7.61□□□□□ -1.19
CASC4-211ENST00000561305 CYP2E1P05181 493 aaPredicted RBP7.6□□□□□ -1.19
CASC4-211ENST00000561305 NOS3P29474 1203 aa7.6□□□□□ -1.19
CASC4-211ENST00000561305 SETDB1Q15047 1291 aa7.6□□□□□ -1.19
CASC4-211ENST00000561305 NOM1Q5C9Z4 860 aaKnown RBP7.6□□□□□ -1.19
CASC4-211ENST00000561305 MAP4K3Q8IVH8 894 aa7.6□□□□□ -1.19
CASC4-211ENST00000561305 GTF3C2Q8WUA4 911 aaPredicted RBP7.6□□□□□ -1.19
CASC4-211ENST00000561305 SPACA7Q96KW9 195 aa7.6□□□□□ -1.19
CASC4-211ENST00000561305 MUC3BQ9H195 1237 aa7.6□□□□□ -1.19
CASC4-211ENST00000561305 IREB2P48200 963 aaKnown RBP7.59□□□□□ -1.19
CASC4-211ENST00000561305 ATP11AP98196 1134 aa7.59□□□□□ -1.19
CASC4-211ENST00000561305 TMEM130Q8N3G9 435 aa7.59□□□□□ -1.19
CASC4-211ENST00000561305 CEP120Q8N960 986 aa7.59□□□□□ -1.19
CASC4-211ENST00000561305 EDEM1Q92611 657 aa7.59□□□□□ -1.19
CASC4-211ENST00000561305 TP53INP1Q96A56 240 aa7.59□□□□□ -1.19
CASC4-211ENST00000561305 TMEM63CQ9P1W3 806 aa7.59□□□□□ -1.19
CASC4-211ENST00000561305 NPR3P17342 541 aa7.58□□□□□ -1.2
CASC4-211ENST00000561305 EIF1AXP47813 144 aaKnown RBP7.58□□□□□ -1.2
CASC4-211ENST00000561305 FOXD4L6Q3SYB3 417 aaPredicted RBP7.58□□□□□ -1.2
CASC4-211ENST00000561305 PRSS36Q5K4E3 855 aa7.58□□□□□ -1.2
CASC4-211ENST00000561305 ZMYM1Q5SVZ6 1142 aa7.58□□□□□ -1.2
CASC4-211ENST00000561305 FOXD4L3Q6VB84 417 aaPredicted RBP7.58□□□□□ -1.2
CASC4-211ENST00000561305 DCAF11Q8TEB1 546 aa7.58□□□□□ -1.2
CASC4-211ENST00000561305 MRPL18Q9H0U6 180 aaKnown RBP7.58□□□□□ -1.2
CASC4-211ENST00000561305 GGNBP2Q9H3C7 697 aa7.58□□□□□ -1.2
CASC4-211ENST00000561305 CNTN3Q9P232 1028 aa7.58□□□□□ -1.2
CASC4-211ENST00000561305 PPME1Q9Y570 386 aa7.58□□□□□ -1.2
CASC4-211ENST00000561305 SMNDC1O75940 238 aaKnown RBP eCLIP7.57□□□□□ -1.2
CASC4-211ENST00000561305 PDGFAP04085 211 aa7.57□□□□□ -1.2
CASC4-211ENST00000561305 MPSTP25325 297 aa7.57□□□□□ -1.2
CASC4-211ENST00000561305 MZF1P28698 734 aaPredicted RBP7.57□□□□□ -1.2
CASC4-211ENST00000561305 DNM1Q05193 864 aaKnown RBP7.57□□□□□ -1.2
CASC4-211ENST00000561305 CEP135Q66GS9 1140 aa7.57□□□□□ -1.2
CASC4-211ENST00000561305 PHLDB3Q6NSJ2 640 aa7.57□□□□□ -1.2
CASC4-211ENST00000561305 ZNF438Q7Z4V0 828 aa7.57□□□□□ -1.2
CASC4-211ENST00000561305 C14orf37Q86TY3 774 aa7.57□□□□□ -1.2
CASC4-211ENST00000561305 MEGF10Q96KG7 1140 aa7.57□□□□□ -1.2
CASC4-211ENST00000561305 PBX4Q9BYU1 374 aa7.57□□□□□ -1.2
CASC4-211ENST00000561305 RASSF4Q9H2L5 321 aa7.57□□□□□ -1.2
CASC4-211ENST00000561305 SALL4Q9UJQ4 1053 aa7.57□□□□□ -1.2
CASC4-211ENST00000561305 PCSK2P16519 638 aa7.56□□□□□ -1.2
CASC4-211ENST00000561305 ALKBH2Q6NS38 261 aa7.56□□□□□ -1.2
CASC4-211ENST00000561305 ADAMTSL4Q6UY14 1074 aa7.56□□□□□ -1.2
CASC4-211ENST00000561305 F8W735 103 aaPredicted RBP7.55□□□□□ -1.2
CASC4-211ENST00000561305 LINC01387J3KSC0 135 aa7.55□□□□□ -1.2
CASC4-211ENST00000561305 TM4SF5O14894 197 aa7.55□□□□□ -1.2
CASC4-211ENST00000561305 CDC27P30260 824 aa7.55□□□□□ -1.2
CASC4-211ENST00000561305 Q6ZS46 218 aa7.55□□□□□ -1.2
CASC4-211ENST00000561305 DZIP1LQ8IYY4 767 aaKnown RBP7.55□□□□□ -1.2
CASC4-211ENST00000561305 C1orf127Q8N9H9 656 aa7.55□□□□□ -1.2
CASC4-211ENST00000561305 GALNT11Q8NCW6 608 aa7.55□□□□□ -1.2
CASC4-211ENST00000561305 LACRTQ9GZZ8 138 aa7.55□□□□□ -1.2
CASC4-211ENST00000561305 ADAM19Q9H013 955 aa7.55□□□□□ -1.2
CASC4-211ENST00000561305 AKTIPQ9H8T0 292 aa7.55□□□□□ -1.2
CASC4-211ENST00000561305 MTMR3Q13615 1198 aa7.54□□□□□ -1.2
CASC4-211ENST00000561305 NCAPG2Q86XI2 1143 aa7.54□□□□□ -1.2
CASC4-211ENST00000561305 POP1Q99575 1024 aaKnown RBP7.54□□□□□ -1.2
CASC4-211ENST00000561305 KANSL3Q9P2N6 904 aa7.54□□□□□ -1.2
CASC4-211ENST00000561305 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.54□□□□□ -1.2
CASC4-211ENST00000561305 CARNS1A5YM72 827 aa7.53□□□□□ -1.2
CASC4-211ENST00000561305 A6NHS1 94 aa7.53□□□□□ -1.2
CASC4-211ENST00000561305 NFKBIEO00221 500 aa7.53□□□□□ -1.2
CASC4-211ENST00000561305 ALX3O95076 343 aa7.53□□□□□ -1.2
CASC4-211ENST00000561305 SF3B2Q13435 895 aaKnown RBP7.53□□□□□ -1.2
CASC4-211ENST00000561305 C8orf34Q49A92 452 aa7.53□□□□□ -1.2
CASC4-211ENST00000561305 PMEPA1Q969W9 287 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms