RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 BICC1Q9H694 974 aaKnown RBP25.08■■□□□ 1.61
TSPAN3-210ENST00000561277 TNNQ9UQP3 1299 aa25.08■■□□□ 1.61
TSPAN3-210ENST00000561277 RIMBP2O15034 1052 aa25.07■■□□□ 1.6
TSPAN3-210ENST00000561277 EIF6P56537 245 aaKnown RBP25.07■■□□□ 1.6
TSPAN3-210ENST00000561277 WASHC4Q2M389 1173 aa25.07■■□□□ 1.6
TSPAN3-210ENST00000561277 CCDC57Q2TAC2 916 aa25.07■■□□□ 1.6
TSPAN3-210ENST00000561277 ATF7IPQ6VMQ6 1270 aa25.07■■□□□ 1.6
TSPAN3-210ENST00000561277 PODXL2Q9NZ53 605 aa25.07■■□□□ 1.6
TSPAN3-210ENST00000561277 GGA1Q9UJY5 639 aa25.07■■□□□ 1.6
TSPAN3-210ENST00000561277 MINPP1Q9UNW1 487 aa25.07■■□□□ 1.6
TSPAN3-210ENST00000561277 XDHP47989 1333 aa25.07■■□□□ 1.6
TSPAN3-210ENST00000561277 CLUAP1Q96AJ1 413 aa25.06■■□□□ 1.6
TSPAN3-210ENST00000561277 TAF7LQ5H9L4 462 aa25.05■■□□□ 1.6
TSPAN3-210ENST00000561277 EYA3Q99504 573 aa25.05■■□□□ 1.6
TSPAN3-210ENST00000561277 WDR90Q96KV7 1748 aa25.05■■□□□ 1.6
TSPAN3-210ENST00000561277 C16orf71Q8IYS4 520 aaPredicted RBP25.05■■□□□ 1.6
TSPAN3-210ENST00000561277 GJA3Q9Y6H8 435 aa25.05■■□□□ 1.6
TSPAN3-210ENST00000561277 ZKSCAN2Q63HK3 967 aa25.04■■□□□ 1.6
TSPAN3-210ENST00000561277 ZNF594Q96JF6 807 aaPredicted RBP25.04■■□□□ 1.6
TSPAN3-210ENST00000561277 ZNRF3Q9ULT6 936 aa25.04■■□□□ 1.6
TSPAN3-210ENST00000561277 UBTFL1P0CB47 393 aaPredicted RBP25.03■■□□□ 1.6
TSPAN3-210ENST00000561277 VEGFAP15692 232 aaPredicted RBP25.03■■□□□ 1.6
TSPAN3-210ENST00000561277 C1QTNF8P60827 252 aa25.02■■□□□ 1.6
TSPAN3-210ENST00000561277 INTS3Q68E01 1043 aaKnown RBP25.02■■□□□ 1.6
TSPAN3-210ENST00000561277 GPC2Q8N158 579 aa25.02■■□□□ 1.6
TSPAN3-210ENST00000561277 ANKRD44Q8N8A2 993 aa25.02■■□□□ 1.6
TSPAN3-210ENST00000561277 YTHDC1Q96MU7 727 aaKnown RBP25.02■■□□□ 1.6
TSPAN3-210ENST00000561277 DBNDD1Q9H9R9 158 aa25.02■■□□□ 1.6
TSPAN3-210ENST00000561277 POTECB2RU33 542 aa25.01■■□□□ 1.59
TSPAN3-210ENST00000561277 ATP2B4P23634 1241 aa25.01■■□□□ 1.59
TSPAN3-210ENST00000561277 RABL6Q3YEC7 729 aaPredicted RBP25.01■■□□□ 1.59
TSPAN3-210ENST00000561277 ZC3H12CQ9C0D7 883 aaKnown RBP25.01■■□□□ 1.59
TSPAN3-210ENST00000561277 WTIPA6NIX2 430 aaPredicted RBP25.01■■□□□ 1.59
TSPAN3-210ENST00000561277 DOK7Q18PE1 504 aa25.01■■□□□ 1.59
TSPAN3-210ENST00000561277 MEIS3Q99687 375 aa25.01■■□□□ 1.59
TSPAN3-210ENST00000561277 CHRNDQ07001 517 aa25■■□□□ 1.59
TSPAN3-210ENST00000561277 LDHAL6AQ6ZMR3 332 aa25■■□□□ 1.59
TSPAN3-210ENST00000561277 L3MBTL3Q96JM7 780 aaPredicted RBP25■■□□□ 1.59
TSPAN3-210ENST00000561277 RAD17O75943 681 aa24.99■■□□□ 1.59
TSPAN3-210ENST00000561277 TOMM70O94826 608 aa24.99■■□□□ 1.59
TSPAN3-210ENST00000561277 ANKRD2Q9GZV1 360 aa24.99■■□□□ 1.59
TSPAN3-210ENST00000561277 CNNM1Q9NRU3 951 aa24.99■■□□□ 1.59
TSPAN3-210ENST00000561277 YDJCA8MPS7 323 aa24.98■■□□□ 1.59
TSPAN3-210ENST00000561277 G3V3G9 751 aa24.98■■□□□ 1.59
TSPAN3-210ENST00000561277 ECE2O60344 883 aa24.98■■□□□ 1.59
TSPAN3-210ENST00000561277 CXCL9Q07325 125 aa24.98■■□□□ 1.59
TSPAN3-210ENST00000561277 DCAF8Q5TAQ9 597 aa24.98■■□□□ 1.59
TSPAN3-210ENST00000561277 FTSJ3Q8IY81 847 aaKnown RBP24.98■■□□□ 1.59
TSPAN3-210ENST00000561277 HELBQ8NG08 1087 aaPredicted RBP24.97■■□□□ 1.59
TSPAN3-210ENST00000561277 IQCA1LA6NCM1 817 aa24.97■■□□□ 1.59
TSPAN3-210ENST00000561277 KCNJ4P48050 445 aa24.97■■□□□ 1.59
TSPAN3-210ENST00000561277 CIAPIN1Q6FI81 312 aa24.97■■□□□ 1.59
TSPAN3-210ENST00000561277 TMEM57Q8N5G2 664 aa24.97■■□□□ 1.59
TSPAN3-210ENST00000561277 LRRFIP2Q9Y608 721 aaKnown RBP24.97■■□□□ 1.59
TSPAN3-210ENST00000561277 ZNF804BA4D1E1 1349 aa24.96■■□□□ 1.59
TSPAN3-210ENST00000561277 TAF5LO75529 589 aa24.96■■□□□ 1.59
TSPAN3-210ENST00000561277 LEMD3Q9Y2U8 911 aa24.96■■□□□ 1.59
TSPAN3-210ENST00000561277 A0A1B0GUL6 1792 aa24.96■■□□□ 1.59
TSPAN3-210ENST00000561277 SCN4AP35499 1836 aa24.95■■□□□ 1.59
TSPAN3-210ENST00000561277 MED23Q9ULK4 1368 aa24.95■■□□□ 1.58
TSPAN3-210ENST00000561277 PLIN1O60240 522 aa24.95■■□□□ 1.58
TSPAN3-210ENST00000561277 PUS3Q9BZE2 481 aaKnown RBP24.95■■□□□ 1.58
TSPAN3-210ENST00000561277 HACL1Q9UJ83 578 aa24.95■■□□□ 1.58
TSPAN3-210ENST00000561277 GNAI3P08754 354 aa24.94■■□□□ 1.58
TSPAN3-210ENST00000561277 DZIP1LQ8IYY4 767 aaKnown RBP24.94■■□□□ 1.58
TSPAN3-210ENST00000561277 KLHDC4Q8TBB5 520 aa24.94■■□□□ 1.58
TSPAN3-210ENST00000561277 RCAN3Q9UKA8 241 aa24.94■■□□□ 1.58
TSPAN3-210ENST00000561277 HDAC5Q9UQL6 1122 aa24.94■■□□□ 1.58
TSPAN3-210ENST00000561277 SNAP23O00161 211 aa24.93■■□□□ 1.58
TSPAN3-210ENST00000561277 KLRK1P26718 216 aa24.93■■□□□ 1.58
TSPAN3-210ENST00000561277 TNIP1Q15025 636 aa24.93■■□□□ 1.58
TSPAN3-210ENST00000561277 RBM46Q8TBY0 533 aaKnown RBP24.93■■□□□ 1.58
TSPAN3-210ENST00000561277 TAF1DQ9H5J8 278 aaPredicted RBP24.93■■□□□ 1.58
TSPAN3-210ENST00000561277 KCNQ5Q9NR82 932 aa24.93■■□□□ 1.58
TSPAN3-210ENST00000561277 LMOD1P29536 600 aaPredicted RBP24.93■■□□□ 1.58
TSPAN3-210ENST00000561277 SCNN1DP51172 638 aa24.93■■□□□ 1.58
TSPAN3-210ENST00000561277 RLBP1P12271 317 aa24.92■■□□□ 1.58
TSPAN3-210ENST00000561277 EPHX2P34913 555 aa24.92■■□□□ 1.58
TSPAN3-210ENST00000561277 TXNRD3Q86VQ6 643 aa24.92■■□□□ 1.58
TSPAN3-210ENST00000561277 PSMD14O00487 310 aa24.91■■□□□ 1.58
TSPAN3-210ENST00000561277 POTEIP0CG38 1075 aa24.91■■□□□ 1.58
TSPAN3-210ENST00000561277 POTEJP0CG39 1038 aa24.91■■□□□ 1.58
TSPAN3-210ENST00000561277 GMPSP49915 693 aaPredicted RBP24.91■■□□□ 1.58
TSPAN3-210ENST00000561277 LRRC24Q50LG9 513 aa24.91■■□□□ 1.58
TSPAN3-210ENST00000561277 EAPPQ56P03 285 aaPredicted RBP24.91■■□□□ 1.58
TSPAN3-210ENST00000561277 ITPRIPQ8IWB1 547 aa24.91■■□□□ 1.58
TSPAN3-210ENST00000561277 SCN9AQ15858 1988 aa24.9■■□□□ 1.58
TSPAN3-210ENST00000561277 EPS15P42566 896 aa24.9■■□□□ 1.58
TSPAN3-210ENST00000561277 RFX5P48382 616 aaPredicted RBP24.89■■□□□ 1.58
TSPAN3-210ENST00000561277 ZBTB12Q9Y330 459 aaPredicted RBP24.89■■□□□ 1.58
TSPAN3-210ENST00000561277 RIPOR2Q9Y4F9 1068 aa24.89■■□□□ 1.58
TSPAN3-210ENST00000561277 SMC1BQ8NDV3 1235 aa24.88■■□□□ 1.57
TSPAN3-210ENST00000561277 MROH5Q6ZUA9 1318 aa24.88■■□□□ 1.57
TSPAN3-210ENST00000561277 PANK1Q8TE04 598 aa24.88■■□□□ 1.57
TSPAN3-210ENST00000561277 GPRC5DQ9NZD1 345 aa24.88■■□□□ 1.57
TSPAN3-210ENST00000561277 GNAI2P04899 355 aa24.87■■□□□ 1.57
TSPAN3-210ENST00000561277 PTPN12Q05209 780 aaKnown RBP24.87■■□□□ 1.57
TSPAN3-210ENST00000561277 METTL24Q5JXM2 366 aa24.87■■□□□ 1.57
TSPAN3-210ENST00000561277 PODNQ7Z5L7 613 aa24.87■■□□□ 1.57
TSPAN3-210ENST00000561277 FSTL1Q12841 308 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms