RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 LINS1Q8NG48 757 aa21.94■■□□□ 1.1
CDC42BPB-208ENST00000561271 CREBZFQ9NS37 354 aa21.94■■□□□ 1.1
CDC42BPB-208ENST00000561271 ANKIB1Q9P2G1 1089 aa21.94■■□□□ 1.1
CDC42BPB-208ENST00000561271 ECE2O60344 883 aa21.93■■□□□ 1.1
CDC42BPB-208ENST00000561271 JMYQ8N9B5 988 aa21.93■■□□□ 1.1
CDC42BPB-208ENST00000561271 CDC5LQ99459 802 aaKnown RBP21.93■■□□□ 1.1
CDC42BPB-208ENST00000561271 EYA3Q99504 573 aa21.93■■□□□ 1.1
CDC42BPB-208ENST00000561271 BCL2L13Q9BXK5 485 aa21.93■■□□□ 1.1
CDC42BPB-208ENST00000561271 PODXL2Q9NZ53 605 aa21.93■■□□□ 1.1
CDC42BPB-208ENST00000561271 CASP7P55210 303 aa21.92■■□□□ 1.1
CDC42BPB-208ENST00000561271 TNIP1Q15025 636 aa21.92■■□□□ 1.1
CDC42BPB-208ENST00000561271 DOK7Q18PE1 504 aa21.92■■□□□ 1.1
CDC42BPB-208ENST00000561271 CNTROBQ8N137 903 aa21.92■■□□□ 1.1
CDC42BPB-208ENST00000561271 GGA1Q9UJY5 639 aa21.92■■□□□ 1.1
CDC42BPB-208ENST00000561271 XDHP47989 1333 aa21.91■■□□□ 1.1
CDC42BPB-208ENST00000561271 SHTN1A0MZ66 631 aa21.91■■□□□ 1.1
CDC42BPB-208ENST00000561271 FAM161AQ3B820 660 aa21.91■■□□□ 1.1
CDC42BPB-208ENST00000561271 USP50Q70EL3 339 aaPredicted RBP21.91■■□□□ 1.1
CDC42BPB-208ENST00000561271 ADARB2Q9NS39 739 aaKnown RBP21.91■■□□□ 1.1
CDC42BPB-208ENST00000561271 PSMD14O00487 310 aa21.9■■□□□ 1.1
CDC42BPB-208ENST00000561271 PLA2G12BQ9BX93 195 aa21.9■■□□□ 1.1
CDC42BPB-208ENST00000561271 MKRN1Q9UHC7 482 aaKnown RBP21.9■■□□□ 1.1
CDC42BPB-208ENST00000561271 BEND3Q5T5X7 828 aa21.89■■□□□ 1.09
CDC42BPB-208ENST00000561271 KCNQ5Q9NR82 932 aa21.89■■□□□ 1.09
CDC42BPB-208ENST00000561271 ZBTB12Q9Y330 459 aaPredicted RBP21.89■■□□□ 1.09
CDC42BPB-208ENST00000561271 TRPM4Q8TD43 1214 aa21.88■■□□□ 1.09
CDC42BPB-208ENST00000561271 ZC3H12CQ9C0D7 883 aaKnown RBP21.88■■□□□ 1.09
CDC42BPB-208ENST00000561271 THSD7BQ9C0I4 1608 aa21.88■■□□□ 1.09
CDC42BPB-208ENST00000561271 CNTNAP1P78357 1384 aa21.87■■□□□ 1.09
CDC42BPB-208ENST00000561271 TMEM88BA6NKF7 163 aa21.87■■□□□ 1.09
CDC42BPB-208ENST00000561271 ITGA6P23229 1130 aa21.87■■□□□ 1.09
CDC42BPB-208ENST00000561271 FMR1Q06787 632 aaKnown RBP eCLIP21.87■■□□□ 1.09
CDC42BPB-208ENST00000561271 MICALL2Q8IY33 904 aa21.87■■□□□ 1.09
CDC42BPB-208ENST00000561271 ECM29Q5VYK3 1845 aa21.87■■□□□ 1.09
CDC42BPB-208ENST00000561271 WTIPA6NIX2 430 aaPredicted RBP21.86■■□□□ 1.09
CDC42BPB-208ENST00000561271 E9PSI1 815 aa21.86■■□□□ 1.09
CDC42BPB-208ENST00000561271 BSDC1Q9NW68 430 aaPredicted RBP21.86■■□□□ 1.09
CDC42BPB-208ENST00000561271 CNOT7Q9UIV1 285 aaKnown RBP21.86■■□□□ 1.09
CDC42BPB-208ENST00000561271 MYH13Q9UKX3 1938 aa21.85■■□□□ 1.09
CDC42BPB-208ENST00000561271 G3V3G9 751 aa21.85■■□□□ 1.09
CDC42BPB-208ENST00000561271 CCER2I3L3R5 266 aa21.85■■□□□ 1.09
CDC42BPB-208ENST00000561271 TRAF5O00463 557 aa21.85■■□□□ 1.09
CDC42BPB-208ENST00000561271 ATP2B4P23634 1241 aa21.85■■□□□ 1.09
CDC42BPB-208ENST00000561271 IGHMBP2P38935 993 aaKnown RBP21.85■■□□□ 1.09
CDC42BPB-208ENST00000561271 DCAF8Q5TAQ9 597 aa21.85■■□□□ 1.09
CDC42BPB-208ENST00000561271 SLC4A10Q6U841 1118 aa21.85■■□□□ 1.09
CDC42BPB-208ENST00000561271 MINPP1Q9UNW1 487 aa21.85■■□□□ 1.09
CDC42BPB-208ENST00000561271 MED23Q9ULK4 1368 aa21.85■■□□□ 1.09
CDC42BPB-208ENST00000561271 CSF1RP07333 972 aa21.84■■□□□ 1.09
CDC42BPB-208ENST00000561271 HIRAP54198 1017 aaPredicted RBP21.84■■□□□ 1.09
CDC42BPB-208ENST00000561271 SLFN5Q08AF3 891 aa21.84■■□□□ 1.09
CDC42BPB-208ENST00000561271 CDCA7LQ96GN5 454 aa21.84■■□□□ 1.09
CDC42BPB-208ENST00000561271 ARAP2Q8WZ64 1704 aa21.83■■□□□ 1.09
CDC42BPB-208ENST00000561271 GRM8O00222 908 aa21.83■■□□□ 1.09
CDC42BPB-208ENST00000561271 CHMP3Q9Y3E7 222 aa21.83■■□□□ 1.09
CDC42BPB-208ENST00000561271 ZNF609O15014 1411 aa21.82■■□□□ 1.08
CDC42BPB-208ENST00000561271 H7C1D1 291 aa21.82■■□□□ 1.08
CDC42BPB-208ENST00000561271 CCT4P50991 539 aaKnown RBP21.82■■□□□ 1.08
CDC42BPB-208ENST00000561271 FOXO4P98177 505 aa21.82■■□□□ 1.08
CDC42BPB-208ENST00000561271 SAMD7Q7Z3H4 446 aa21.82■■□□□ 1.08
CDC42BPB-208ENST00000561271 MRPL50Q8N5N7 158 aaKnown RBP21.82■■□□□ 1.08
CDC42BPB-208ENST00000561271 DPF2Q92785 391 aa21.82■■□□□ 1.08
CDC42BPB-208ENST00000561271 GLIS2Q9BZE0 524 aaPredicted RBP21.82■■□□□ 1.08
CDC42BPB-208ENST00000561271 EGFRP00533 1210 aa21.81■■□□□ 1.08
CDC42BPB-208ENST00000561271 RPS12P25398 132 aaKnown RBP21.81■■□□□ 1.08
CDC42BPB-208ENST00000561271 TBC1D10BQ4KMP7 808 aaPredicted RBP21.81■■□□□ 1.08
CDC42BPB-208ENST00000561271 EPHA10Q5JZY3 1008 aa21.81■■□□□ 1.08
CDC42BPB-208ENST00000561271 MPHOSPH8Q99549 860 aa21.81■■□□□ 1.08
CDC42BPB-208ENST00000561271 SRCIN1Q9C0H9 1055 aa21.81■■□□□ 1.08
CDC42BPB-208ENST00000561271 ANKRD18BA2A2Z9 1011 aa21.8■■□□□ 1.08
CDC42BPB-208ENST00000561271 ALDH1L1O75891 902 aa21.8■■□□□ 1.08
CDC42BPB-208ENST00000561271 HSPA1AP0DMV8 641 aaKnown RBP21.8■■□□□ 1.08
CDC42BPB-208ENST00000561271 HSPA1BP0DMV9 641 aaKnown RBP21.8■■□□□ 1.08
CDC42BPB-208ENST00000561271 SSH1Q8WYL5 1049 aa21.8■■□□□ 1.08
CDC42BPB-208ENST00000561271 C9orf78Q9NZ63 289 aaPredicted RBP21.8■■□□□ 1.08
CDC42BPB-208ENST00000561271 ABT1Q9ULW3 272 aaKnown RBP21.8■■□□□ 1.08
CDC42BPB-208ENST00000561271 VIL1P09327 827 aaKnown RBP21.79■■□□□ 1.08
CDC42BPB-208ENST00000561271 KLRK1P26718 216 aa21.79■■□□□ 1.08
CDC42BPB-208ENST00000561271 VEGFBP49765 207 aa21.78■■□□□ 1.08
CDC42BPB-208ENST00000561271 CHRNDQ07001 517 aa21.78■■□□□ 1.08
CDC42BPB-208ENST00000561271 IFIT5Q13325 482 aaKnown RBP21.78■■□□□ 1.08
CDC42BPB-208ENST00000561271 LMBR1LQ6UX01 489 aa21.78■■□□□ 1.08
CDC42BPB-208ENST00000561271 TXNRD3Q86VQ6 643 aa21.78■■□□□ 1.08
CDC42BPB-208ENST00000561271 ZC3H15Q8WU90 426 aaKnown RBP21.78■■□□□ 1.08
CDC42BPB-208ENST00000561271 PGAP2Q9UHJ9 254 aa21.78■■□□□ 1.08
CDC42BPB-208ENST00000561271 ZNF804BA4D1E1 1349 aa21.78■■□□□ 1.08
CDC42BPB-208ENST00000561271 RASSF10A6NK89 507 aa21.77■■□□□ 1.08
CDC42BPB-208ENST00000561271 RBM26Q5T8P6 1007 aaKnown RBP21.77■■□□□ 1.08
CDC42BPB-208ENST00000561271 RSBN1LQ6PCB5 846 aaPredicted RBP21.77■■□□□ 1.08
CDC42BPB-208ENST00000561271 ANKRD2Q9GZV1 360 aa21.77■■□□□ 1.08
CDC42BPB-208ENST00000561271 PTPRCP08575 1304 aa21.77■■□□□ 1.07
CDC42BPB-208ENST00000561271 KIF4BQ2VIQ3 1234 aa21.76■■□□□ 1.07
CDC42BPB-208ENST00000561271 CST9Q5W186 159 aa21.76■■□□□ 1.07
CDC42BPB-208ENST00000561271 PODNQ7Z5L7 613 aa21.76■■□□□ 1.07
CDC42BPB-208ENST00000561271 SUCLG2Q96I99 432 aa21.76■■□□□ 1.07
CDC42BPB-208ENST00000561271 LEMD3Q9Y2U8 911 aa21.76■■□□□ 1.07
CDC42BPB-208ENST00000561271 NBPF7P0C2Y1 421 aaPredicted RBP21.75■■□□□ 1.07
CDC42BPB-208ENST00000561271 KCNJ4P48050 445 aa21.75■■□□□ 1.07
CDC42BPB-208ENST00000561271 ZNF594Q96JF6 807 aaPredicted RBP21.75■■□□□ 1.07
CDC42BPB-208ENST00000561271 ZNF408Q9H9D4 720 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms