RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 CENPFP49454 3210 aa13.07□□□□□ -0.32
TPM1-225ENST00000560679 TCIRG1Q13488 830 aa13.07□□□□□ -0.32
TPM1-225ENST00000560679 HSP90AB3PQ58FF7 597 aa13.07□□□□□ -0.32
TPM1-225ENST00000560679 SULF1Q8IWU6 871 aa13.07□□□□□ -0.32
TPM1-225ENST00000560679 NSFL1CQ9UNZ2 370 aaKnown RBP13.07□□□□□ -0.32
TPM1-225ENST00000560679 ZNF646O15015 1829 aaPredicted RBP13.06□□□□□ -0.32
TPM1-225ENST00000560679 VIL1P09327 827 aaKnown RBP13.06□□□□□ -0.32
TPM1-225ENST00000560679 AIMP1Q12904 312 aaKnown RBP13.06□□□□□ -0.32
TPM1-225ENST00000560679 ZNF296Q8WUU4 475 aaPredicted RBP13.06□□□□□ -0.32
TPM1-225ENST00000560679 NECTIN2Q92692 538 aa13.06□□□□□ -0.32
TPM1-225ENST00000560679 C6orf229H3BNL8 230 aa13.05□□□□□ -0.32
TPM1-225ENST00000560679 ZNF280AP59817 542 aaPredicted RBP13.05□□□□□ -0.32
TPM1-225ENST00000560679 SF3B3Q15393 1217 aaKnown RBP13.05□□□□□ -0.32
TPM1-225ENST00000560679 ANGEL2Q5VTE6 544 aaKnown RBP13.05□□□□□ -0.32
TPM1-225ENST00000560679 MOB2Q70IA6 237 aa13.05□□□□□ -0.32
TPM1-225ENST00000560679 TBC1D16Q8TBP0 767 aa13.05□□□□□ -0.32
TPM1-225ENST00000560679 TBC1D8O95759 1140 aa13.04□□□□□ -0.32
TPM1-225ENST00000560679 PKN2Q16513 984 aaKnown RBP13.04□□□□□ -0.32
TPM1-225ENST00000560679 KRT24Q2M2I5 525 aa13.04□□□□□ -0.32
TPM1-225ENST00000560679 REM2Q8IYK8 340 aaPredicted RBP13.04□□□□□ -0.32
TPM1-225ENST00000560679 FAM89AQ96GI7 184 aa13.04□□□□□ -0.32
TPM1-225ENST00000560679 NEFMP07197 916 aa13.03□□□□□ -0.32
TPM1-225ENST00000560679 FKBP1BP68106 108 aa13.03□□□□□ -0.32
TPM1-225ENST00000560679 SCARF1Q14162 830 aa13.03□□□□□ -0.32
TPM1-225ENST00000560679 GMLQ99445 158 aa13.03□□□□□ -0.32
TPM1-225ENST00000560679 EYA3Q99504 573 aa13.03□□□□□ -0.32
TPM1-225ENST00000560679 ISCA1Q9BUE6 129 aa13.03□□□□□ -0.32
TPM1-225ENST00000560679 SCAF8Q9UPN6 1271 aaKnown RBP13.03□□□□□ -0.32
TPM1-225ENST00000560679 PODXL2Q9NZ53 605 aa13.02□□□□□ -0.33
TPM1-225ENST00000560679 CHPF2Q9P2E5 772 aa13.02□□□□□ -0.33
TPM1-225ENST00000560679 HDAC9Q9UKV0 1011 aa13.02□□□□□ -0.33
TPM1-225ENST00000560679 PITPNM2Q9BZ72 1349 aa13.02□□□□□ -0.33
TPM1-225ENST00000560679 RTL5Q5HYW3 569 aaPredicted RBP13.01□□□□□ -0.33
TPM1-225ENST00000560679 RSBN1LQ6PCB5 846 aaPredicted RBP13.01□□□□□ -0.33
TPM1-225ENST00000560679 FBXO46Q6PJ61 603 aaPredicted RBP13.01□□□□□ -0.33
TPM1-225ENST00000560679 R3HDMLQ9H3Y0 253 aa13.01□□□□□ -0.33
TPM1-225ENST00000560679 MAPK8IP3Q9UPT6 1336 aa13.01□□□□□ -0.33
TPM1-225ENST00000560679 RBBP6Q7Z6E9 1792 aaKnown RBP13□□□□□ -0.33
TPM1-225ENST00000560679 ATP5J2-PTCD1G3V325 749 aa13□□□□□ -0.33
TPM1-225ENST00000560679 UBE2Q2LH0YL09 131 aa13□□□□□ -0.33
TPM1-225ENST00000560679 GPR25O00155 361 aa13□□□□□ -0.33
TPM1-225ENST00000560679 UFL1O94874 794 aa13□□□□□ -0.33
TPM1-225ENST00000560679 NOM1Q5C9Z4 860 aaKnown RBP13□□□□□ -0.33
TPM1-225ENST00000560679 PRAMEF18Q5VWM3 479 aa13□□□□□ -0.33
TPM1-225ENST00000560679 AGBL3Q8NEM8 1001 aa13□□□□□ -0.33
TPM1-225ENST00000560679 MYOZ2Q9NPC6 264 aa13□□□□□ -0.33
TPM1-225ENST00000560679 BABAM1Q9NWV8 329 aa13□□□□□ -0.33
TPM1-225ENST00000560679 LAMB1P07942 1786 aa12.99□□□□□ -0.33
TPM1-225ENST00000560679 TM4SF4P48230 202 aa12.99□□□□□ -0.33
TPM1-225ENST00000560679 RPS8P62241 208 aaKnown RBP12.99□□□□□ -0.33
TPM1-225ENST00000560679 HABP4Q5JVS0 413 aaKnown RBP12.99□□□□□ -0.33
TPM1-225ENST00000560679 PLBD2Q8NHP8 589 aa12.99□□□□□ -0.33
TPM1-225ENST00000560679 ZC3H12CQ9C0D7 883 aaKnown RBP12.99□□□□□ -0.33
TPM1-225ENST00000560679 SEC31BQ9NQW1 1179 aa12.99□□□□□ -0.33
TPM1-225ENST00000560679 IRS4O14654 1257 aaPredicted RBP12.98□□□□□ -0.33
TPM1-225ENST00000560679 RIPK4P57078 832 aa12.98□□□□□ -0.33
TPM1-225ENST00000560679 MKRN3Q13064 507 aaKnown RBP12.98□□□□□ -0.33
TPM1-225ENST00000560679 GCC1Q96CN9 775 aa12.98□□□□□ -0.33
TPM1-225ENST00000560679 CFHR5Q9BXR6 569 aa12.98□□□□□ -0.33
TPM1-225ENST00000560679 GGA1Q9UJY5 639 aa12.98□□□□□ -0.33
TPM1-225ENST00000560679 SZT2Q5T011 3432 aa12.97□□□□□ -0.33
TPM1-225ENST00000560679 USP17L8P0C7I0 530 aa12.97□□□□□ -0.33
TPM1-225ENST00000560679 NBPF9Q3BBW0 867 aa12.97□□□□□ -0.33
TPM1-225ENST00000560679 SPEF2Q9C093 1822 aa12.97□□□□□ -0.33
TPM1-225ENST00000560679 POTEFA5A3E0 1075 aa12.96□□□□□ -0.33
TPM1-225ENST00000560679 FKTNO75072 461 aa12.96□□□□□ -0.33
TPM1-225ENST00000560679 TMPOP42166 694 aaKnown RBP12.96□□□□□ -0.33
TPM1-225ENST00000560679 HDGFL1Q5TGJ6 251 aa12.96□□□□□ -0.33
TPM1-225ENST00000560679 ANKRD13DQ6ZTN6 518 aa12.96□□□□□ -0.33
TPM1-225ENST00000560679 ANKIB1Q9P2G1 1089 aa12.96□□□□□ -0.33
TPM1-225ENST00000560679 WTIPA6NIX2 430 aaPredicted RBP12.95□□□□□ -0.34
TPM1-225ENST00000560679 CHL1O00533 1208 aa12.95□□□□□ -0.34
TPM1-225ENST00000560679 TRIM28Q13263 835 aaKnown RBP12.95□□□□□ -0.34
TPM1-225ENST00000560679 MXD3Q9BW11 206 aa12.95□□□□□ -0.34
TPM1-225ENST00000560679 SSC5DA1L4H1 1573 aa12.94□□□□□ -0.34
TPM1-225ENST00000560679 XDHP47989 1333 aa12.94□□□□□ -0.34
TPM1-225ENST00000560679 USP17L3A6NCW0 530 aa12.94□□□□□ -0.34
TPM1-225ENST00000560679 USP17L4A6NCW7 530 aa12.94□□□□□ -0.34
TPM1-225ENST00000560679 G3V3G9 751 aa12.94□□□□□ -0.34
TPM1-225ENST00000560679 WNT10BO00744 389 aa12.94□□□□□ -0.34
TPM1-225ENST00000560679 PTPN12Q05209 780 aaKnown RBP12.94□□□□□ -0.34
TPM1-225ENST00000560679 SREBF2Q12772 1141 aa12.94□□□□□ -0.34
TPM1-225ENST00000560679 DACT2Q5SW24 774 aa12.94□□□□□ -0.34
TPM1-225ENST00000560679 DCAF8Q5TAQ9 597 aa12.94□□□□□ -0.34
TPM1-225ENST00000560679 USP17L1Q7RTZ2 530 aa12.94□□□□□ -0.34
TPM1-225ENST00000560679 ZBTB38Q8NAP3 1195 aaPredicted RBP12.94□□□□□ -0.34
TPM1-225ENST00000560679 PNNQ9H307 717 aaKnown RBP12.94□□□□□ -0.34
TPM1-225ENST00000560679 HOXB7P09629 217 aa12.93□□□□□ -0.34
TPM1-225ENST00000560679 FXR1P51114 621 aaKnown RBP eCLIP12.93□□□□□ -0.34
TPM1-225ENST00000560679 TTLL12Q14166 644 aaPredicted RBP12.93□□□□□ -0.34
TPM1-225ENST00000560679 OTOP1Q7RTM1 612 aa12.93□□□□□ -0.34
TPM1-225ENST00000560679 CCDC85AQ96PX6 553 aaPredicted RBP12.93□□□□□ -0.34
TPM1-225ENST00000560679 DBF4Q9UBU7 674 aaPredicted RBP12.93□□□□□ -0.34
TPM1-225ENST00000560679 KIAA0100Q14667 2235 aaKnown RBP12.93□□□□□ -0.34
TPM1-225ENST00000560679 MED23Q9ULK4 1368 aa12.93□□□□□ -0.34
TPM1-225ENST00000560679 SASH1O94885 1247 aa12.92□□□□□ -0.34
TPM1-225ENST00000560679 LMOD3Q0VAK6 560 aa12.92□□□□□ -0.34
TPM1-225ENST00000560679 CCDC152Q4G0S7 254 aa12.92□□□□□ -0.34
TPM1-225ENST00000560679 LDLRAD1Q5T700 205 aa12.92□□□□□ -0.34
TPM1-225ENST00000560679 SPRYD7Q5W111 196 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms