RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 PFKFB2O60825 505 aa20.89■□□□□ 0.94
TRPM1-211ENST00000560658 CIAO1O76071 339 aa20.89■□□□□ 0.94
TRPM1-211ENST00000560658 TYRO3Q06418 890 aa20.89■□□□□ 0.93
TRPM1-211ENST00000560658 DHX32Q7L7V1 743 aaKnown RBP20.89■□□□□ 0.93
TRPM1-211ENST00000560658 FBXL16Q8N461 479 aa20.89■□□□□ 0.93
TRPM1-211ENST00000560658 MYRIPQ8NFW9 859 aa20.89■□□□□ 0.93
TRPM1-211ENST00000560658 H3BQV1 296 aa20.88■□□□□ 0.93
TRPM1-211ENST00000560658 CYP27B1O15528 508 aa20.88■□□□□ 0.93
TRPM1-211ENST00000560658 RESTQ13127 1097 aa20.88■□□□□ 0.93
TRPM1-211ENST00000560658 IFFO2Q5TF58 517 aa20.88■□□□□ 0.93
TRPM1-211ENST00000560658 RGS22Q8NE09 1264 aa20.88■□□□□ 0.93
TRPM1-211ENST00000560658 KLHDC4Q8TBB5 520 aa20.88■□□□□ 0.93
TRPM1-211ENST00000560658 AGXT2Q9BYV1 514 aa20.88■□□□□ 0.93
TRPM1-211ENST00000560658 CWC25Q9NXE8 425 aaPredicted RBP20.88■□□□□ 0.93
TRPM1-211ENST00000560658 ERVV-2B6SEH9 535 aa20.87■□□□□ 0.93
TRPM1-211ENST00000560658 GTF2F1P35269 517 aaKnown RBP eCLIP20.87■□□□□ 0.93
TRPM1-211ENST00000560658 Q6ZUG5 572 aa20.87■□□□□ 0.93
TRPM1-211ENST00000560658 DBNDD2Q9BQY9 259 aa20.87■□□□□ 0.93
TRPM1-211ENST00000560658 GLI3P10071 1580 aa20.87■□□□□ 0.93
TRPM1-211ENST00000560658 HSP90B1P14625 803 aaKnown RBP20.86■□□□□ 0.93
TRPM1-211ENST00000560658 DNTTIP2Q5QJE6 756 aaKnown RBP20.86■□□□□ 0.93
TRPM1-211ENST00000560658 CCDC191Q8NCU4 936 aa20.86■□□□□ 0.93
TRPM1-211ENST00000560658 ABCC12Q96J65 1359 aa20.86■□□□□ 0.93
TRPM1-211ENST00000560658 CYP21A2P08686 494 aa20.86■□□□□ 0.93
TRPM1-211ENST00000560658 FOXO4P98177 505 aa20.86■□□□□ 0.93
TRPM1-211ENST00000560658 ZMYM1Q5SVZ6 1142 aa20.86■□□□□ 0.93
TRPM1-211ENST00000560658 LMBR1LQ6UX01 489 aa20.86■□□□□ 0.93
TRPM1-211ENST00000560658 CADPS2Q86UW7 1296 aa20.86■□□□□ 0.93
TRPM1-211ENST00000560658 ZNF396Q96N95 335 aaPredicted RBP20.86■□□□□ 0.93
TRPM1-211ENST00000560658 DNAJC2Q99543 621 aaKnown RBP20.86■□□□□ 0.93
TRPM1-211ENST00000560658 PAG1Q9NWQ8 432 aa20.86■□□□□ 0.93
TRPM1-211ENST00000560658 MRVI1Q9Y6F6 885 aa20.86■□□□□ 0.93
TRPM1-211ENST00000560658 PCDH11XQ9BZA7 1347 aa20.85■□□□□ 0.93
TRPM1-211ENST00000560658 PCDH11YQ9BZA8 1340 aa20.85■□□□□ 0.93
TRPM1-211ENST00000560658 LIG1P18858 919 aa20.85■□□□□ 0.93
TRPM1-211ENST00000560658 FGD1P98174 961 aa20.85■□□□□ 0.93
TRPM1-211ENST00000560658 FERMT3Q86UX7 667 aa20.85■□□□□ 0.93
TRPM1-211ENST00000560658 TDRD7Q8NHU6 1098 aaKnown RBP20.85■□□□□ 0.93
TRPM1-211ENST00000560658 DDX54Q8TDD1 881 aaKnown RBP20.85■□□□□ 0.93
TRPM1-211ENST00000560658 BRF1Q92994 677 aa20.85■□□□□ 0.93
TRPM1-211ENST00000560658 DACT1Q9NYF0 836 aa20.85■□□□□ 0.93
TRPM1-211ENST00000560658 ZNF274Q96GC6 653 aaPredicted RBP20.84■□□□□ 0.93
TRPM1-211ENST00000560658 ZFYP08048 801 aaPredicted RBP20.83■□□□□ 0.93
TRPM1-211ENST00000560658 CHAF1AQ13111 956 aaPredicted RBP20.83■□□□□ 0.93
TRPM1-211ENST00000560658 KIAA1524Q8TCG1 905 aa20.83■□□□□ 0.93
TRPM1-211ENST00000560658 BICD2Q8TD16 824 aa20.83■□□□□ 0.93
TRPM1-211ENST00000560658 CTNNA3Q9UI47 895 aa20.83■□□□□ 0.93
TRPM1-211ENST00000560658 EYA2O00167 538 aa20.82■□□□□ 0.92
TRPM1-211ENST00000560658 CDC25BP30305 580 aa20.82■□□□□ 0.92
TRPM1-211ENST00000560658 EXOSC10Q01780 885 aaKnown RBP20.82■□□□□ 0.92
TRPM1-211ENST00000560658 ATG9AQ7Z3C6 839 aa20.82■□□□□ 0.92
TRPM1-211ENST00000560658 RCOR1Q9UKL0 485 aa20.82■□□□□ 0.92
TRPM1-211ENST00000560658 SPATA31A3Q5VYP0 1347 aa20.82■□□□□ 0.92
TRPM1-211ENST00000560658 STK3Q13188 491 aa20.82■□□□□ 0.92
TRPM1-211ENST00000560658 NKX1-1Q15270 411 aaPredicted RBP20.82■□□□□ 0.92
TRPM1-211ENST00000560658 TTC12Q9H892 705 aaPredicted RBP20.82■□□□□ 0.92
TRPM1-211ENST00000560658 AKAP2Q9Y2D5 859 aa20.82■□□□□ 0.92
TRPM1-211ENST00000560658 TAF6LQ9Y6J9 622 aa20.82■□□□□ 0.92
TRPM1-211ENST00000560658 NUP188Q5SRE5 1749 aa20.81■□□□□ 0.92
TRPM1-211ENST00000560658 UBR2Q8IWV8 1755 aa20.81■□□□□ 0.92
TRPM1-211ENST00000560658 UBAP1LF5GYI3 381 aa20.81■□□□□ 0.92
TRPM1-211ENST00000560658 RNF113AO15541 343 aaKnown RBP20.81■□□□□ 0.92
TRPM1-211ENST00000560658 EDC3Q96F86 508 aaKnown RBP20.81■□□□□ 0.92
TRPM1-211ENST00000560658 TCEANC2Q96MN5 208 aa20.81■□□□□ 0.92
TRPM1-211ENST00000560658 ATP5J2-PTCD1G3V325 749 aa20.8■□□□□ 0.92
TRPM1-211ENST00000560658 PTCD1O75127 700 aaKnown RBP20.8■□□□□ 0.92
TRPM1-211ENST00000560658 EVCP57679 992 aa20.8■□□□□ 0.92
TRPM1-211ENST00000560658 SCRN1Q12765 414 aa20.8■□□□□ 0.92
TRPM1-211ENST00000560658 DDX46Q7L014 1031 aaKnown RBP20.8■□□□□ 0.92
TRPM1-211ENST00000560658 NSUN7Q8NE18 718 aaKnown RBP20.8■□□□□ 0.92
TRPM1-211ENST00000560658 CBX8Q9HC52 389 aa20.8■□□□□ 0.92
TRPM1-211ENST00000560658 PAPPAQ13219 1627 aa20.8■□□□□ 0.92
TRPM1-211ENST00000560658 ANO6Q4KMQ2 910 aa20.79■□□□□ 0.92
TRPM1-211ENST00000560658 SARM1Q6SZW1 724 aa20.79■□□□□ 0.92
TRPM1-211ENST00000560658 WDR19Q8NEZ3 1342 aa20.79■□□□□ 0.92
TRPM1-211ENST00000560658 NEMFO60524 1076 aa20.78■□□□□ 0.92
TRPM1-211ENST00000560658 JAK2O60674 1132 aa20.78■□□□□ 0.92
TRPM1-211ENST00000560658 IFIT1P09914 478 aaKnown RBP20.78■□□□□ 0.92
TRPM1-211ENST00000560658 PLCB2Q00722 1185 aa20.78■□□□□ 0.92
TRPM1-211ENST00000560658 TRIM28Q13263 835 aaKnown RBP20.78■□□□□ 0.92
TRPM1-211ENST00000560658 PLA2G4DQ86XP0 818 aa20.78■□□□□ 0.92
TRPM1-211ENST00000560658 PGBD1Q96JS3 809 aa20.78■□□□□ 0.92
TRPM1-211ENST00000560658 TFIP11Q9UBB9 837 aaKnown RBP20.78■□□□□ 0.92
TRPM1-211ENST00000560658 GOLIM4O00461 696 aa20.78■□□□□ 0.92
TRPM1-211ENST00000560658 DHX16O60231 1041 aaKnown RBP20.78■□□□□ 0.92
TRPM1-211ENST00000560658 ZCRB1Q8TBF4 217 aaKnown RBP20.78■□□□□ 0.92
TRPM1-211ENST00000560658 NEUROD6Q96NK8 337 aa20.78■□□□□ 0.92
TRPM1-211ENST00000560658 TNS2Q63HR2 1409 aa20.77■□□□□ 0.92
TRPM1-211ENST00000560658 WDR17Q8IZU2 1322 aa20.77■□□□□ 0.92
TRPM1-211ENST00000560658 SALL1Q9NSC2 1324 aa20.77■□□□□ 0.92
TRPM1-211ENST00000560658 NBPF26B4DH59 902 aa20.77■□□□□ 0.92
TRPM1-211ENST00000560658 ZNF165P49910 485 aa20.77■□□□□ 0.92
TRPM1-211ENST00000560658 ZNF75DP51815 510 aa20.77■□□□□ 0.92
TRPM1-211ENST00000560658 NBPF14Q5TI25 921 aa20.77■□□□□ 0.92
TRPM1-211ENST00000560658 NBPF10Q6P3W6 841 aaKnown RBP20.77■□□□□ 0.92
TRPM1-211ENST00000560658 CCDC73Q6ZRK6 1079 aa20.77■□□□□ 0.92
TRPM1-211ENST00000560658 CCDC129Q6ZRS4 1044 aa20.77■□□□□ 0.92
TRPM1-211ENST00000560658 NBPF15Q8N660 670 aa20.77■□□□□ 0.92
TRPM1-211ENST00000560658 FAM13BQ9NYF5 915 aa20.77■□□□□ 0.92
TRPM1-211ENST00000560658 CEP126Q9P2H0 1117 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms