RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 YDJCA8MPS7 323 aa19.31■□□□□ 0.68
SNRPA1-210ENST00000560383 F6X3S4 739 aa19.31■□□□□ 0.68
SNRPA1-210ENST00000560383 MRPL50Q8N5N7 158 aaKnown RBP19.31■□□□□ 0.68
SNRPA1-210ENST00000560383 EYA3Q99504 573 aa19.31■□□□□ 0.68
SNRPA1-210ENST00000560383 PLA2G12BQ9BX93 195 aa19.31■□□□□ 0.68
SNRPA1-210ENST00000560383 PODXL2Q9NZ53 605 aa19.31■□□□□ 0.68
SNRPA1-210ENST00000560383 NSFL1CQ9UNZ2 370 aaKnown RBP19.31■□□□□ 0.68
SNRPA1-210ENST00000560383 RAD17O75943 681 aa19.3■□□□□ 0.68
SNRPA1-210ENST00000560383 CT47B1P0C2W7 299 aaPredicted RBP19.3■□□□□ 0.68
SNRPA1-210ENST00000560383 CTSWP56202 376 aa19.3■□□□□ 0.68
SNRPA1-210ENST00000560383 PPP4R3CPQ6ZMV5 832 aa19.3■□□□□ 0.68
SNRPA1-210ENST00000560383 TTLL11Q8NHH1 800 aa19.3■□□□□ 0.68
SNRPA1-210ENST00000560383 SEC31BQ9NQW1 1179 aa19.3■□□□□ 0.68
SNRPA1-210ENST00000560383 RTL9Q8NET4 1388 aa19.3■□□□□ 0.68
SNRPA1-210ENST00000560383 VEGFBP49765 207 aa19.29■□□□□ 0.68
SNRPA1-210ENST00000560383 GPSM2P81274 684 aa19.29■□□□□ 0.68
SNRPA1-210ENST00000560383 ALDH1L2Q3SY69 923 aa19.29■□□□□ 0.68
SNRPA1-210ENST00000560383 UBE3BQ7Z3V4 1068 aa19.29■□□□□ 0.68
SNRPA1-210ENST00000560383 ZC3H15Q8WU90 426 aaKnown RBP19.29■□□□□ 0.68
SNRPA1-210ENST00000560383 SSH1Q8WYL5 1049 aa19.29■□□□□ 0.68
SNRPA1-210ENST00000560383 BCL2L13Q9BXK5 485 aa19.29■□□□□ 0.68
SNRPA1-210ENST00000560383 POLLQ9UGP5 575 aa19.29■□□□□ 0.68
SNRPA1-210ENST00000560383 PGAP2Q9UHJ9 254 aa19.29■□□□□ 0.68
SNRPA1-210ENST00000560383 PSME4Q14997 1843 aa19.29■□□□□ 0.68
SNRPA1-210ENST00000560383 DEFB115Q30KQ5 88 aa19.28■□□□□ 0.68
SNRPA1-210ENST00000560383 TBC1D16Q8TBP0 767 aa19.28■□□□□ 0.68
SNRPA1-210ENST00000560383 DPF2Q92785 391 aa19.28■□□□□ 0.68
SNRPA1-210ENST00000560383 PTPRCP08575 1304 aa19.27■□□□□ 0.68
SNRPA1-210ENST00000560383 ZNF609O15014 1411 aa19.27■□□□□ 0.68
SNRPA1-210ENST00000560383 C6orf229H3BNL8 230 aa19.27■□□□□ 0.68
SNRPA1-210ENST00000560383 SCN9AQ15858 1988 aa19.26■□□□□ 0.67
SNRPA1-210ENST00000560383 ALDH1L1O75891 902 aa19.26■□□□□ 0.67
SNRPA1-210ENST00000560383 CSF1RP07333 972 aa19.26■□□□□ 0.67
SNRPA1-210ENST00000560383 RPS12P25398 132 aaKnown RBP19.26■□□□□ 0.67
SNRPA1-210ENST00000560383 DBNDD1Q9H9R9 158 aa19.26■□□□□ 0.67
SNRPA1-210ENST00000560383 CNOT7Q9UIV1 285 aaKnown RBP19.26■□□□□ 0.67
SNRPA1-210ENST00000560383 ABT1Q9ULW3 272 aaKnown RBP19.26■□□□□ 0.67
SNRPA1-210ENST00000560383 SPEF2Q9C093 1822 aa19.25■□□□□ 0.67
SNRPA1-210ENST00000560383 PSMD14O00487 310 aa19.25■□□□□ 0.67
SNRPA1-210ENST00000560383 ECE2O60344 883 aa19.25■□□□□ 0.67
SNRPA1-210ENST00000560383 CCDC85AQ96PX6 553 aaPredicted RBP19.25■□□□□ 0.67
SNRPA1-210ENST00000560383 CDC5LQ99459 802 aaKnown RBP19.25■□□□□ 0.67
SNRPA1-210ENST00000560383 GREM2Q9H772 168 aa19.25■□□□□ 0.67
SNRPA1-210ENST00000560383 H7C1D1 291 aa19.24■□□□□ 0.67
SNRPA1-210ENST00000560383 TRAF5O00463 557 aa19.24■□□□□ 0.67
SNRPA1-210ENST00000560383 RIMBP2O15034 1052 aa19.24■□□□□ 0.67
SNRPA1-210ENST00000560383 BRPF1P55201 1214 aaPredicted RBP19.24■□□□□ 0.67
SNRPA1-210ENST00000560383 CST9Q5W186 159 aa19.24■□□□□ 0.67
SNRPA1-210ENST00000560383 ANKRD18AQ8IVF6 992 aa19.24■□□□□ 0.67
SNRPA1-210ENST00000560383 MICALL2Q8IY33 904 aa19.24■□□□□ 0.67
SNRPA1-210ENST00000560383 TNS4Q8IZW8 715 aa19.24■□□□□ 0.67
SNRPA1-210ENST00000560383 TRPM4Q8TD43 1214 aa19.24■□□□□ 0.67
SNRPA1-210ENST00000560383 ZC3H12CQ9C0D7 883 aaKnown RBP19.24■□□□□ 0.67
SNRPA1-210ENST00000560383 ANKIB1Q9P2G1 1089 aa19.24■□□□□ 0.67
SNRPA1-210ENST00000560383 GGA1Q9UJY5 639 aa19.24■□□□□ 0.67
SNRPA1-210ENST00000560383 XDHP47989 1333 aa19.24■□□□□ 0.67
SNRPA1-210ENST00000560383 WDR33Q9C0J8 1336 aaKnown RBP19.24■□□□□ 0.67
SNRPA1-210ENST00000560383 GRM8O00222 908 aa19.23■□□□□ 0.67
SNRPA1-210ENST00000560383 FOXN1O15353 648 aa19.23■□□□□ 0.67
SNRPA1-210ENST00000560383 UFL1O94874 794 aa19.23■□□□□ 0.67
SNRPA1-210ENST00000560383 HIRAP54198 1017 aaPredicted RBP19.23■□□□□ 0.67
SNRPA1-210ENST00000560383 AIDAQ96BJ3 306 aa19.23■□□□□ 0.67
SNRPA1-210ENST00000560383 SRCIN1Q9C0H9 1055 aa19.23■□□□□ 0.67
SNRPA1-210ENST00000560383 WBP1LQ9NX94 342 aa19.23■□□□□ 0.67
SNRPA1-210ENST00000560383 TLL2Q9Y6L7 1015 aa19.23■□□□□ 0.67
SNRPA1-210ENST00000560383 ECE1P42892 770 aa19.22■□□□□ 0.67
SNRPA1-210ENST00000560383 FOXO4P98177 505 aa19.22■□□□□ 0.67
SNRPA1-210ENST00000560383 FMR1Q06787 632 aaKnown RBP eCLIP19.22■□□□□ 0.67
SNRPA1-210ENST00000560383 SLC4A10Q6U841 1118 aa19.22■□□□□ 0.67
SNRPA1-210ENST00000560383 PRDM10Q9NQV6 1147 aa19.22■□□□□ 0.67
SNRPA1-210ENST00000560383 BSDC1Q9NW68 430 aaPredicted RBP19.22■□□□□ 0.67
SNRPA1-210ENST00000560383 ZBTB12Q9Y330 459 aaPredicted RBP19.22■□□□□ 0.67
SNRPA1-210ENST00000560383 CTCFP49711 727 aaPredicted RBP19.21■□□□□ 0.67
SNRPA1-210ENST00000560383 MAP2K1Q02750 393 aaPredicted RBP19.21■□□□□ 0.67
SNRPA1-210ENST00000560383 CDC37L1Q7L3B6 337 aa19.21■□□□□ 0.67
SNRPA1-210ENST00000560383 HHIPL1Q96JK4 782 aa19.21■□□□□ 0.67
SNRPA1-210ENST00000560383 GLIS2Q9BZE0 524 aaPredicted RBP19.21■□□□□ 0.67
SNRPA1-210ENST00000560383 SMC4Q9NTJ3 1288 aa19.21■□□□□ 0.67
SNRPA1-210ENST00000560383 UTYO14607 1347 aa19.21■□□□□ 0.67
SNRPA1-210ENST00000560383 SHTN1A0MZ66 631 aa19.2■□□□□ 0.66
SNRPA1-210ENST00000560383 VIL1P09327 827 aaKnown RBP19.2■□□□□ 0.66
SNRPA1-210ENST00000560383 DOK7Q18PE1 504 aa19.2■□□□□ 0.66
SNRPA1-210ENST00000560383 FAM161AQ3B820 660 aa19.2■□□□□ 0.66
SNRPA1-210ENST00000560383 CAPNS2Q96L46 248 aa19.2■□□□□ 0.66
SNRPA1-210ENST00000560383 GPR101Q96P66 508 aaPredicted RBP19.2■□□□□ 0.66
SNRPA1-210ENST00000560383 CELF2O95319 508 aaKnown RBP19.19■□□□□ 0.66
SNRPA1-210ENST00000560383 ITGA6P23229 1130 aa19.19■□□□□ 0.66
SNRPA1-210ENST00000560383 ATP2B4P23634 1241 aa19.19■□□□□ 0.66
SNRPA1-210ENST00000560383 HNRNPUQ00839 825 aaKnown RBP eCLIP19.19■□□□□ 0.66
SNRPA1-210ENST00000560383 SAPCD2Q86UD0 394 aa19.19■□□□□ 0.66
SNRPA1-210ENST00000560383 C9orf78Q9NZ63 289 aaPredicted RBP19.19■□□□□ 0.66
SNRPA1-210ENST00000560383 MED23Q9ULK4 1368 aa19.19■□□□□ 0.66
SNRPA1-210ENST00000560383 ZNF646O15015 1829 aaPredicted RBP19.18■□□□□ 0.66
SNRPA1-210ENST00000560383 G3V3G9 751 aa19.18■□□□□ 0.66
SNRPA1-210ENST00000560383 RARSP54136 660 aaKnown RBP19.18■□□□□ 0.66
SNRPA1-210ENST00000560383 EPHA10Q5JZY3 1008 aa19.18■□□□□ 0.66
SNRPA1-210ENST00000560383 DCAF8Q5TAQ9 597 aa19.18■□□□□ 0.66
SNRPA1-210ENST00000560383 KCNQ5Q9NR82 932 aa19.18■□□□□ 0.66
SNRPA1-210ENST00000560383 MINPP1Q9UNW1 487 aa19.18■□□□□ 0.66
SNRPA1-210ENST00000560383 IGHMBP2P38935 993 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms