RNA–Protein interactions for RNA: ENST00000560107.6

LRRC49-221, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 2,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-221ENST00000560107 FOSBP53539 338 aa6.03□□□□□ -1.44
LRRC49-221ENST00000560107 RBM6P78332 1123 aaKnown RBP6.03□□□□□ -1.44
LRRC49-221ENST00000560107 PTPN14Q15678 1187 aa6.03□□□□□ -1.44
LRRC49-221ENST00000560107 SARM1Q6SZW1 724 aa6.03□□□□□ -1.44
LRRC49-221ENST00000560107 MPRIPQ6WCQ1 1025 aa6.03□□□□□ -1.44
LRRC49-221ENST00000560107 KLHDC4Q8TBB5 520 aa6.03□□□□□ -1.44
LRRC49-221ENST00000560107 GTF3C6Q969F1 213 aa6.03□□□□□ -1.44
LRRC49-221ENST00000560107 BICC1Q9H694 974 aaKnown RBP6.03□□□□□ -1.44
LRRC49-221ENST00000560107 DBF4Q9UBU7 674 aaPredicted RBP6.03□□□□□ -1.44
LRRC49-221ENST00000560107 KDM3BQ7LBC6 1761 aa6.03□□□□□ -1.44
LRRC49-221ENST00000560107 PRAMEF22A3QJZ6 481 aa6.03□□□□□ -1.44
LRRC49-221ENST00000560107 CCDC69A6NI79 296 aa6.03□□□□□ -1.44
LRRC49-221ENST00000560107 GIGYF1O75420 1035 aaPredicted RBP6.03□□□□□ -1.44
LRRC49-221ENST00000560107 ALDH1L1O75891 902 aa6.03□□□□□ -1.44
LRRC49-221ENST00000560107 GABPB1Q06547 395 aaPredicted RBP6.03□□□□□ -1.44
LRRC49-221ENST00000560107 TEFQ10587 303 aa6.03□□□□□ -1.44
LRRC49-221ENST00000560107 KSR2Q6VAB6 950 aa6.03□□□□□ -1.44
LRRC49-221ENST00000560107 Q6ZUG5 572 aa6.03□□□□□ -1.44
LRRC49-221ENST00000560107 NYAP1Q6ZVC0 841 aa6.03□□□□□ -1.44
LRRC49-221ENST00000560107 CCAR1Q8IX12 1150 aaKnown RBP6.03□□□□□ -1.44
LRRC49-221ENST00000560107 ABTB2Q8N961 1025 aa6.03□□□□□ -1.44
LRRC49-221ENST00000560107 ERCC4Q92889 916 aaPredicted RBP6.03□□□□□ -1.44
LRRC49-221ENST00000560107 MRFAP1L1Q96HT8 127 aa6.03□□□□□ -1.44
LRRC49-221ENST00000560107 LRRC2Q9BYS8 371 aa6.03□□□□□ -1.44
LRRC49-221ENST00000560107 GOLPH3LQ9H4A5 285 aa6.03□□□□□ -1.44
LRRC49-221ENST00000560107 SETD1BQ9UPS6 1966 aaKnown RBP6.03□□□□□ -1.44
LRRC49-221ENST00000560107 MARF1Q9Y4F3 1742 aaKnown RBP6.02□□□□□ -1.45
LRRC49-221ENST00000560107 COL15A1P39059 1388 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 BECN2A8MW95 431 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 CAVIN2O95810 425 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 ADD1P35611 737 aaKnown RBP6.02□□□□□ -1.45
LRRC49-221ENST00000560107 CCZ1BP86790 482 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 CCZ1P86791 482 aaPredicted RBP6.02□□□□□ -1.45
LRRC49-221ENST00000560107 SETQ01105 290 aaPredicted RBP6.02□□□□□ -1.45
LRRC49-221ENST00000560107 STX1AQ16623 288 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 NBPF6Q5VWK0 638 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 DHX40Q8IX18 779 aaKnown RBP6.02□□□□□ -1.45
LRRC49-221ENST00000560107 ZNF397Q8NF99 534 aaPredicted RBP6.02□□□□□ -1.45
LRRC49-221ENST00000560107 FBXW7Q969H0 707 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 NBPF4Q96M43 638 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 NEK1Q96PY6 1258 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 HMG20BQ9P0W2 317 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 CFAP45Q9UL16 551 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 HDAC5Q9UQL6 1122 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 NDUFB9Q9Y6M9 179 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 MED1Q15648 1581 aaPredicted RBP6.02□□□□□ -1.45
LRRC49-221ENST00000560107 JCADQ9P266 1359 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 PLEKHG1Q9ULL1 1385 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 GRM8O00222 908 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 NPHP1O15259 732 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 NEMFO60524 1076 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 PPFIA3O75145 1194 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 SCRN1Q12765 414 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 AIMP1Q12904 312 aaKnown RBP6.02□□□□□ -1.45
LRRC49-221ENST00000560107 SNW1Q13573 536 aaKnown RBP6.02□□□□□ -1.45
LRRC49-221ENST00000560107 ELF2Q15723 593 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 TSGA10IPQ3SY00 556 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 CYB5RLQ6IPT4 315 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 CCDC129Q6ZRS4 1044 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 GPATCH11Q8N954 259 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 SEC62Q99442 399 aaKnown RBP6.02□□□□□ -1.45
LRRC49-221ENST00000560107 DNAJC2Q99543 621 aaKnown RBP6.02□□□□□ -1.45
LRRC49-221ENST00000560107 ZSCAN16Q9H4T2 348 aaPredicted RBP6.02□□□□□ -1.45
LRRC49-221ENST00000560107 TMEM51Q9NW97 253 aa6.02□□□□□ -1.45
LRRC49-221ENST00000560107 DIP2AQ14689 1571 aa6.01□□□□□ -1.45
LRRC49-221ENST00000560107 TERF2Q15554 542 aa6.01□□□□□ -1.45
LRRC49-221ENST00000560107 USPL1Q5W0Q7 1092 aa6.01□□□□□ -1.45
LRRC49-221ENST00000560107 FBXO38Q6PIJ6 1188 aa6.01□□□□□ -1.45
LRRC49-221ENST00000560107 CCAR2Q8N163 923 aaKnown RBP6.01□□□□□ -1.45
LRRC49-221ENST00000560107 SYTL4Q96C24 671 aaPredicted RBP6.01□□□□□ -1.45
LRRC49-221ENST00000560107 RCOR1Q9UKL0 485 aa6.01□□□□□ -1.45
LRRC49-221ENST00000560107 ERBB3P21860 1342 aa6.01□□□□□ -1.45
LRRC49-221ENST00000560107 VGLL3A8MV65 326 aa6.01□□□□□ -1.45
LRRC49-221ENST00000560107 CTAGE5O15320 804 aa6.01□□□□□ -1.45
LRRC49-221ENST00000560107 CYP21A2P08686 494 aa6.01□□□□□ -1.45
LRRC49-221ENST00000560107 KRT32Q14532 448 aa6.01□□□□□ -1.45
LRRC49-221ENST00000560107 ZNF530Q6P9A1 599 aaPredicted RBP6.01□□□□□ -1.45
LRRC49-221ENST00000560107 KRT222Q8N1A0 295 aa6.01□□□□□ -1.45
LRRC49-221ENST00000560107 AOPEPQ8N6M6 819 aa6.01□□□□□ -1.45
LRRC49-221ENST00000560107 LINS1Q8NG48 757 aa6.01□□□□□ -1.45
LRRC49-221ENST00000560107 ZNF622Q969S3 477 aaKnown RBP eCLIP6.01□□□□□ -1.45
LRRC49-221ENST00000560107 ERO1AQ96HE7 468 aa6.01□□□□□ -1.45
LRRC49-221ENST00000560107 USP28Q96RU2 1077 aa6.01□□□□□ -1.45
LRRC49-221ENST00000560107 KINO60870 393 aaKnown RBP6□□□□□ -1.45
LRRC49-221ENST00000560107 SLU7O95391 586 aaKnown RBP6□□□□□ -1.45
LRRC49-221ENST00000560107 CTDNEP1O95476 244 aa6□□□□□ -1.45
LRRC49-221ENST00000560107 TRHP20396 242 aaPredicted RBP6□□□□□ -1.45
LRRC49-221ENST00000560107 MMP14P50281 582 aa6□□□□□ -1.45
LRRC49-221ENST00000560107 GUCY1B3Q02153 619 aa6□□□□□ -1.45
LRRC49-221ENST00000560107 CCDC73Q6ZRK6 1079 aa6□□□□□ -1.45
LRRC49-221ENST00000560107 STOX1Q6ZVD7 989 aa6□□□□□ -1.45
LRRC49-221ENST00000560107 NBPF11Q86T75 865 aa6□□□□□ -1.45
LRRC49-221ENST00000560107 ENGASEQ8NFI3 743 aa6□□□□□ -1.45
LRRC49-221ENST00000560107 SMARCC2Q8TAQ2 1214 aa6□□□□□ -1.45
LRRC49-221ENST00000560107 LRRC59Q96AG4 307 aaKnown RBP6□□□□□ -1.45
LRRC49-221ENST00000560107 ST7Q9NRC1 585 aa6□□□□□ -1.45
LRRC49-221ENST00000560107 ANO10Q9NW15 660 aa6□□□□□ -1.45
LRRC49-221ENST00000560107 ZNF446Q9NWS9 450 aa6□□□□□ -1.45
LRRC49-221ENST00000560107 FAM53CQ9NYF3 392 aa6□□□□□ -1.45
LRRC49-221ENST00000560107 MYH15Q9Y2K3 1946 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms