RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 HMGB1P09429 215 aaKnown RBP9.64□□□□□ -0.87
SMAD3-212ENST00000559937 GJB2P29033 226 aa9.64□□□□□ -0.87
SMAD3-212ENST00000559937 ZMYM1Q5SVZ6 1142 aa9.64□□□□□ -0.87
SMAD3-212ENST00000559937 ZNF589Q86UQ0 364 aaPredicted RBP9.64□□□□□ -0.87
SMAD3-212ENST00000559937 CCDC83Q8IWF9 413 aa9.64□□□□□ -0.87
SMAD3-212ENST00000559937 PIGBQ92521 554 aa9.64□□□□□ -0.87
SMAD3-212ENST00000559937 CDCA7Q9BWT1 371 aaPredicted RBP9.64□□□□□ -0.87
SMAD3-212ENST00000559937 PAG1Q9NWQ8 432 aa9.64□□□□□ -0.87
SMAD3-212ENST00000559937 TMEM63CQ9P1W3 806 aa9.64□□□□□ -0.87
SMAD3-212ENST00000559937 CEP126Q9P2H0 1117 aa9.64□□□□□ -0.87
SMAD3-212ENST00000559937 CHMP3Q9Y3E7 222 aa9.64□□□□□ -0.87
SMAD3-212ENST00000559937 BCORQ6W2J9 1755 aa9.64□□□□□ -0.87
SMAD3-212ENST00000559937 KAT6BQ8WYB5 2073 aa9.63□□□□□ -0.87
SMAD3-212ENST00000559937 CHD4Q14839 1912 aa9.63□□□□□ -0.87
SMAD3-212ENST00000559937 ZFYP08048 801 aaPredicted RBP9.63□□□□□ -0.87
SMAD3-212ENST00000559937 CPA1P15085 419 aa9.63□□□□□ -0.87
SMAD3-212ENST00000559937 RXRBP28702 533 aa9.63□□□□□ -0.87
SMAD3-212ENST00000559937 ME3Q16798 604 aa9.63□□□□□ -0.87
SMAD3-212ENST00000559937 CCDC57Q2TAC2 916 aa9.63□□□□□ -0.87
SMAD3-212ENST00000559937 DNAJC10Q8IXB1 793 aa9.63□□□□□ -0.87
SMAD3-212ENST00000559937 ZBTB38Q8NAP3 1195 aaPredicted RBP9.63□□□□□ -0.87
SMAD3-212ENST00000559937 CHMP4CQ96CF2 233 aa9.63□□□□□ -0.87
SMAD3-212ENST00000559937 ARXQ96QS3 562 aa9.63□□□□□ -0.87
SMAD3-212ENST00000559937 DNAJC2Q99543 621 aaKnown RBP9.63□□□□□ -0.87
SMAD3-212ENST00000559937 BTG4Q9NY30 223 aa9.63□□□□□ -0.87
SMAD3-212ENST00000559937 COL5A3P25940 1745 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-212ENST00000559937 A0A1B0GUL7 405 aa9.62□□□□□ -0.87
SMAD3-212ENST00000559937 ERVV-1B6SEH8 477 aa9.62□□□□□ -0.87
SMAD3-212ENST00000559937 ADAMTS2O95450 1211 aa9.62□□□□□ -0.87
SMAD3-212ENST00000559937 IFIT1P09914 478 aaKnown RBP9.62□□□□□ -0.87
SMAD3-212ENST00000559937 UBE2HP62256 183 aa9.62□□□□□ -0.87
SMAD3-212ENST00000559937 ST3GAL1Q11201 340 aa9.62□□□□□ -0.87
SMAD3-212ENST00000559937 TOB2Q14106 344 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-212ENST00000559937 HS1BP3Q53T59 392 aa9.62□□□□□ -0.87
SMAD3-212ENST00000559937 FOXD4L5Q5VV16 416 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-212ENST00000559937 USP48Q86UV5 1035 aa9.62□□□□□ -0.87
SMAD3-212ENST00000559937 FOXD4L4Q8WXT5 416 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-212ENST00000559937 TRIM44Q96DX7 344 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-212ENST00000559937 EDC3Q96F86 508 aaKnown RBP9.62□□□□□ -0.87
SMAD3-212ENST00000559937 NGLY1Q96IV0 654 aa9.62□□□□□ -0.87
SMAD3-212ENST00000559937 AK7Q96M32 723 aa9.62□□□□□ -0.87
SMAD3-212ENST00000559937 NEUROD6Q96NK8 337 aa9.62□□□□□ -0.87
SMAD3-212ENST00000559937 C8orf37Q96NL8 207 aa9.62□□□□□ -0.87
SMAD3-212ENST00000559937 NEK1Q96PY6 1258 aa9.62□□□□□ -0.87
SMAD3-212ENST00000559937 ASAP1Q9ULH1 1129 aa9.62□□□□□ -0.87
SMAD3-212ENST00000559937 TPCN1Q9ULQ1 816 aa9.62□□□□□ -0.87
SMAD3-212ENST00000559937 MTMR6Q9Y217 621 aa9.62□□□□□ -0.87
SMAD3-212ENST00000559937 THRAP3Q9Y2W1 955 aaKnown RBP9.62□□□□□ -0.87
SMAD3-212ENST00000559937 RIC1Q4ADV7 1423 aa9.62□□□□□ -0.87
SMAD3-212ENST00000559937 CASZ1Q86V15 1759 aa9.62□□□□□ -0.87
SMAD3-212ENST00000559937 A0A1B0GUL6 1792 aa9.61□□□□□ -0.87
SMAD3-212ENST00000559937 EXOC5O00471 708 aa9.61□□□□□ -0.87
SMAD3-212ENST00000559937 RNF113AO15541 343 aaKnown RBP9.61□□□□□ -0.87
SMAD3-212ENST00000559937 CYP19A1P11511 503 aaPredicted RBP9.61□□□□□ -0.87
SMAD3-212ENST00000559937 CLCN1P35523 988 aa9.61□□□□□ -0.87
SMAD3-212ENST00000559937 IL6STP40189 918 aaPredicted RBP9.61□□□□□ -0.87
SMAD3-212ENST00000559937 LRRC24Q50LG9 513 aa9.61□□□□□ -0.87
SMAD3-212ENST00000559937 CCDC158Q5M9N0 1113 aa9.61□□□□□ -0.87
SMAD3-212ENST00000559937 CCDC183Q5T5S1 534 aa9.61□□□□□ -0.87
SMAD3-212ENST00000559937 DDX46Q7L014 1031 aaKnown RBP9.61□□□□□ -0.87
SMAD3-212ENST00000559937 FAM184AQ8NB25 1140 aa9.61□□□□□ -0.87
SMAD3-212ENST00000559937 ZNF512BQ96KM6 892 aaPredicted RBP9.61□□□□□ -0.87
SMAD3-212ENST00000559937 LLPHQ9BRT6 129 aaKnown RBP9.61□□□□□ -0.87
SMAD3-212ENST00000559937 RTN4Q9NQC3 1192 aaKnown RBP9.61□□□□□ -0.87
SMAD3-212ENST00000559937 RBM27Q9P2N5 1060 aaKnown RBP9.61□□□□□ -0.87
SMAD3-212ENST00000559937 MYO5AQ9Y4I1 1855 aaKnown RBP9.61□□□□□ -0.87
SMAD3-212ENST00000559937 ELP1O95163 1332 aa9.6□□□□□ -0.87
SMAD3-212ENST00000559937 ATRNO75882 1429 aa9.6□□□□□ -0.87
SMAD3-212ENST00000559937 GOLIM4O00461 696 aa9.6□□□□□ -0.87
SMAD3-212ENST00000559937 CYP21A2P08686 494 aa9.6□□□□□ -0.87
SMAD3-212ENST00000559937 PRIM1P49642 420 aaKnown RBP9.6□□□□□ -0.87
SMAD3-212ENST00000559937 IFIT5Q13325 482 aaKnown RBP9.6□□□□□ -0.87
SMAD3-212ENST00000559937 UVSSAQ2YD98 709 aa9.6□□□□□ -0.87
SMAD3-212ENST00000559937 LARP1BQ659C4 914 aaKnown RBP9.6□□□□□ -0.87
SMAD3-212ENST00000559937 NLRP10Q86W26 655 aa9.6□□□□□ -0.87
SMAD3-212ENST00000559937 FNBP4Q8N3X1 1017 aaPredicted RBP9.6□□□□□ -0.87
SMAD3-212ENST00000559937 FBXL16Q8N461 479 aa9.6□□□□□ -0.87
SMAD3-212ENST00000559937 GTF3C6Q969F1 213 aa9.6□□□□□ -0.87
SMAD3-212ENST00000559937 PDLIM2Q96JY6 352 aa9.6□□□□□ -0.87
SMAD3-212ENST00000559937 AGXT2Q9BYV1 514 aa9.6□□□□□ -0.87
SMAD3-212ENST00000559937 RBSNQ9H1K0 784 aa9.6□□□□□ -0.87
SMAD3-212ENST00000559937 TSPY26PQ9H489 355 aa9.6□□□□□ -0.87
SMAD3-212ENST00000559937 QTRT2Q9H974 415 aaKnown RBP9.6□□□□□ -0.87
SMAD3-212ENST00000559937 RRAGDQ9NQL2 400 aaPredicted RBP9.6□□□□□ -0.87
SMAD3-212ENST00000559937 NSFL1CQ9UNZ2 370 aaKnown RBP9.6□□□□□ -0.87
SMAD3-212ENST00000559937 CNPY2Q9Y2B0 182 aa9.6□□□□□ -0.87
SMAD3-212ENST00000559937 KIF3AQ9Y496 699 aa9.6□□□□□ -0.87
SMAD3-212ENST00000559937 MAST3O60307 1309 aa9.59□□□□□ -0.87
SMAD3-212ENST00000559937 SYCE3A1L190 88 aa9.59□□□□□ -0.87
SMAD3-212ENST00000559937 ESPNB1AK53 854 aa9.59□□□□□ -0.87
SMAD3-212ENST00000559937 TIMM10P62072 90 aa9.59□□□□□ -0.87
SMAD3-212ENST00000559937 RBM6P78332 1123 aaKnown RBP9.59□□□□□ -0.87
SMAD3-212ENST00000559937 KRT85P78386 507 aa9.59□□□□□ -0.87
SMAD3-212ENST00000559937 TAF7LQ5H9L4 462 aa9.59□□□□□ -0.87
SMAD3-212ENST00000559937 TTC39AQ5SRH9 613 aa9.59□□□□□ -0.87
SMAD3-212ENST00000559937 DHX32Q7L7V1 743 aaKnown RBP9.59□□□□□ -0.87
SMAD3-212ENST00000559937 ZNF594Q96JF6 807 aaPredicted RBP9.59□□□□□ -0.87
SMAD3-212ENST00000559937 PUS3Q9BZE2 481 aaKnown RBP9.59□□□□□ -0.87
SMAD3-212ENST00000559937 CTNNA3Q9UI47 895 aa9.59□□□□□ -0.87
SMAD3-212ENST00000559937 SRCAPQ6ZRS2 3230 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms