RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 MED14O60244 1454 aa12.54□□□□□ -0.4
CARMIL3-202ENST00000559694 MYO1BO43795 1136 aa12.53□□□□□ -0.4
CARMIL3-202ENST00000559694 C8orf34Q49A92 452 aa12.53□□□□□ -0.4
CARMIL3-202ENST00000559694 DPP8Q6V1X1 898 aaPredicted RBP12.53□□□□□ -0.4
CARMIL3-202ENST00000559694 PDCL3Q9H2J4 239 aa12.53□□□□□ -0.4
CARMIL3-202ENST00000559694 CPS1P31327 1500 aa12.53□□□□□ -0.4
CARMIL3-202ENST00000559694 IQCA1Q86XH1 822 aa12.53□□□□□ -0.4
CARMIL3-202ENST00000559694 ZNF592Q92610 1267 aa12.53□□□□□ -0.4
CARMIL3-202ENST00000559694 GGA1Q9UJY5 639 aa12.53□□□□□ -0.4
CARMIL3-202ENST00000559694 HDAC9Q9UKV0 1011 aa12.53□□□□□ -0.4
CARMIL3-202ENST00000559694 CIZ1Q9ULV3 898 aaPredicted RBP12.53□□□□□ -0.4
CARMIL3-202ENST00000559694 NCOA3Q9Y6Q9 1424 aa12.53□□□□□ -0.4
CARMIL3-202ENST00000559694 ZFYP08048 801 aaPredicted RBP12.53□□□□□ -0.4
CARMIL3-202ENST00000559694 CCDC82Q8N4S0 544 aa12.53□□□□□ -0.4
CARMIL3-202ENST00000559694 PNPLA6Q8IY17 1366 aa12.53□□□□□ -0.4
CARMIL3-202ENST00000559694 HIBADHP31937 336 aaKnown RBP12.53□□□□□ -0.4
CARMIL3-202ENST00000559694 MPNDQ8N594 471 aa12.53□□□□□ -0.4
CARMIL3-202ENST00000559694 CRNKL1Q9BZJ0 848 aaKnown RBP12.53□□□□□ -0.4
CARMIL3-202ENST00000559694 MYOM1P52179 1685 aa12.53□□□□□ -0.4
CARMIL3-202ENST00000559694 SPATA31A1Q5TZJ5 1347 aa12.52□□□□□ -0.4
CARMIL3-202ENST00000559694 PCCAP05165 728 aaPredicted RBP12.52□□□□□ -0.4
CARMIL3-202ENST00000559694 GSTO1P78417 241 aa12.52□□□□□ -0.4
CARMIL3-202ENST00000559694 K7ELQ4 463 aaPredicted RBP12.52□□□□□ -0.41
CARMIL3-202ENST00000559694 CTSWP56202 376 aa12.52□□□□□ -0.41
CARMIL3-202ENST00000559694 BCS1LQ9Y276 419 aa12.52□□□□□ -0.41
CARMIL3-202ENST00000559694 ATF5Q9Y2D1 282 aaPredicted RBP12.52□□□□□ -0.41
CARMIL3-202ENST00000559694 PUM3Q15397 648 aaKnown RBP12.52□□□□□ -0.41
CARMIL3-202ENST00000559694 MIGA1Q8NAN2 632 aa12.52□□□□□ -0.41
CARMIL3-202ENST00000559694 RNF41Q9H4P4 317 aaPredicted RBP12.52□□□□□ -0.41
CARMIL3-202ENST00000559694 SERPINB2P05120 415 aa12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 ALDH1B1P30837 517 aa12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 MARCH10Q8NA82 808 aaPredicted RBP12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 MST1RQ04912 1400 aa12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 ARHGAP23Q9P227 1491 aa12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 ARHGEF28Q8N1W1 1705 aaKnown RBP12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 PDE6BP35913 854 aa12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 TNNI3KQ59H18 835 aa12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 LARGE2Q8N3Y3 721 aa12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 OTUD7AQ8TE49 926 aaPredicted RBP12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 CLEC11AQ9Y240 323 aa12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 FPGT-TNNI3KV9GXZ4 949 aa12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 USP32Q8NFA0 1604 aa12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 IFIT3O14879 490 aaKnown RBP12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 DDX11Q96FC9 970 aa12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 XAGE2Q96GT9 111 aa12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 LARP6Q9BRS8 491 aaKnown RBP12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 GJA3Q9Y6H8 435 aa12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 SLC4A4Q9Y6R1 1079 aa12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 SLIT1O75093 1534 aa12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 HLA-DOAP06340 250 aa12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 LDHBP07195 334 aaKnown RBP12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 PICALMQ13492 652 aa12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 PAXIP1Q6ZW49 1069 aaPredicted RBP12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 OVOS2A0A0J9YW53 1432 aa12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 OVOS2Q6IE36 1432 aa12.51□□□□□ -0.41
CARMIL3-202ENST00000559694 MBD3O95983 291 aa12.5□□□□□ -0.41
CARMIL3-202ENST00000559694 C2CD5Q86YS7 1000 aa12.5□□□□□ -0.41
CARMIL3-202ENST00000559694 PLEKHM2Q8IWE5 1019 aa12.5□□□□□ -0.41
CARMIL3-202ENST00000559694 VEZTQ9HBM0 779 aa12.5□□□□□ -0.41
CARMIL3-202ENST00000559694 KDRP35968 1356 aa12.5□□□□□ -0.41
CARMIL3-202ENST00000559694 RPS6KA4O75676 772 aa12.5□□□□□ -0.41
CARMIL3-202ENST00000559694 HMGN5P82970 282 aaKnown RBP12.5□□□□□ -0.41
CARMIL3-202ENST00000559694 SOGA3Q5TF21 947 aa12.5□□□□□ -0.41
CARMIL3-202ENST00000559694 LARP1BQ659C4 914 aaKnown RBP12.5□□□□□ -0.41
CARMIL3-202ENST00000559694 CCDC43Q96MW1 224 aaKnown RBP12.5□□□□□ -0.41
CARMIL3-202ENST00000559694 TTC41PQ6P2S7 1318 aa12.5□□□□□ -0.41
CARMIL3-202ENST00000559694 TSPY2A6NKD2 308 aa12.5□□□□□ -0.41
CARMIL3-202ENST00000559694 CEBPZQ03701 1054 aaKnown RBP12.5□□□□□ -0.41
CARMIL3-202ENST00000559694 EN1Q05925 392 aaPredicted RBP12.5□□□□□ -0.41
CARMIL3-202ENST00000559694 TXNRD1Q16881 649 aa12.5□□□□□ -0.41
CARMIL3-202ENST00000559694 MAGEB6Q8N7X4 407 aa12.5□□□□□ -0.41
CARMIL3-202ENST00000559694 ABCC4O15439 1325 aa12.5□□□□□ -0.41
CARMIL3-202ENST00000559694 MCMDC2Q4G0Z9 681 aa12.49□□□□□ -0.41
CARMIL3-202ENST00000559694 LPIN2Q92539 896 aa12.49□□□□□ -0.41
CARMIL3-202ENST00000559694 RRAGDQ9NQL2 400 aaPredicted RBP12.49□□□□□ -0.41
CARMIL3-202ENST00000559694 PDE4BQ07343 736 aa12.49□□□□□ -0.41
CARMIL3-202ENST00000559694 MFSD6Q6ZSS7 791 aa12.49□□□□□ -0.41
CARMIL3-202ENST00000559694 ZSCAN31Q96LW9 406 aaPredicted RBP12.49□□□□□ -0.41
CARMIL3-202ENST00000559694 FEZ1Q99689 392 aa12.49□□□□□ -0.41
CARMIL3-202ENST00000559694 DCCP43146 1447 aa12.49□□□□□ -0.41
CARMIL3-202ENST00000559694 TBC1D32Q96NH3 1257 aa12.48□□□□□ -0.41
CARMIL3-202ENST00000559694 GREM2Q9H772 168 aa12.48□□□□□ -0.41
CARMIL3-202ENST00000559694 NLRP10Q86W26 655 aa12.48□□□□□ -0.41
CARMIL3-202ENST00000559694 DENND2AQ9ULE3 1009 aa12.48□□□□□ -0.41
CARMIL3-202ENST00000559694 STX8Q9UNK0 236 aa12.48□□□□□ -0.41
CARMIL3-202ENST00000559694 NDUFB9Q9Y6M9 179 aa12.48□□□□□ -0.41
CARMIL3-202ENST00000559694 SPATA31A5Q5VU36 1347 aa12.48□□□□□ -0.41
CARMIL3-202ENST00000559694 SPATA31A7Q8IWB4 1347 aa12.48□□□□□ -0.41
CARMIL3-202ENST00000559694 OVOS2A0A0G2JMS6 1433 aa12.48□□□□□ -0.41
CARMIL3-202ENST00000559694 MMP10P09238 476 aa12.48□□□□□ -0.41
CARMIL3-202ENST00000559694 TNPO1Q92973 898 aaKnown RBP12.48□□□□□ -0.41
CARMIL3-202ENST00000559694 CABP5Q9NP86 173 aa12.48□□□□□ -0.41
CARMIL3-202ENST00000559694 CDKL5O76039 1030 aa12.48□□□□□ -0.41
CARMIL3-202ENST00000559694 NMIQ13287 307 aaPredicted RBP12.48□□□□□ -0.41
CARMIL3-202ENST00000559694 HLFQ16534 295 aa12.48□□□□□ -0.41
CARMIL3-202ENST00000559694 CTCFLQ8NI51 663 aaPredicted RBP12.48□□□□□ -0.41
CARMIL3-202ENST00000559694 SIGLEC1Q9BZZ2 1709 aa12.47□□□□□ -0.41
CARMIL3-202ENST00000559694 MAGEB6P1A0A0J9YX57 407 aa12.47□□□□□ -0.41
CARMIL3-202ENST00000559694 GOLGA6L19H0YKK7 550 aa12.47□□□□□ -0.41
CARMIL3-202ENST00000559694 TPM4P67936 248 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms