RNA–Protein interactions for RNA: ENST00000559663.1

CDK12-205, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-205ENST00000559663 ZNF609O15014 1411 aa10.61□□□□□ -0.71
CDK12-205ENST00000559663 ATP5J2-PTCD1G3V325 749 aa10.61□□□□□ -0.71
CDK12-205ENST00000559663 TRPA1O75762 1119 aa10.61□□□□□ -0.71
CDK12-205ENST00000559663 TRIM28Q13263 835 aaKnown RBP10.61□□□□□ -0.71
CDK12-205ENST00000559663 HDGFL1Q5TGJ6 251 aa10.61□□□□□ -0.71
CDK12-205ENST00000559663 ANKRD13DQ6ZTN6 518 aa10.61□□□□□ -0.71
CDK12-205ENST00000559663 SULF1Q8IWU6 871 aa10.61□□□□□ -0.71
CDK12-205ENST00000559663 CDCA5Q96FF9 252 aa10.61□□□□□ -0.71
CDK12-205ENST00000559663 CSRNP1Q96S65 589 aa10.61□□□□□ -0.71
CDK12-205ENST00000559663 PODXL2Q9NZ53 605 aa10.61□□□□□ -0.71
CDK12-205ENST00000559663 ASTN2O75129 1339 aaPredicted RBP10.6□□□□□ -0.71
CDK12-205ENST00000559663 COL4A1P02462 1669 aa10.6□□□□□ -0.71
CDK12-205ENST00000559663 IRS4O14654 1257 aaPredicted RBP10.6□□□□□ -0.71
CDK12-205ENST00000559663 SOX10P56693 466 aa10.6□□□□□ -0.71
CDK12-205ENST00000559663 ZNF280AP59817 542 aaPredicted RBP10.6□□□□□ -0.71
CDK12-205ENST00000559663 RPS8P62241 208 aaKnown RBP10.6□□□□□ -0.71
CDK12-205ENST00000559663 CTU1Q7Z7A3 348 aaKnown RBP10.6□□□□□ -0.71
CDK12-205ENST00000559663 RASAL3Q86YV0 1011 aa10.6□□□□□ -0.71
CDK12-205ENST00000559663 REM2Q8IYK8 340 aaPredicted RBP10.6□□□□□ -0.71
CDK12-205ENST00000559663 ZC3H12CQ9C0D7 883 aaKnown RBP10.6□□□□□ -0.71
CDK12-205ENST00000559663 DBF4Q9UBU7 674 aaPredicted RBP10.6□□□□□ -0.71
CDK12-205ENST00000559663 UFL1O94874 794 aa10.59□□□□□ -0.71
CDK12-205ENST00000559663 FKBP1BP68106 108 aa10.59□□□□□ -0.71
CDK12-205ENST00000559663 RTL5Q5HYW3 569 aaPredicted RBP10.59□□□□□ -0.71
CDK12-205ENST00000559663 RSBN1LQ6PCB5 846 aaPredicted RBP10.59□□□□□ -0.71
CDK12-205ENST00000559663 HYPKQ9NX55 129 aa10.59□□□□□ -0.71
CDK12-205ENST00000559663 CASP8AP2Q9UKL3 1982 aa10.59□□□□□ -0.71
CDK12-205ENST00000559663 DDX60Q8IY21 1712 aaKnown RBP10.58□□□□□ -0.72
CDK12-205ENST00000559663 SCARF1Q14162 830 aa10.58□□□□□ -0.72
CDK12-205ENST00000559663 ANGEL2Q5VTE6 544 aaKnown RBP10.58□□□□□ -0.72
CDK12-205ENST00000559663 ZBTB38Q8NAP3 1195 aaPredicted RBP10.58□□□□□ -0.72
CDK12-205ENST00000559663 AGBL3Q8NEM8 1001 aa10.58□□□□□ -0.72
CDK12-205ENST00000559663 SEC31BQ9NQW1 1179 aa10.58□□□□□ -0.72
CDK12-205ENST00000559663 GGA1Q9UJY5 639 aa10.58□□□□□ -0.72
CDK12-205ENST00000559663 TRIM35Q9UPQ4 493 aa10.58□□□□□ -0.72
CDK12-205ENST00000559663 LAS1LQ9Y4W2 734 aaKnown RBP10.58□□□□□ -0.72
CDK12-205ENST00000559663 PITPNM2Q9BZ72 1349 aa10.58□□□□□ -0.72
CDK12-205ENST00000559663 HSP90B1P14625 803 aaKnown RBP10.57□□□□□ -0.72
CDK12-205ENST00000559663 RALBP1Q15311 655 aa10.57□□□□□ -0.72
CDK12-205ENST00000559663 NEUROD2Q15784 382 aa10.57□□□□□ -0.72
CDK12-205ENST00000559663 PRPF38BQ5VTL8 546 aaKnown RBP10.57□□□□□ -0.72
CDK12-205ENST00000559663 CCDC146Q8IYE0 955 aa10.57□□□□□ -0.72
CDK12-205ENST00000559663 GMLQ99445 158 aa10.57□□□□□ -0.72
CDK12-205ENST00000559663 ANKIB1Q9P2G1 1089 aa10.57□□□□□ -0.72
CDK12-205ENST00000559663 G3V3G9 751 aa10.56□□□□□ -0.72
CDK12-205ENST00000559663 USP17L8P0C7I0 530 aa10.56□□□□□ -0.72
CDK12-205ENST00000559663 CCDC152Q4G0S7 254 aa10.56□□□□□ -0.72
CDK12-205ENST00000559663 DCAF8Q5TAQ9 597 aa10.56□□□□□ -0.72
CDK12-205ENST00000559663 DUSP27Q5VZP5 1158 aa10.56□□□□□ -0.72
CDK12-205ENST00000559663 MYOZ2Q9NPC6 264 aa10.56□□□□□ -0.72
CDK12-205ENST00000559663 HPS5Q9UPZ3 1129 aa10.56□□□□□ -0.72
CDK12-205ENST00000559663 TAF1P21675 1872 aa10.55□□□□□ -0.72
CDK12-205ENST00000559663 PCCAP05165 728 aaPredicted RBP10.55□□□□□ -0.72
CDK12-205ENST00000559663 GOLGA2Q08379 1002 aa10.55□□□□□ -0.72
CDK12-205ENST00000559663 PKN2Q16513 984 aaKnown RBP10.55□□□□□ -0.72
CDK12-205ENST00000559663 MOB2Q70IA6 237 aa10.55□□□□□ -0.72
CDK12-205ENST00000559663 RIC3Q7Z5B4 369 aa10.55□□□□□ -0.72
CDK12-205ENST00000559663 RUNDC1Q96C34 613 aa10.55□□□□□ -0.72
CDK12-205ENST00000559663 HTTP42858 3142 aa10.55□□□□□ -0.72
CDK12-205ENST00000559663 XDHP47989 1333 aa10.55□□□□□ -0.72
CDK12-205ENST00000559663 PDE4DIPQ5VU43 2346 aa10.55□□□□□ -0.72
CDK12-205ENST00000559663 PAPPA2Q9BXP8 1791 aa10.54□□□□□ -0.72
CDK12-205ENST00000559663 MKI67P46013 3256 aaKnown RBP10.54□□□□□ -0.72
CDK12-205ENST00000559663 USP17L3A6NCW0 530 aa10.54□□□□□ -0.72
CDK12-205ENST00000559663 USP17L4A6NCW7 530 aa10.54□□□□□ -0.72
CDK12-205ENST00000559663 PDE8AO60658 829 aa10.54□□□□□ -0.72
CDK12-205ENST00000559663 ATP2B4P23634 1241 aa10.54□□□□□ -0.72
CDK12-205ENST00000559663 USP17L1Q7RTZ2 530 aa10.54□□□□□ -0.72
CDK12-205ENST00000559663 PODNQ7Z5L7 613 aa10.54□□□□□ -0.72
CDK12-205ENST00000559663 CCDC191Q8NCU4 936 aa10.54□□□□□ -0.72
CDK12-205ENST00000559663 ZNF296Q8WUU4 475 aaPredicted RBP10.54□□□□□ -0.72
CDK12-205ENST00000559663 MYD88Q99836 296 aa10.54□□□□□ -0.72
CDK12-205ENST00000559663 MBIPQ9NS73 344 aa10.54□□□□□ -0.72
CDK12-205ENST00000559663 UBE2Q2LH0YL09 131 aa10.53□□□□□ -0.72
CDK12-205ENST00000559663 ZNF853P0CG23 659 aa10.53□□□□□ -0.72
CDK12-205ENST00000559663 TM4SF4P48230 202 aa10.53□□□□□ -0.72
CDK12-205ENST00000559663 NOM1Q5C9Z4 860 aaKnown RBP10.53□□□□□ -0.72
CDK12-205ENST00000559663 ANKRD18AQ8IVF6 992 aa10.53□□□□□ -0.72
CDK12-205ENST00000559663 CCDC85AQ96PX6 553 aaPredicted RBP10.53□□□□□ -0.72
CDK12-205ENST00000559663 PHAXQ9H814 394 aaKnown RBP10.53□□□□□ -0.72
CDK12-205ENST00000559663 CWC25Q9NXE8 425 aaPredicted RBP10.53□□□□□ -0.72
CDK12-205ENST00000559663 HDAC9Q9UKV0 1011 aa10.53□□□□□ -0.72
CDK12-205ENST00000559663 SCAF8Q9UPN6 1271 aaKnown RBP10.53□□□□□ -0.72
CDK12-205ENST00000559663 SCN9AQ15858 1988 aa10.53□□□□□ -0.72
CDK12-205ENST00000559663 MYBBP1AQ9BQG0 1328 aaKnown RBP10.53□□□□□ -0.72
CDK12-205ENST00000559663 MED23Q9ULK4 1368 aa10.52□□□□□ -0.72
CDK12-205ENST00000559663 BRCA2P51587 3418 aa10.52□□□□□ -0.73
CDK12-205ENST00000559663 TBC1D8O95759 1140 aa10.52□□□□□ -0.73
CDK12-205ENST00000559663 WDR43Q15061 677 aaKnown RBP eCLIP10.52□□□□□ -0.73
CDK12-205ENST00000559663 NBPF9Q3BBW0 867 aa10.52□□□□□ -0.73
CDK12-205ENST00000559663 DACT2Q5SW24 774 aa10.52□□□□□ -0.73
CDK12-205ENST00000559663 PRAMEF18Q5VWM3 479 aa10.52□□□□□ -0.73
CDK12-205ENST00000559663 CFHR5Q9BXR6 569 aa10.52□□□□□ -0.73
CDK12-205ENST00000559663 GPR25O00155 361 aa10.51□□□□□ -0.73
CDK12-205ENST00000559663 FBXO46Q6PJ61 603 aaPredicted RBP10.51□□□□□ -0.73
CDK12-205ENST00000559663 OGFOD1Q8N543 542 aa10.51□□□□□ -0.73
CDK12-205ENST00000559663 JARID2Q92833 1246 aaPredicted RBP10.51□□□□□ -0.73
CDK12-205ENST00000559663 CDC5LQ99459 802 aaKnown RBP10.51□□□□□ -0.73
CDK12-205ENST00000559663 METTL22Q9BUU2 404 aaPredicted RBP10.51□□□□□ -0.73
CDK12-205ENST00000559663 IFT57Q9NWB7 429 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms