RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 MRPL50Q8N5N7 158 aaKnown RBP15.98■□□□□ 0.15
LRRC28-214ENST00000559433 TBC1D16Q8TBP0 767 aa15.98■□□□□ 0.15
LRRC28-214ENST00000559433 EYA3Q99504 573 aa15.98■□□□□ 0.15
LRRC28-214ENST00000559433 PLA2G12BQ9BX93 195 aa15.98■□□□□ 0.15
LRRC28-214ENST00000559433 UFL1O94874 794 aa15.97■□□□□ 0.15
LRRC28-214ENST00000559433 CXCL9Q07325 125 aa15.97■□□□□ 0.15
LRRC28-214ENST00000559433 GPR101Q96P66 508 aaPredicted RBP15.97■□□□□ 0.15
LRRC28-214ENST00000559433 PODXL2Q9NZ53 605 aa15.97■□□□□ 0.15
LRRC28-214ENST00000559433 GGA1Q9UJY5 639 aa15.97■□□□□ 0.15
LRRC28-214ENST00000559433 RAD17O75943 681 aa15.96■□□□□ 0.15
LRRC28-214ENST00000559433 SCNN1DP51172 638 aa15.96■□□□□ 0.15
LRRC28-214ENST00000559433 HTRA3P83110 453 aa15.96■□□□□ 0.15
LRRC28-214ENST00000559433 FAM161AQ3B820 660 aa15.96■□□□□ 0.15
LRRC28-214ENST00000559433 CIAPIN1Q6FI81 312 aa15.96■□□□□ 0.15
LRRC28-214ENST00000559433 TRMT2AQ8IZ69 625 aaKnown RBP15.96■□□□□ 0.15
LRRC28-214ENST00000559433 SSH1Q8WYL5 1049 aa15.96■□□□□ 0.15
LRRC28-214ENST00000559433 BCL2L13Q9BXK5 485 aa15.96■□□□□ 0.15
LRRC28-214ENST00000559433 ZC3H12CQ9C0D7 883 aaKnown RBP15.96■□□□□ 0.15
LRRC28-214ENST00000559433 SRCIN1Q9C0H9 1055 aa15.96■□□□□ 0.15
LRRC28-214ENST00000559433 DBNDD1Q9H9R9 158 aa15.96■□□□□ 0.15
LRRC28-214ENST00000559433 PTPRCP08575 1304 aa15.95■□□□□ 0.14
LRRC28-214ENST00000559433 XDHP47989 1333 aa15.95■□□□□ 0.14
LRRC28-214ENST00000559433 YDJCA8MPS7 323 aa15.95■□□□□ 0.14
LRRC28-214ENST00000559433 GRM8O00222 908 aa15.95■□□□□ 0.14
LRRC28-214ENST00000559433 ALDH1L1O75891 902 aa15.95■□□□□ 0.14
LRRC28-214ENST00000559433 ITGA6P23229 1130 aa15.95■□□□□ 0.14
LRRC28-214ENST00000559433 IGHMBP2P38935 993 aaKnown RBP15.95■□□□□ 0.14
LRRC28-214ENST00000559433 DNAJC5GQ8N7S2 189 aa15.95■□□□□ 0.14
LRRC28-214ENST00000559433 BSDC1Q9NW68 430 aaPredicted RBP15.95■□□□□ 0.14
LRRC28-214ENST00000559433 C9orf78Q9NZ63 289 aaPredicted RBP15.95■□□□□ 0.14
LRRC28-214ENST00000559433 A0A1B0GUL6 1792 aa15.95■□□□□ 0.14
LRRC28-214ENST00000559433 SCN9AQ15858 1988 aa15.95■□□□□ 0.14
LRRC28-214ENST00000559433 PSME4Q14997 1843 aa15.94■□□□□ 0.14
LRRC28-214ENST00000559433 ECE2O60344 883 aa15.94■□□□□ 0.14
LRRC28-214ENST00000559433 CSF1RP07333 972 aa15.94■□□□□ 0.14
LRRC28-214ENST00000559433 EPS15P42566 896 aa15.94■□□□□ 0.14
LRRC28-214ENST00000559433 GMPSP49915 693 aaPredicted RBP15.94■□□□□ 0.14
LRRC28-214ENST00000559433 DOK7Q18PE1 504 aa15.94■□□□□ 0.14
LRRC28-214ENST00000559433 SMC4Q9NTJ3 1288 aa15.94■□□□□ 0.14
LRRC28-214ENST00000559433 ATP2B4P23634 1241 aa15.93■□□□□ 0.14
LRRC28-214ENST00000559433 FOXO4P98177 505 aa15.93■□□□□ 0.14
LRRC28-214ENST00000559433 ALDH1L2Q3SY69 923 aa15.93■□□□□ 0.14
LRRC28-214ENST00000559433 KLRG1Q96E93 195 aa15.93■□□□□ 0.14
LRRC28-214ENST00000559433 GPRC5DQ9NZD1 345 aa15.93■□□□□ 0.14
LRRC28-214ENST00000559433 CHMP3Q9Y3E7 222 aa15.93■□□□□ 0.14
LRRC28-214ENST00000559433 ANKRD18BA2A2Z9 1011 aa15.92■□□□□ 0.14
LRRC28-214ENST00000559433 CT47B1P0C2W7 299 aaPredicted RBP15.92■□□□□ 0.14
LRRC28-214ENST00000559433 USP50Q70EL3 339 aaPredicted RBP15.92■□□□□ 0.14
LRRC28-214ENST00000559433 CNTROBQ8N137 903 aa15.92■□□□□ 0.14
LRRC28-214ENST00000559433 MPHOSPH8Q99549 860 aa15.92■□□□□ 0.14
LRRC28-214ENST00000559433 MINPP1Q9UNW1 487 aa15.92■□□□□ 0.14
LRRC28-214ENST00000559433 H7C1D1 291 aa15.91■□□□□ 0.14
LRRC28-214ENST00000559433 PSMD14O00487 310 aa15.91■□□□□ 0.14
LRRC28-214ENST00000559433 IFIT5Q13325 482 aaKnown RBP15.91■□□□□ 0.14
LRRC28-214ENST00000559433 ADARB2Q9NS39 739 aaKnown RBP15.91■□□□□ 0.14
LRRC28-214ENST00000559433 EPHA10Q5JZY3 1008 aa15.9■□□□□ 0.14
LRRC28-214ENST00000559433 MAP1SQ66K74 1059 aaPredicted RBP15.9■□□□□ 0.14
LRRC28-214ENST00000559433 LMBR1LQ6UX01 489 aa15.9■□□□□ 0.14
LRRC28-214ENST00000559433 CREBZFQ9NS37 354 aa15.9■□□□□ 0.14
LRRC28-214ENST00000559433 MED23Q9ULK4 1368 aa15.89■□□□□ 0.13
LRRC28-214ENST00000559433 NBPF7P0C2Y1 421 aaPredicted RBP15.89■□□□□ 0.13
LRRC28-214ENST00000559433 CCT4P50991 539 aaKnown RBP15.89■□□□□ 0.13
LRRC28-214ENST00000559433 HNRNPUQ00839 825 aaKnown RBP eCLIP15.89■□□□□ 0.13
LRRC28-214ENST00000559433 ANKRD2Q9GZV1 360 aa15.89■□□□□ 0.13
LRRC28-214ENST00000559433 KCNQ5Q9NR82 932 aa15.89■□□□□ 0.13
LRRC28-214ENST00000559433 PASKQ96RG2 1323 aa15.89■□□□□ 0.13
LRRC28-214ENST00000559433 WTIPA6NIX2 430 aaPredicted RBP15.88■□□□□ 0.13
LRRC28-214ENST00000559433 TMEM88BA6NKF7 163 aa15.88■□□□□ 0.13
LRRC28-214ENST00000559433 CCDC57Q2TAC2 916 aa15.88■□□□□ 0.13
LRRC28-214ENST00000559433 TAF7LQ5H9L4 462 aa15.88■□□□□ 0.13
LRRC28-214ENST00000559433 MICALL2Q8IY33 904 aa15.88■□□□□ 0.13
LRRC28-214ENST00000559433 SUCLG2Q96I99 432 aa15.88■□□□□ 0.13
LRRC28-214ENST00000559433 CNOT7Q9UIV1 285 aaKnown RBP15.88■□□□□ 0.13
LRRC28-214ENST00000559433 ZBTB12Q9Y330 459 aaPredicted RBP15.88■□□□□ 0.13
LRRC28-214ENST00000559433 TRPM7Q96QT4 1865 aa15.88■□□□□ 0.13
LRRC28-214ENST00000559433 UTYO14607 1347 aa15.88■□□□□ 0.13
LRRC28-214ENST00000559433 SHTN1A0MZ66 631 aa15.87■□□□□ 0.13
LRRC28-214ENST00000559433 ITGBL1O95965 494 aaPredicted RBP15.87■□□□□ 0.13
LRRC28-214ENST00000559433 KCNJ4P48050 445 aa15.87■□□□□ 0.13
LRRC28-214ENST00000559433 CHRNDQ07001 517 aa15.87■□□□□ 0.13
LRRC28-214ENST00000559433 LEMD3Q9Y2U8 911 aa15.87■□□□□ 0.13
LRRC28-214ENST00000559433 ZNF804BA4D1E1 1349 aa15.87■□□□□ 0.13
LRRC28-214ENST00000559433 ZNF646O15015 1829 aaPredicted RBP15.87■□□□□ 0.13
LRRC28-214ENST00000559433 RPS12P25398 132 aaKnown RBP15.86■□□□□ 0.13
LRRC28-214ENST00000559433 DPF2Q92785 391 aa15.86■□□□□ 0.13
LRRC28-214ENST00000559433 KAZALD1Q96I82 304 aa15.86■□□□□ 0.13
LRRC28-214ENST00000559433 ZNF594Q96JF6 807 aaPredicted RBP15.86■□□□□ 0.13
LRRC28-214ENST00000559433 NOB1Q9ULX3 412 aaKnown RBP15.86■□□□□ 0.13
LRRC28-214ENST00000559433 VIL1P09327 827 aaKnown RBP15.85■□□□□ 0.13
LRRC28-214ENST00000559433 RARSP54136 660 aaKnown RBP15.85■□□□□ 0.13
LRRC28-214ENST00000559433 TRPM4Q8TD43 1214 aa15.85■□□□□ 0.13
LRRC28-214ENST00000559433 BICC1Q9H694 974 aaKnown RBP15.85■□□□□ 0.13
LRRC28-214ENST00000559433 MKRN1Q9UHC7 482 aaKnown RBP15.85■□□□□ 0.13
LRRC28-214ENST00000559433 TAF5LO75529 589 aa15.84■□□□□ 0.13
LRRC28-214ENST00000559433 BRPF1P55201 1214 aaPredicted RBP15.84■□□□□ 0.13
LRRC28-214ENST00000559433 RBM26Q5T8P6 1007 aaKnown RBP15.84■□□□□ 0.13
LRRC28-214ENST00000559433 LDHAL6AQ6ZMR3 332 aa15.84■□□□□ 0.13
LRRC28-214ENST00000559433 PODNQ7Z5L7 613 aa15.84■□□□□ 0.13
LRRC28-214ENST00000559433 JMYQ8N9B5 988 aa15.84■□□□□ 0.13
LRRC28-214ENST00000559433 HELBQ8NG08 1087 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms