RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 PUS3Q9BZE2 481 aaKnown RBP18.44■□□□□ 0.54
SNRPA1-207ENST00000559309 DCTPP1Q9H773 170 aa18.44■□□□□ 0.54
SNRPA1-207ENST00000559309 PA2G4Q9UQ80 394 aaKnown RBP18.44■□□□□ 0.54
SNRPA1-207ENST00000559309 EYA2O00167 538 aa18.43■□□□□ 0.54
SNRPA1-207ENST00000559309 GRIN3BO60391 1043 aa18.43■□□□□ 0.54
SNRPA1-207ENST00000559309 ZNF622Q969S3 477 aaKnown RBP eCLIP18.43■□□□□ 0.541e-7■□□□□ 10.2
SNRPA1-207ENST00000559309 PODXL2Q9NZ53 605 aa18.43■□□□□ 0.54
SNRPA1-207ENST00000559309 MINPP1Q9UNW1 487 aa18.43■□□□□ 0.54
SNRPA1-207ENST00000559309 PPEF1O14829 653 aaPredicted RBP18.42■□□□□ 0.54
SNRPA1-207ENST00000559309 HMMRO75330 724 aa18.42■□□□□ 0.54
SNRPA1-207ENST00000559309 YBX3P16989 372 aaKnown RBP eCLIP18.42■□□□□ 0.54
SNRPA1-207ENST00000559309 LRRC24Q50LG9 513 aa18.42■□□□□ 0.54
SNRPA1-207ENST00000559309 CHMP3Q9Y3E7 222 aa18.42■□□□□ 0.54
SNRPA1-207ENST00000559309 SASH1O94885 1247 aa18.41■□□□□ 0.54
SNRPA1-207ENST00000559309 NEFLP07196 543 aa18.41■□□□□ 0.54
SNRPA1-207ENST00000559309 IGHMBP2P38935 993 aaKnown RBP18.41■□□□□ 0.54
SNRPA1-207ENST00000559309 DALRD3Q5D0E6 543 aaKnown RBP18.41■□□□□ 0.54
SNRPA1-207ENST00000559309 CC2D2BQ6DHV5 1058 aa18.41■□□□□ 0.54
SNRPA1-207ENST00000559309 LDHAL6AQ6ZMR3 332 aa18.41■□□□□ 0.54
SNRPA1-207ENST00000559309 SMC5Q8IY18 1101 aa18.41■□□□□ 0.54
SNRPA1-207ENST00000559309 IRS2Q9Y4H2 1338 aa18.41■□□□□ 0.54
SNRPA1-207ENST00000559309 ARAP2Q8WZ64 1704 aa18.4■□□□□ 0.54
SNRPA1-207ENST00000559309 IGHDP01880 384 aa18.4■□□□□ 0.54
SNRPA1-207ENST00000559309 IL15P40933 162 aaPredicted RBP18.4■□□□□ 0.54
SNRPA1-207ENST00000559309 PELP1Q8IZL8 1130 aaKnown RBP18.4■□□□□ 0.54
SNRPA1-207ENST00000559309 RTFDC1Q9BY42 306 aaPredicted RBP18.4■□□□□ 0.54
SNRPA1-207ENST00000559309 GRIPAP1Q4V328 841 aa18.39■□□□□ 0.53
SNRPA1-207ENST00000559309 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.39■□□□□ 0.53
SNRPA1-207ENST00000559309 MROH5Q6ZUA9 1318 aa18.39■□□□□ 0.53
SNRPA1-207ENST00000559309 KDM2BQ8NHM5 1336 aa18.39■□□□□ 0.53
SNRPA1-207ENST00000559309 FGFR2P21802 821 aa18.38■□□□□ 0.53
SNRPA1-207ENST00000559309 CHRNDQ07001 517 aa18.38■□□□□ 0.53
SNRPA1-207ENST00000559309 OLFM4Q6UX06 510 aa18.38■□□□□ 0.53
SNRPA1-207ENST00000559309 MPHOSPH8Q99549 860 aa18.38■□□□□ 0.53
SNRPA1-207ENST00000559309 SURF6O75683 361 aaKnown RBP18.37■□□□□ 0.53
SNRPA1-207ENST00000559309 PDE8BO95263 885 aa18.37■□□□□ 0.53
SNRPA1-207ENST00000559309 GPR108Q9NPR9 543 aa18.37■□□□□ 0.53
SNRPA1-207ENST00000559309 LTBP3Q9NS15 1303 aa18.37■□□□□ 0.53
SNRPA1-207ENST00000559309 ZBTB22O15209 634 aa18.36■□□□□ 0.53
SNRPA1-207ENST00000559309 C21orf2O43822 256 aa18.36■□□□□ 0.53
SNRPA1-207ENST00000559309 RAB11FIP3O75154 756 aa18.36■□□□□ 0.53
SNRPA1-207ENST00000559309 XDHP47989 1333 aa18.36■□□□□ 0.53
SNRPA1-207ENST00000559309 GPSM2P81274 684 aa18.36■□□□□ 0.53
SNRPA1-207ENST00000559309 HSP90AB4PQ58FF6 505 aa18.36■□□□□ 0.53
SNRPA1-207ENST00000559309 TAF7LQ5H9L4 462 aa18.36■□□□□ 0.53
SNRPA1-207ENST00000559309 SOGA3Q5TF21 947 aa18.36■□□□□ 0.53
SNRPA1-207ENST00000559309 C15orf52Q6ZUT6 534 aaKnown RBP18.36■□□□□ 0.53
SNRPA1-207ENST00000559309 GCC1Q96CN9 775 aa18.36■□□□□ 0.53
SNRPA1-207ENST00000559309 PSMD1Q99460 953 aa18.36■□□□□ 0.53
SNRPA1-207ENST00000559309 ANKRD2Q9GZV1 360 aa18.36■□□□□ 0.53
SNRPA1-207ENST00000559309 SIL1Q9H173 461 aa18.36■□□□□ 0.53
SNRPA1-207ENST00000559309 RWDD1Q9H446 243 aaPredicted RBP18.36■□□□□ 0.53
SNRPA1-207ENST00000559309 EXOC6BQ9Y2D4 811 aa18.36■□□□□ 0.53
SNRPA1-207ENST00000559309 CCDC93Q567U6 631 aa18.35■□□□□ 0.53
SNRPA1-207ENST00000559309 CNNM1Q9NRU3 951 aa18.35■□□□□ 0.53
SNRPA1-207ENST00000559309 ZNF609O15014 1411 aa18.34■□□□□ 0.53
SNRPA1-207ENST00000559309 WTIPA6NIX2 430 aaPredicted RBP18.34■□□□□ 0.53
SNRPA1-207ENST00000559309 NFKBIEO00221 500 aa18.34■□□□□ 0.53
SNRPA1-207ENST00000559309 G3BP1Q13283 466 aaKnown RBP eCLIP18.34■□□□□ 0.53
SNRPA1-207ENST00000559309 ERC1Q8IUD2 1116 aa18.34■□□□□ 0.53
SNRPA1-207ENST00000559309 RTKN2Q8IZC4 609 aa18.34■□□□□ 0.53
SNRPA1-207ENST00000559309 RHPN1Q8TCX5 695 aa18.34■□□□□ 0.53
SNRPA1-207ENST00000559309 POLLQ9UGP5 575 aa18.34■□□□□ 0.53
SNRPA1-207ENST00000559309 BCS1LQ9Y276 419 aa18.34■□□□□ 0.53
SNRPA1-207ENST00000559309 LEMD3Q9Y2U8 911 aa18.34■□□□□ 0.53
SNRPA1-207ENST00000559309 SBF1O95248 1867 aa18.34■□□□□ 0.53
SNRPA1-207ENST00000559309 TFCP2Q12800 502 aa18.33■□□□□ 0.52
SNRPA1-207ENST00000559309 UBE4AQ14139 1066 aa18.33■□□□□ 0.52
SNRPA1-207ENST00000559309 TBC1D16Q8TBP0 767 aa18.33■□□□□ 0.52
SNRPA1-207ENST00000559309 PPP4R2Q9NY27 417 aa18.33■□□□□ 0.52
SNRPA1-207ENST00000559309 TAF5LO75529 589 aa18.32■□□□□ 0.52
SNRPA1-207ENST00000559309 MPNDQ8N594 471 aa18.32■□□□□ 0.52
SNRPA1-207ENST00000559309 KIF1BPQ96EK5 621 aa18.32■□□□□ 0.52
SNRPA1-207ENST00000559309 VPS33BQ9H267 617 aa18.32■□□□□ 0.52
SNRPA1-207ENST00000559309 ZNF646O15015 1829 aaPredicted RBP18.32■□□□□ 0.52
SNRPA1-207ENST00000559309 MED23Q9ULK4 1368 aa18.31■□□□□ 0.52
SNRPA1-207ENST00000559309 DICER1Q9UPY3 1922 aaKnown RBP18.31■□□□□ 0.52
SNRPA1-207ENST00000559309 ATP2B4P23634 1241 aa18.31■□□□□ 0.52
SNRPA1-207ENST00000559309 PRELPP51888 382 aa18.31■□□□□ 0.52
SNRPA1-207ENST00000559309 FKBP4Q02790 459 aaKnown RBP eCLIP18.31■□□□□ 0.52
SNRPA1-207ENST00000559309 METTL24Q5JXM2 366 aa18.31■□□□□ 0.52
SNRPA1-207ENST00000559309 HELBQ8NG08 1087 aaPredicted RBP18.31■□□□□ 0.52
SNRPA1-207ENST00000559309 CEP126Q9P2H0 1117 aa18.31■□□□□ 0.52
SNRPA1-207ENST00000559309 NSFL1CQ9UNZ2 370 aaKnown RBP18.31■□□□□ 0.52
SNRPA1-207ENST00000559309 COL4A5P29400 1685 aa18.31■□□□□ 0.52
SNRPA1-207ENST00000559309 ZNF804BA4D1E1 1349 aa18.3■□□□□ 0.52
SNRPA1-207ENST00000559309 SALL3Q9BXA9 1300 aa18.3■□□□□ 0.52
SNRPA1-207ENST00000559309 SNAP23O00161 211 aa18.3■□□□□ 0.52
SNRPA1-207ENST00000559309 PUM3Q15397 648 aaKnown RBP18.3■□□□□ 0.52
SNRPA1-207ENST00000559309 NUCB1Q02818 461 aa18.29■□□□□ 0.52
SNRPA1-207ENST00000559309 TNNI3KQ59H18 835 aa18.29■□□□□ 0.52
SNRPA1-207ENST00000559309 DPP8Q6V1X1 898 aaPredicted RBP18.29■□□□□ 0.52
SNRPA1-207ENST00000559309 LPIN2Q92539 896 aa18.29■□□□□ 0.52
SNRPA1-207ENST00000559309 EAF2Q96CJ1 260 aaPredicted RBP18.29■□□□□ 0.52
SNRPA1-207ENST00000559309 LRRCC1Q9C099 1032 aa18.29■□□□□ 0.52
SNRPA1-207ENST00000559309 GGA1Q9UJY5 639 aa18.29■□□□□ 0.52
SNRPA1-207ENST00000559309 FPGT-TNNI3KV9GXZ4 949 aa18.29■□□□□ 0.52
SNRPA1-207ENST00000559309 KIAA2012Q0VF49 1180 aa18.28■□□□□ 0.52
SNRPA1-207ENST00000559309 CENPQQ7L2Z9 268 aaPredicted RBP18.28■□□□□ 0.52
SNRPA1-207ENST00000559309 TXNRD3Q86VQ6 643 aa18.28■□□□□ 0.52
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