RNA–Protein interactions for RNA: ENST00000559289.1

SHC4-206, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-206ENST00000559289 SRGAP3O43295 1099 aa7.41□□□□□ -1.22
SHC4-206ENST00000559289 RPS8P62241 208 aaKnown RBP7.41□□□□□ -1.22
SHC4-206ENST00000559289 IFIT5Q13325 482 aaKnown RBP7.41□□□□□ -1.22
SHC4-206ENST00000559289 LRRC24Q50LG9 513 aa7.41□□□□□ -1.22
SHC4-206ENST00000559289 PRPF40BQ6NWY9 871 aaKnown RBP7.41□□□□□ -1.22
SHC4-206ENST00000559289 OLFM4Q6UX06 510 aa7.41□□□□□ -1.22
SHC4-206ENST00000559289 DDX46Q7L014 1031 aaKnown RBP7.41□□□□□ -1.22
SHC4-206ENST00000559289 ATG9AQ7Z3C6 839 aa7.41□□□□□ -1.22
SHC4-206ENST00000559289 RPAP2Q8IXW5 612 aaPredicted RBP7.41□□□□□ -1.22
SHC4-206ENST00000559289 RPGRQ92834 1020 aaKnown RBP7.41□□□□□ -1.22
SHC4-206ENST00000559289 CHMP4BQ9H444 224 aaKnown RBP7.41□□□□□ -1.22
SHC4-206ENST00000559289 WWC3Q9ULE0 1092 aa7.41□□□□□ -1.22
SHC4-206ENST00000559289 HDAC5Q9UQL6 1122 aa7.41□□□□□ -1.22
SHC4-206ENST00000559289 CHMP3Q9Y3E7 222 aa7.41□□□□□ -1.22
SHC4-206ENST00000559289 RIPOR2Q9Y4F9 1068 aa7.41□□□□□ -1.22
SHC4-206ENST00000559289 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.41□□□□□ -1.22
SHC4-206ENST00000559289 WTIPA6NIX2 430 aaPredicted RBP7.4□□□□□ -1.22
SHC4-206ENST00000559289 IGHDP01880 384 aa7.4□□□□□ -1.22
SHC4-206ENST00000559289 ALDH1B1P30837 517 aa7.4□□□□□ -1.22
SHC4-206ENST00000559289 AAMPQ13685 434 aa7.4□□□□□ -1.22
SHC4-206ENST00000559289 CCDC57Q2TAC2 916 aa7.4□□□□□ -1.22
SHC4-206ENST00000559289 ANKRD18AQ8IVF6 992 aa7.4□□□□□ -1.22
SHC4-206ENST00000559289 HOMEZQ8IX15 550 aa7.4□□□□□ -1.22
SHC4-206ENST00000559289 TTLL6Q8N841 843 aa7.4□□□□□ -1.22
SHC4-206ENST00000559289 VGLL2Q8N8G2 317 aa7.4□□□□□ -1.22
SHC4-206ENST00000559289 CNKSR1Q969H4 720 aa7.4□□□□□ -1.22
SHC4-206ENST00000559289 CDC5LQ99459 802 aaKnown RBP7.4□□□□□ -1.22
SHC4-206ENST00000559289 COPRSQ9NQ92 184 aa7.4□□□□□ -1.22
SHC4-206ENST00000559289 BSDC1Q9NW68 430 aaPredicted RBP7.4□□□□□ -1.22
SHC4-206ENST00000559289 PIM2Q9P1W9 311 aa7.4□□□□□ -1.22
SHC4-206ENST00000559289 SBF1O95248 1867 aa7.39□□□□□ -1.23
SHC4-206ENST00000559289 CCDC88AQ3V6T2 1871 aa7.39□□□□□ -1.23
SHC4-206ENST00000559289 ARAP2Q8WZ64 1704 aa7.39□□□□□ -1.23
SHC4-206ENST00000559289 PPEF1O14829 653 aaPredicted RBP7.39□□□□□ -1.23
SHC4-206ENST00000559289 BBOX1O75936 387 aa7.39□□□□□ -1.23
SHC4-206ENST00000559289 YBX3P16989 372 aaKnown RBP eCLIP7.39□□□□□ -1.23
SHC4-206ENST00000559289 SP8Q8IXZ3 490 aa7.39□□□□□ -1.23
SHC4-206ENST00000559289 MINPP1Q9UNW1 487 aa7.39□□□□□ -1.23
SHC4-206ENST00000559289 NOP58Q9Y2X3 529 aaKnown RBP7.39□□□□□ -1.23
SHC4-206ENST00000559289 ZBTB12Q9Y330 459 aaPredicted RBP7.39□□□□□ -1.23
SHC4-206ENST00000559289 ATP6V0A2Q9Y487 856 aa7.39□□□□□ -1.23
SHC4-206ENST00000559289 IRS2Q9Y4H2 1338 aa7.38□□□□□ -1.23
SHC4-206ENST00000559289 SNAP23O00161 211 aa7.38□□□□□ -1.23
SHC4-206ENST00000559289 EYA2O00167 538 aa7.38□□□□□ -1.23
SHC4-206ENST00000559289 C21orf2O43822 256 aa7.38□□□□□ -1.23
SHC4-206ENST00000559289 CIAO1O76071 339 aa7.38□□□□□ -1.23
SHC4-206ENST00000559289 SASH1O94885 1247 aa7.38□□□□□ -1.23
SHC4-206ENST00000559289 IGHMBP2P38935 993 aaKnown RBP7.38□□□□□ -1.23
SHC4-206ENST00000559289 PRELPP51888 382 aa7.38□□□□□ -1.23
SHC4-206ENST00000559289 GPSM2P81274 684 aa7.38□□□□□ -1.23
SHC4-206ENST00000559289 CHRNDQ07001 517 aa7.38□□□□□ -1.23
SHC4-206ENST00000559289 HDAC1Q13547 482 aaPredicted RBP7.38□□□□□ -1.23
SHC4-206ENST00000559289 DALRD3Q5D0E6 543 aaKnown RBP7.38□□□□□ -1.23
SHC4-206ENST00000559289 LDHAL6AQ6ZMR3 332 aa7.38□□□□□ -1.23
SHC4-206ENST00000559289 SIL1Q9H173 461 aa7.38□□□□□ -1.23
SHC4-206ENST00000559289 FBXO3Q9UK99 471 aa7.38□□□□□ -1.23
SHC4-206ENST00000559289 BCS1LQ9Y276 419 aa7.38□□□□□ -1.23
SHC4-206ENST00000559289 EXOC6BQ9Y2D4 811 aa7.38□□□□□ -1.23
SHC4-206ENST00000559289 ZNF646O15015 1829 aaPredicted RBP7.37□□□□□ -1.23
SHC4-206ENST00000559289 NFKBIEO00221 500 aa7.37□□□□□ -1.23
SHC4-206ENST00000559289 TAF5LO75529 589 aa7.37□□□□□ -1.23
SHC4-206ENST00000559289 SURF6O75683 361 aaKnown RBP7.37□□□□□ -1.23
SHC4-206ENST00000559289 TAF7LQ5H9L4 462 aa7.37□□□□□ -1.23
SHC4-206ENST00000559289 TMC4Q7Z404 712 aa7.37□□□□□ -1.23
SHC4-206ENST00000559289 HELBQ8NG08 1087 aaPredicted RBP7.37□□□□□ -1.23
SHC4-206ENST00000559289 MPHOSPH8Q99549 860 aa7.37□□□□□ -1.23
SHC4-206ENST00000559289 DCTPP1Q9H773 170 aa7.37□□□□□ -1.23
SHC4-206ENST00000559289 PODXL2Q9NZ53 605 aa7.37□□□□□ -1.23
SHC4-206ENST00000559289 COL4A5P29400 1685 aa7.37□□□□□ -1.23
SHC4-206ENST00000559289 CHD4Q14839 1912 aa7.37□□□□□ -1.23
SHC4-206ENST00000559289 DICER1Q9UPY3 1922 aaKnown RBP7.37□□□□□ -1.23
SHC4-206ENST00000559289 KDM2BQ8NHM5 1336 aa7.36□□□□□ -1.23
SHC4-206ENST00000559289 HMMRO75330 724 aa7.36□□□□□ -1.23
SHC4-206ENST00000559289 PDE8BO95263 885 aa7.36□□□□□ -1.23
SHC4-206ENST00000559289 NEFLP07196 543 aa7.36□□□□□ -1.23
SHC4-206ENST00000559289 FGFR2P21802 821 aa7.36□□□□□ -1.23
SHC4-206ENST00000559289 IL15P40933 162 aaPredicted RBP7.36□□□□□ -1.23
SHC4-206ENST00000559289 TFCP2Q12800 502 aa7.36□□□□□ -1.23
SHC4-206ENST00000559289 CCDC93Q567U6 631 aa7.36□□□□□ -1.23
SHC4-206ENST00000559289 ERICH6BQ5W0A0 696 aa7.36□□□□□ -1.23
SHC4-206ENST00000559289 SMC5Q8IY18 1101 aa7.36□□□□□ -1.23
SHC4-206ENST00000559289 RHPN1Q8TCX5 695 aa7.36□□□□□ -1.23
SHC4-206ENST00000559289 RTFDC1Q9BY42 306 aaPredicted RBP7.36□□□□□ -1.23
SHC4-206ENST00000559289 CNNM1Q9NRU3 951 aa7.36□□□□□ -1.23
SHC4-206ENST00000559289 POLLQ9UGP5 575 aa7.36□□□□□ -1.23
SHC4-206ENST00000559289 UTRNP46939 3433 aa7.36□□□□□ -1.23
SHC4-206ENST00000559289 ZNF609O15014 1411 aa7.35□□□□□ -1.23
SHC4-206ENST00000559289 XDHP47989 1333 aa7.35□□□□□ -1.23
SHC4-206ENST00000559289 MROH5Q6ZUA9 1318 aa7.35□□□□□ -1.23
SHC4-206ENST00000559289 LTBP3Q9NS15 1303 aa7.35□□□□□ -1.23
SHC4-206ENST00000559289 KLRK1P26718 216 aa7.35□□□□□ -1.23
SHC4-206ENST00000559289 RASSF7Q02833 373 aa7.35□□□□□ -1.23
SHC4-206ENST00000559289 G3BP1Q13283 466 aaKnown RBP eCLIP7.35□□□□□ -1.23
SHC4-206ENST00000559289 METTL24Q5JXM2 366 aa7.35□□□□□ -1.23
SHC4-206ENST00000559289 CC2D2BQ6DHV5 1058 aa7.35□□□□□ -1.23
SHC4-206ENST00000559289 TXNRD3Q86VQ6 643 aa7.35□□□□□ -1.23
SHC4-206ENST00000559289 MPNDQ8N594 471 aa7.35□□□□□ -1.23
SHC4-206ENST00000559289 TBC1D16Q8TBP0 767 aa7.35□□□□□ -1.23
SHC4-206ENST00000559289 GPR101Q96P66 508 aaPredicted RBP7.35□□□□□ -1.23
SHC4-206ENST00000559289 NSFL1CQ9UNZ2 370 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms