RNA–Protein interactions for RNA: ENST00000559274.1

MARK3-218, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 1,053 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-218ENST00000559274 PODXL2Q9NZ53 605 aa11.78□□□□□ -0.52
MARK3-218ENST00000559274 GGA1Q9UJY5 639 aa11.78□□□□□ -0.52
MARK3-218ENST00000559274 SCN4AP35499 1836 aa11.77□□□□□ -0.52
MARK3-218ENST00000559274 NEURL1BA8MQ27 555 aa11.77□□□□□ -0.53
MARK3-218ENST00000559274 ATP2B4P23634 1241 aa11.77□□□□□ -0.53
MARK3-218ENST00000559274 CTSWP56202 376 aa11.77□□□□□ -0.53
MARK3-218ENST00000559274 GCKRQ14397 625 aa11.77□□□□□ -0.53
MARK3-218ENST00000559274 C3orf67Q6ZVT6 689 aa11.77□□□□□ -0.53
MARK3-218ENST00000559274 BSDC1Q9NW68 430 aaPredicted RBP11.77□□□□□ -0.53
MARK3-218ENST00000559274 CACNA1FO60840 1977 aa11.77□□□□□ -0.53
MARK3-218ENST00000559274 XDHP47989 1333 aa11.77□□□□□ -0.53
MARK3-218ENST00000559274 TIAM2Q8IVF5 1701 aa11.77□□□□□ -0.53
MARK3-218ENST00000559274 CCDC88AQ3V6T2 1871 aa11.76□□□□□ -0.53
MARK3-218ENST00000559274 H7C1W4 665 aa11.76□□□□□ -0.53
MARK3-218ENST00000559274 ALDH1L1O75891 902 aa11.76□□□□□ -0.53
MARK3-218ENST00000559274 OLFM4Q6UX06 510 aa11.76□□□□□ -0.53
MARK3-218ENST00000559274 DPF2Q92785 391 aa11.76□□□□□ -0.53
MARK3-218ENST00000559274 KLRG1Q96E93 195 aa11.76□□□□□ -0.53
MARK3-218ENST00000559274 PLA2G12BQ9BX93 195 aa11.76□□□□□ -0.53
MARK3-218ENST00000559274 C9orf78Q9NZ63 289 aaPredicted RBP11.76□□□□□ -0.53
MARK3-218ENST00000559274 RTL9Q8NET4 1388 aa11.76□□□□□ -0.53
MARK3-218ENST00000559274 POTECB2RU33 542 aa11.75□□□□□ -0.53
MARK3-218ENST00000559274 CLCN6P51797 869 aa11.75□□□□□ -0.53
MARK3-218ENST00000559274 UBE3BQ7Z3V4 1068 aa11.75□□□□□ -0.53
MARK3-218ENST00000559274 PODNQ7Z5L7 613 aa11.75□□□□□ -0.53
MARK3-218ENST00000559274 CELF1Q92879 486 aaKnown RBP11.75□□□□□ -0.53
MARK3-218ENST00000559274 LEMD3Q9Y2U8 911 aa11.75□□□□□ -0.53
MARK3-218ENST00000559274 PTPRCP08575 1304 aa11.75□□□□□ -0.53
MARK3-218ENST00000559274 ZNF541Q9H0D2 1346 aa11.75□□□□□ -0.53
MARK3-218ENST00000559274 CACNA1SQ13698 1873 aa11.74□□□□□ -0.53
MARK3-218ENST00000559274 ANKRD18BA2A2Z9 1011 aa11.74□□□□□ -0.53
MARK3-218ENST00000559274 TMEM88BA6NKF7 163 aa11.74□□□□□ -0.53
MARK3-218ENST00000559274 UFL1O94874 794 aa11.74□□□□□ -0.53
MARK3-218ENST00000559274 IGKV5-2P06315 115 aa11.74□□□□□ -0.53
MARK3-218ENST00000559274 KCNJ4P48050 445 aa11.74□□□□□ -0.53
MARK3-218ENST00000559274 CXCL9Q07325 125 aa11.74□□□□□ -0.53
MARK3-218ENST00000559274 IFIT5Q13325 482 aaKnown RBP11.74□□□□□ -0.53
MARK3-218ENST00000559274 CCDC57Q2TAC2 916 aa11.74□□□□□ -0.53
MARK3-218ENST00000559274 TAF7LQ5H9L4 462 aa11.74□□□□□ -0.53
MARK3-218ENST00000559274 MIER1Q8N108 512 aa11.74□□□□□ -0.53
MARK3-218ENST00000559274 CNTROBQ8N137 903 aa11.74□□□□□ -0.53
MARK3-218ENST00000559274 TTLL11Q8NHH1 800 aa11.74□□□□□ -0.53
MARK3-218ENST00000559274 TBC1D16Q8TBP0 767 aa11.74□□□□□ -0.53
MARK3-218ENST00000559274 SRCIN1Q9C0H9 1055 aa11.74□□□□□ -0.53
MARK3-218ENST00000559274 GPRC5DQ9NZD1 345 aa11.74□□□□□ -0.53
MARK3-218ENST00000559274 CWF19L2Q2TBE0 894 aaKnown RBP11.73□□□□□ -0.53
MARK3-218ENST00000559274 ALDH1L2Q3SY69 923 aa11.73□□□□□ -0.53
MARK3-218ENST00000559274 OGFOD1Q8N543 542 aa11.73□□□□□ -0.53
MARK3-218ENST00000559274 SNED1Q8TER0 1413 aa11.73□□□□□ -0.53
MARK3-218ENST00000559274 MYO3BQ8WXR4 1341 aa11.72□□□□□ -0.53
MARK3-218ENST00000559274 ECE1P42892 770 aa11.72□□□□□ -0.53
MARK3-218ENST00000559274 GPSM2P81274 684 aa11.72□□□□□ -0.53
MARK3-218ENST00000559274 SLC4A10Q6U841 1118 aa11.72□□□□□ -0.53
MARK3-218ENST00000559274 DNAJC5GQ8N7S2 189 aa11.72□□□□□ -0.53
MARK3-218ENST00000559274 AGBL3Q8NEM8 1001 aa11.72□□□□□ -0.53
MARK3-218ENST00000559274 CNOT7Q9UIV1 285 aaKnown RBP11.72□□□□□ -0.53
MARK3-218ENST00000559274 FBXO3Q9UK99 471 aa11.72□□□□□ -0.53
MARK3-218ENST00000559274 GRM8O00222 908 aa11.71□□□□□ -0.53
MARK3-218ENST00000559274 RIMBP2O15034 1052 aa11.71□□□□□ -0.53
MARK3-218ENST00000559274 ECE2O60344 883 aa11.71□□□□□ -0.53
MARK3-218ENST00000559274 RAD17O75943 681 aa11.71□□□□□ -0.53
MARK3-218ENST00000559274 CSF1RP07333 972 aa11.71□□□□□ -0.53
MARK3-218ENST00000559274 ITGA6P23229 1130 aa11.71□□□□□ -0.53
MARK3-218ENST00000559274 GMPSP49915 693 aaPredicted RBP11.71□□□□□ -0.53
MARK3-218ENST00000559274 SCNN1DP51172 638 aa11.71□□□□□ -0.53
MARK3-218ENST00000559274 CDC37L1Q7L3B6 337 aa11.71□□□□□ -0.53
MARK3-218ENST00000559274 G2E3Q7L622 706 aa11.71□□□□□ -0.53
MARK3-218ENST00000559274 JMYQ8N9B5 988 aa11.71□□□□□ -0.53
MARK3-218ENST00000559274 DCBLD2Q96PD2 775 aa11.71□□□□□ -0.53
MARK3-218ENST00000559274 COA1Q9GZY4 146 aa11.71□□□□□ -0.53
MARK3-218ENST00000559274 SEC31BQ9NQW1 1179 aa11.71□□□□□ -0.53
MARK3-218ENST00000559274 POLLQ9UGP5 575 aa11.71□□□□□ -0.53
MARK3-218ENST00000559274 CHMP3Q9Y3E7 222 aa11.71□□□□□ -0.53
MARK3-218ENST00000559274 CEP350Q5VT06 3117 aa11.7□□□□□ -0.54
MARK3-218ENST00000559274 ZNF521Q96K83 1311 aa11.7□□□□□ -0.54
MARK3-218ENST00000559274 IPO8O15397 1037 aaKnown RBP11.7□□□□□ -0.54
MARK3-218ENST00000559274 SLFN5Q08AF3 891 aa11.7□□□□□ -0.54
MARK3-218ENST00000559274 BEND3Q5T5X7 828 aa11.7□□□□□ -0.54
MARK3-218ENST00000559274 ZNF579Q8NAF0 562 aaKnown RBP11.7□□□□□ -0.54
MARK3-218ENST00000559274 AIDAQ96BJ3 306 aa11.7□□□□□ -0.54
MARK3-218ENST00000559274 DCPSQ96C86 337 aaKnown RBP11.7□□□□□ -0.54
MARK3-218ENST00000559274 BEGAINQ9BUH8 593 aa11.7□□□□□ -0.54
MARK3-218ENST00000559274 GREM2Q9H772 168 aa11.7□□□□□ -0.54
MARK3-218ENST00000559274 HDAC9Q9UKV0 1011 aa11.7□□□□□ -0.54
MARK3-218ENST00000559274 MINPP1Q9UNW1 487 aa11.7□□□□□ -0.54
MARK3-218ENST00000559274 PASKQ96RG2 1323 aa11.69□□□□□ -0.54
MARK3-218ENST00000559274 USP17L3A6NCW0 530 aa11.69□□□□□ -0.54
MARK3-218ENST00000559274 USP17L4A6NCW7 530 aa11.69□□□□□ -0.54
MARK3-218ENST00000559274 VIL1P09327 827 aaKnown RBP11.69□□□□□ -0.54
MARK3-218ENST00000559274 EPS15P42566 896 aa11.69□□□□□ -0.54
MARK3-218ENST00000559274 CCT4P50991 539 aaKnown RBP11.69□□□□□ -0.54
MARK3-218ENST00000559274 MAP1SQ66K74 1059 aaPredicted RBP11.69□□□□□ -0.54
MARK3-218ENST00000559274 USP17L1Q7RTZ2 530 aa11.69□□□□□ -0.54
MARK3-218ENST00000559274 CCDC85AQ96PX6 553 aaPredicted RBP11.69□□□□□ -0.54
MARK3-218ENST00000559274 DBNDD1Q9H9R9 158 aa11.69□□□□□ -0.54
MARK3-218ENST00000559274 ABT1Q9ULW3 272 aaKnown RBP11.69□□□□□ -0.54
MARK3-218ENST00000559274 MED23Q9ULK4 1368 aa11.68□□□□□ -0.54
MARK3-218ENST00000559274 PSMD14O00487 310 aa11.68□□□□□ -0.54
MARK3-218ENST00000559274 ITGBL1O95965 494 aaPredicted RBP11.68□□□□□ -0.54
MARK3-218ENST00000559274 MAP2K1Q02750 393 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms