RNA–Protein interactions for RNA: ENST00000559035.5

HMG20A-207, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-207ENST00000559035 CFHR5Q9BXR6 569 aa9.91□□□□□ -0.82
HMG20A-207ENST00000559035 KCNQ5Q9NR82 932 aa9.91□□□□□ -0.82
HMG20A-207ENST00000559035 PITPNM2Q9BZ72 1349 aa9.9□□□□□ -0.82
HMG20A-207ENST00000559035 GPSM2P81274 684 aa9.9□□□□□ -0.82
HMG20A-207ENST00000559035 TCIRG1Q13488 830 aa9.9□□□□□ -0.82
HMG20A-207ENST00000559035 SF3B3Q15393 1217 aaKnown RBP9.9□□□□□ -0.82
HMG20A-207ENST00000559035 SULF1Q8IWU6 871 aa9.9□□□□□ -0.82
HMG20A-207ENST00000559035 PCGF6Q9BYE7 350 aa9.9□□□□□ -0.82
HMG20A-207ENST00000559035 CEP290O15078 2479 aa9.9□□□□□ -0.83
HMG20A-207ENST00000559035 FBXO46Q6PJ61 603 aaPredicted RBP9.89□□□□□ -0.83
HMG20A-207ENST00000559035 TBC1D16Q8TBP0 767 aa9.89□□□□□ -0.83
HMG20A-207ENST00000559035 XAGE3Q8WTP9 111 aa9.89□□□□□ -0.83
HMG20A-207ENST00000559035 GMLQ99445 158 aa9.89□□□□□ -0.83
HMG20A-207ENST00000559035 PODXL2Q9NZ53 605 aa9.89□□□□□ -0.83
HMG20A-207ENST00000559035 TRMT112Q9UI30 125 aaKnown RBP9.89□□□□□ -0.83
HMG20A-207ENST00000559035 ANGEL2Q5VTE6 544 aaKnown RBP9.88□□□□□ -0.83
HMG20A-207ENST00000559035 COPS6Q7L5N1 327 aa9.88□□□□□ -0.83
HMG20A-207ENST00000559035 GCC1Q96CN9 775 aa9.88□□□□□ -0.83
HMG20A-207ENST00000559035 ISCA1Q9BUE6 129 aa9.88□□□□□ -0.83
HMG20A-207ENST00000559035 TSPYL4Q9UJ04 414 aa9.88□□□□□ -0.83
HMG20A-207ENST00000559035 NSFL1CQ9UNZ2 370 aaKnown RBP9.88□□□□□ -0.83
HMG20A-207ENST00000559035 GPR25O00155 361 aa9.87□□□□□ -0.83
HMG20A-207ENST00000559035 RIMBP2O15034 1052 aa9.87□□□□□ -0.83
HMG20A-207ENST00000559035 TM4SF4P48230 202 aa9.87□□□□□ -0.83
HMG20A-207ENST00000559035 DOK7Q18PE1 504 aa9.87□□□□□ -0.83
HMG20A-207ENST00000559035 HABP4Q5JVS0 413 aaKnown RBP9.87□□□□□ -0.83
HMG20A-207ENST00000559035 RBM26Q5T8P6 1007 aaKnown RBP9.87□□□□□ -0.83
HMG20A-207ENST00000559035 MOB2Q70IA6 237 aa9.87□□□□□ -0.83
HMG20A-207ENST00000559035 AGBL3Q8NEM8 1001 aa9.87□□□□□ -0.83
HMG20A-207ENST00000559035 EYA3Q99504 573 aa9.87□□□□□ -0.83
HMG20A-207ENST00000559035 BABAM1Q9NWV8 329 aa9.87□□□□□ -0.83
HMG20A-207ENST00000559035 KIAA0100Q14667 2235 aaKnown RBP9.87□□□□□ -0.83
HMG20A-207ENST00000559035 TRIOBPQ9H2D6 2365 aa9.86□□□□□ -0.83
HMG20A-207ENST00000559035 TBC1D8O95759 1140 aa9.86□□□□□ -0.83
HMG20A-207ENST00000559035 EIF2S2P20042 333 aaKnown RBP9.86□□□□□ -0.83
HMG20A-207ENST00000559035 SCARF1Q14162 830 aa9.86□□□□□ -0.83
HMG20A-207ENST00000559035 RSBN1LQ6PCB5 846 aaPredicted RBP9.86□□□□□ -0.83
HMG20A-207ENST00000559035 NECTIN2Q92692 538 aa9.86□□□□□ -0.83
HMG20A-207ENST00000559035 LAMA3Q16787 3333 aa9.86□□□□□ -0.83
HMG20A-207ENST00000559035 SSC5DA1L4H1 1573 aa9.85□□□□□ -0.83
HMG20A-207ENST00000559035 CUL9Q8IWT3 2517 aa9.85□□□□□ -0.83
HMG20A-207ENST00000559035 C6orf229H3BNL8 230 aa9.85□□□□□ -0.83
HMG20A-207ENST00000559035 PLBD2Q8NHP8 589 aa9.85□□□□□ -0.83
HMG20A-207ENST00000559035 FAM89AQ96GI7 184 aa9.85□□□□□ -0.83
HMG20A-207ENST00000559035 R3HDMLQ9H3Y0 253 aa9.85□□□□□ -0.83
HMG20A-207ENST00000559035 MYOZ2Q9NPC6 264 aa9.85□□□□□ -0.83
HMG20A-207ENST00000559035 HDAC9Q9UKV0 1011 aa9.85□□□□□ -0.83
HMG20A-207ENST00000559035 UBE2Q2LH0YL09 131 aa9.84□□□□□ -0.83
HMG20A-207ENST00000559035 UFL1O94874 794 aa9.84□□□□□ -0.83
HMG20A-207ENST00000559035 FXR1P51114 621 aaKnown RBP eCLIP9.84□□□□□ -0.83
HMG20A-207ENST00000559035 AIMP1Q12904 312 aaKnown RBP9.84□□□□□ -0.83
HMG20A-207ENST00000559035 TRIM28Q13263 835 aaKnown RBP9.84□□□□□ -0.83
HMG20A-207ENST00000559035 KRT24Q2M2I5 525 aa9.84□□□□□ -0.83
HMG20A-207ENST00000559035 CHPF2Q9P2E5 772 aa9.84□□□□□ -0.83
HMG20A-207ENST00000559035 COL1A1P02452 1464 aaPredicted RBP9.84□□□□□ -0.83
HMG20A-207ENST00000559035 POTEFA5A3E0 1075 aa9.83□□□□□ -0.84
HMG20A-207ENST00000559035 FKTNO75072 461 aa9.83□□□□□ -0.84
HMG20A-207ENST00000559035 NEFMP07197 916 aa9.83□□□□□ -0.84
HMG20A-207ENST00000559035 RPS8P62241 208 aaKnown RBP9.83□□□□□ -0.84
HMG20A-207ENST00000559035 ZNF428Q96B54 188 aa9.83□□□□□ -0.84
HMG20A-207ENST00000559035 ZC3H12CQ9C0D7 883 aaKnown RBP9.83□□□□□ -0.84
HMG20A-207ENST00000559035 SEC31BQ9NQW1 1179 aa9.83□□□□□ -0.84
HMG20A-207ENST00000559035 SCAF8Q9UPN6 1271 aaKnown RBP9.83□□□□□ -0.84
HMG20A-207ENST00000559035 MED23Q9ULK4 1368 aa9.83□□□□□ -0.84
HMG20A-207ENST00000559035 MAPK8IP3Q9UPT6 1336 aa9.82□□□□□ -0.84
HMG20A-207ENST00000559035 IRS4O14654 1257 aaPredicted RBP9.82□□□□□ -0.84
HMG20A-207ENST00000559035 HOXB7P09629 217 aa9.82□□□□□ -0.84
HMG20A-207ENST00000559035 USP17L8P0C7I0 530 aa9.82□□□□□ -0.84
HMG20A-207ENST00000559035 SREBF2Q12772 1141 aa9.82□□□□□ -0.84
HMG20A-207ENST00000559035 LDLRAD1Q5T700 205 aa9.82□□□□□ -0.84
HMG20A-207ENST00000559035 GGA1Q9UJY5 639 aa9.82□□□□□ -0.84
HMG20A-207ENST00000559035 XDHP47989 1333 aa9.82□□□□□ -0.84
HMG20A-207ENST00000559035 A0A0C4DFX4 3053 aa9.81□□□□□ -0.84
HMG20A-207ENST00000559035 COL6A3P12111 3177 aa9.81□□□□□ -0.84
HMG20A-207ENST00000559035 ATP5J2-PTCD1G3V325 749 aa9.81□□□□□ -0.84
HMG20A-207ENST00000559035 CHL1O00533 1208 aa9.81□□□□□ -0.84
HMG20A-207ENST00000559035 WNT10BO00744 389 aa9.81□□□□□ -0.84
HMG20A-207ENST00000559035 NBPF9Q3BBW0 867 aa9.81□□□□□ -0.84
HMG20A-207ENST00000559035 DACT2Q5SW24 774 aa9.81□□□□□ -0.84
HMG20A-207ENST00000559035 PRAMEF18Q5VWM3 479 aa9.81□□□□□ -0.84
HMG20A-207ENST00000559035 OTOP1Q7RTM1 612 aa9.81□□□□□ -0.84
HMG20A-207ENST00000559035 CCER1Q8TC90 406 aaPredicted RBP9.81□□□□□ -0.84
HMG20A-207ENST00000559035 ECM29Q5VYK3 1845 aa9.81□□□□□ -0.84
HMG20A-207ENST00000559035 SPEF2Q9C093 1822 aa9.81□□□□□ -0.84
HMG20A-207ENST00000559035 OTOFQ9HC10 1997 aa9.81□□□□□ -0.84
HMG20A-207ENST00000559035 USP17L3A6NCW0 530 aa9.8□□□□□ -0.84
HMG20A-207ENST00000559035 USP17L4A6NCW7 530 aa9.8□□□□□ -0.84
HMG20A-207ENST00000559035 TMPOP42166 694 aaKnown RBP9.8□□□□□ -0.84
HMG20A-207ENST00000559035 PTPN12Q05209 780 aaKnown RBP9.8□□□□□ -0.84
HMG20A-207ENST00000559035 SPRYD7Q5W111 196 aa9.8□□□□□ -0.84
HMG20A-207ENST00000559035 ANKRD13DQ6ZTN6 518 aa9.8□□□□□ -0.84
HMG20A-207ENST00000559035 USP17L1Q7RTZ2 530 aa9.8□□□□□ -0.84
HMG20A-207ENST00000559035 PODNQ7Z5L7 613 aa9.8□□□□□ -0.84
HMG20A-207ENST00000559035 ZBTB38Q8NAP3 1195 aaPredicted RBP9.8□□□□□ -0.84
HMG20A-207ENST00000559035 ARMC5Q96C12 935 aa9.8□□□□□ -0.84
HMG20A-207ENST00000559035 ZBED3Q96IU2 234 aaPredicted RBP9.8□□□□□ -0.84
HMG20A-207ENST00000559035 A0A1B0GUL6 1792 aa9.79□□□□□ -0.84
HMG20A-207ENST00000559035 IGF2BP3O00425 579 aaKnown RBP eCLIP9.79□□□□□ -0.84
HMG20A-207ENST00000559035 ALDH1A1P00352 501 aa9.79□□□□□ -0.84
HMG20A-207ENST00000559035 RIPK4P57078 832 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms