RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 PELP1Q8IZL8 1130 aaKnown RBP8.16□□□□□ -1.1
CHRNA3-204ENST00000559002 PUS3Q9BZE2 481 aaKnown RBP8.16□□□□□ -1.1
CHRNA3-204ENST00000559002 ANKRD2Q9GZV1 360 aa8.16□□□□□ -1.1
CHRNA3-204ENST00000559002 PPP4R2Q9NY27 417 aa8.16□□□□□ -1.1
CHRNA3-204ENST00000559002 ANKIB1Q9P2G1 1089 aa8.16□□□□□ -1.1
CHRNA3-204ENST00000559002 EXOC6BQ9Y2D4 811 aa8.16□□□□□ -1.1
CHRNA3-204ENST00000559002 ATP6V0A2Q9Y487 856 aa8.16□□□□□ -1.1
CHRNA3-204ENST00000559002 GTF3C3Q9Y5Q9 886 aa8.16□□□□□ -1.1
CHRNA3-204ENST00000559002 XDHP47989 1333 aa8.15□□□□□ -1.1
CHRNA3-204ENST00000559002 C21orf2O43822 256 aa8.15□□□□□ -1.1
CHRNA3-204ENST00000559002 RAB11FIP3O75154 756 aa8.15□□□□□ -1.1
CHRNA3-204ENST00000559002 IGHDP01880 384 aa8.15□□□□□ -1.1
CHRNA3-204ENST00000559002 KCNJ4P48050 445 aa8.15□□□□□ -1.1
CHRNA3-204ENST00000559002 CHRNDQ07001 517 aa8.15□□□□□ -1.1
CHRNA3-204ENST00000559002 CCDC93Q567U6 631 aa8.15□□□□□ -1.1
CHRNA3-204ENST00000559002 CC2D2BQ6DHV5 1058 aa8.15□□□□□ -1.1
CHRNA3-204ENST00000559002 ATG9AQ7Z3C6 839 aa8.15□□□□□ -1.1
CHRNA3-204ENST00000559002 SP8Q8IXZ3 490 aa8.15□□□□□ -1.1
CHRNA3-204ENST00000559002 GCC1Q96CN9 775 aa8.15□□□□□ -1.1
CHRNA3-204ENST00000559002 DCTPP1Q9H773 170 aa8.15□□□□□ -1.1
CHRNA3-204ENST00000559002 CEP126Q9P2H0 1117 aa8.15□□□□□ -1.1
CHRNA3-204ENST00000559002 MINPP1Q9UNW1 487 aa8.15□□□□□ -1.1
CHRNA3-204ENST00000559002 NOP58Q9Y2X3 529 aaKnown RBP8.15□□□□□ -1.1
CHRNA3-204ENST00000559002 DLEC1Q9Y238 1755 aa8.15□□□□□ -1.11
CHRNA3-204ENST00000559002 KIAA1551Q9HCM1 1747 aa8.15□□□□□ -1.11
CHRNA3-204ENST00000559002 COL4A1P02462 1669 aa8.14□□□□□ -1.11
CHRNA3-204ENST00000559002 TFCP2Q12800 502 aa8.14□□□□□ -1.11
CHRNA3-204ENST00000559002 GRIPAP1Q4V328 841 aa8.14□□□□□ -1.11
CHRNA3-204ENST00000559002 DPP8Q6V1X1 898 aaPredicted RBP8.14□□□□□ -1.11
CHRNA3-204ENST00000559002 MPNDQ8N594 471 aa8.14□□□□□ -1.11
CHRNA3-204ENST00000559002 HELBQ8NG08 1087 aaPredicted RBP8.14□□□□□ -1.11
CHRNA3-204ENST00000559002 KIF1BPQ96EK5 621 aa8.14□□□□□ -1.11
CHRNA3-204ENST00000559002 LRRCC1Q9C099 1032 aa8.14□□□□□ -1.11
CHRNA3-204ENST00000559002 BCL11AQ9H165 835 aa8.14□□□□□ -1.11
CHRNA3-204ENST00000559002 NSFL1CQ9UNZ2 370 aaKnown RBP8.14□□□□□ -1.11
CHRNA3-204ENST00000559002 RIPOR2Q9Y4F9 1068 aa8.14□□□□□ -1.11
CHRNA3-204ENST00000559002 TAF5LO75529 589 aa8.13□□□□□ -1.11
CHRNA3-204ENST00000559002 UFL1O94874 794 aa8.13□□□□□ -1.11
CHRNA3-204ENST00000559002 PDE8BO95263 885 aa8.13□□□□□ -1.11
CHRNA3-204ENST00000559002 ATP2B4P23634 1241 aa8.13□□□□□ -1.11
CHRNA3-204ENST00000559002 GPSM2P81274 684 aa8.13□□□□□ -1.11
CHRNA3-204ENST00000559002 PUM3Q15397 648 aaKnown RBP8.13□□□□□ -1.11
CHRNA3-204ENST00000559002 ATP2B3Q16720 1220 aa8.13□□□□□ -1.11
CHRNA3-204ENST00000559002 B4GALNT3Q6L9W6 998 aa8.13□□□□□ -1.11
CHRNA3-204ENST00000559002 OLFM4Q6UX06 510 aa8.13□□□□□ -1.11
CHRNA3-204ENST00000559002 CENPQQ7L2Z9 268 aaPredicted RBP8.13□□□□□ -1.11
CHRNA3-204ENST00000559002 SLC51AQ86UW1 340 aa8.13□□□□□ -1.11
CHRNA3-204ENST00000559002 RTKN2Q8IZC4 609 aa8.13□□□□□ -1.11
CHRNA3-204ENST00000559002 SUPT20HQ8NEM7 779 aa8.13□□□□□ -1.11
CHRNA3-204ENST00000559002 RHPN1Q8TCX5 695 aa8.13□□□□□ -1.11
CHRNA3-204ENST00000559002 C7orf43Q8WVR3 580 aa8.13□□□□□ -1.11
CHRNA3-204ENST00000559002 GGA1Q9UJY5 639 aa8.13□□□□□ -1.11
CHRNA3-204ENST00000559002 AKAP2Q9Y2D5 859 aa8.13□□□□□ -1.11
CHRNA3-204ENST00000559002 LEMD3Q9Y2U8 911 aa8.13□□□□□ -1.11
CHRNA3-204ENST00000559002 ZNF804BA4D1E1 1349 aa8.12□□□□□ -1.11
CHRNA3-204ENST00000559002 DCAF8L1A6NGE4 600 aa8.12□□□□□ -1.11
CHRNA3-204ENST00000559002 C6orf229H3BNL8 230 aa8.12□□□□□ -1.11
CHRNA3-204ENST00000559002 SASH1O94885 1247 aa8.12□□□□□ -1.11
CHRNA3-204ENST00000559002 IFIT1P09914 478 aaKnown RBP8.12□□□□□ -1.11
CHRNA3-204ENST00000559002 SLC5A1P13866 664 aa8.12□□□□□ -1.11
CHRNA3-204ENST00000559002 UBE4AQ14139 1066 aa8.12□□□□□ -1.11
CHRNA3-204ENST00000559002 GPR162Q16538 588 aa8.12□□□□□ -1.11
CHRNA3-204ENST00000559002 ANKRD45Q5TZF3 282 aa8.12□□□□□ -1.11
CHRNA3-204ENST00000559002 SMC5Q8IY18 1101 aa8.12□□□□□ -1.11
CHRNA3-204ENST00000559002 CLASRPQ8N2M8 674 aaKnown RBP8.12□□□□□ -1.11
CHRNA3-204ENST00000559002 VGLL2Q8N8G2 317 aa8.12□□□□□ -1.11
CHRNA3-204ENST00000559002 EYA3Q99504 573 aa8.12□□□□□ -1.11
CHRNA3-204ENST00000559002 IL1RAPL2Q9NP60 686 aa8.12□□□□□ -1.11
CHRNA3-204ENST00000559002 GPR108Q9NPR9 543 aa8.12□□□□□ -1.11
CHRNA3-204ENST00000559002 PODXL2Q9NZ53 605 aa8.12□□□□□ -1.11
CHRNA3-204ENST00000559002 SLX4Q8IY92 1834 aa8.12□□□□□ -1.11
CHRNA3-204ENST00000559002 SPEF2Q9C093 1822 aa8.12□□□□□ -1.11
CHRNA3-204ENST00000559002 TAF1P21675 1872 aa8.11□□□□□ -1.11
CHRNA3-204ENST00000559002 KDM2BQ8NHM5 1336 aa8.11□□□□□ -1.11
CHRNA3-204ENST00000559002 A0A1B0GUL7 405 aa8.11□□□□□ -1.11
CHRNA3-204ENST00000559002 SMARCA5O60264 1052 aaPredicted RBP8.11□□□□□ -1.11
CHRNA3-204ENST00000559002 IFIT2P09913 472 aaKnown RBP8.11□□□□□ -1.11
CHRNA3-204ENST00000559002 FKBP4Q02790 459 aaKnown RBP eCLIP8.11□□□□□ -1.11
CHRNA3-204ENST00000559002 TNNI3KQ59H18 835 aa8.11□□□□□ -1.11
CHRNA3-204ENST00000559002 GORABQ5T7V8 394 aa8.11□□□□□ -1.11
CHRNA3-204ENST00000559002 ARHGAP27Q6ZUM4 889 aa8.11□□□□□ -1.11
CHRNA3-204ENST00000559002 AACSQ86V21 672 aa8.11□□□□□ -1.11
CHRNA3-204ENST00000559002 TBC1D16Q8TBP0 767 aa8.11□□□□□ -1.11
CHRNA3-204ENST00000559002 LPIN2Q92539 896 aa8.11□□□□□ -1.11
CHRNA3-204ENST00000559002 NEUROD6Q96NK8 337 aa8.11□□□□□ -1.11
CHRNA3-204ENST00000559002 PSMD1Q99460 953 aa8.11□□□□□ -1.11
CHRNA3-204ENST00000559002 TAOK3Q9H2K8 898 aa8.11□□□□□ -1.11
CHRNA3-204ENST00000559002 FPGT-TNNI3KV9GXZ4 949 aa8.11□□□□□ -1.11
CHRNA3-204ENST00000559002 LRRC37AA6NMS7 1700 aa8.11□□□□□ -1.11
CHRNA3-204ENST00000559002 ZNF609O15014 1411 aa8.11□□□□□ -1.11
CHRNA3-204ENST00000559002 CACNA1SQ13698 1873 aa8.11□□□□□ -1.11
CHRNA3-204ENST00000559002 GOLGB1Q14789 3259 aaKnown RBP8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 G3V3G9 751 aa8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 SNAP23O00161 211 aa8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 PPIP5K2O43314 1243 aa8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 GRIN3BO60391 1043 aa8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 YBX3P16989 372 aaKnown RBP eCLIP8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 WASHC4Q2M389 1173 aa8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 CAVIN4Q5BKX8 364 aa8.1□□□□□ -1.11
CHRNA3-204ENST00000559002 DCAF8Q5TAQ9 597 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms