RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 RGS9O75916 674 aaPredicted RBP7.44□□□□□ -1.22
CASC4-206ENST00000558847 EGFRP00533 1210 aa7.44□□□□□ -1.22
CASC4-206ENST00000558847 ELNP15502 786 aa7.44□□□□□ -1.22
CASC4-206ENST00000558847 CCINQ13939 588 aa7.44□□□□□ -1.22
CASC4-206ENST00000558847 ATCAYQ86WG3 371 aa7.44□□□□□ -1.22
CASC4-206ENST00000558847 TUT1Q9H6E5 874 aaKnown RBP7.44□□□□□ -1.22
CASC4-206ENST00000558847 ANO2Q9NQ90 1003 aa7.44□□□□□ -1.22
CASC4-206ENST00000558847 EIF1AXP47813 144 aaKnown RBP7.43□□□□□ -1.22
CASC4-206ENST00000558847 NRG1Q02297 640 aaPredicted RBP7.43□□□□□ -1.22
CASC4-206ENST00000558847 ECM1Q16610 540 aa7.43□□□□□ -1.22
CASC4-206ENST00000558847 DMRTC2Q8IXT2 367 aaPredicted RBP7.43□□□□□ -1.22
CASC4-206ENST00000558847 ZFATQ9P243 1243 aa7.43□□□□□ -1.22
CASC4-206ENST00000558847 FAM13AO94988 1023 aa7.42□□□□□ -1.22
CASC4-206ENST00000558847 SELPP16109 830 aa7.42□□□□□ -1.22
CASC4-206ENST00000558847 MBTPS1Q14703 1052 aa7.42□□□□□ -1.22
CASC4-206ENST00000558847 PRSS36Q5K4E3 855 aa7.42□□□□□ -1.22
CASC4-206ENST00000558847 SHISA2Q6UWI4 295 aa7.42□□□□□ -1.22
CASC4-206ENST00000558847 KRT25Q7Z3Z0 450 aa7.42□□□□□ -1.22
CASC4-206ENST00000558847 FAM35AQ86V20 835 aa7.42□□□□□ -1.22
CASC4-206ENST00000558847 FOXD4L4Q8WXT5 416 aaPredicted RBP7.42□□□□□ -1.22
CASC4-206ENST00000558847 BCL11AQ9H165 835 aa7.42□□□□□ -1.22
CASC4-206ENST00000558847 XYLBO75191 536 aa7.41□□□□□ -1.22
CASC4-206ENST00000558847 MAP3K6O95382 1288 aa7.41□□□□□ -1.22
CASC4-206ENST00000558847 CPB1P15086 417 aa7.41□□□□□ -1.22
CASC4-206ENST00000558847 AFF1P51825 1210 aaKnown RBP7.41□□□□□ -1.22
CASC4-206ENST00000558847 ADGRE1Q14246 886 aa7.41□□□□□ -1.22
CASC4-206ENST00000558847 NOM1Q5C9Z4 860 aaKnown RBP7.41□□□□□ -1.22
CASC4-206ENST00000558847 TXNRD3Q86VQ6 643 aa7.41□□□□□ -1.22
CASC4-206ENST00000558847 ZSCAN29Q8IWY8 852 aaPredicted RBP7.41□□□□□ -1.22
CASC4-206ENST00000558847 CMTR1Q8N1G2 835 aaKnown RBP7.41□□□□□ -1.22
CASC4-206ENST00000558847 GPR152Q8TDT2 470 aa7.41□□□□□ -1.22
CASC4-206ENST00000558847 FZD6O60353 706 aa7.4□□□□□ -1.22
CASC4-206ENST00000558847 RBM25P49756 843 aaKnown RBP7.4□□□□□ -1.22
CASC4-206ENST00000558847 PCSK7Q16549 785 aa7.4□□□□□ -1.22
CASC4-206ENST00000558847 ALKBH2Q6NS38 261 aa7.4□□□□□ -1.22
CASC4-206ENST00000558847 PIK3R5Q8WYR1 880 aa7.4□□□□□ -1.22
CASC4-206ENST00000558847 EDEM1Q92611 657 aa7.4□□□□□ -1.22
CASC4-206ENST00000558847 LENG1Q96BZ8 264 aaPredicted RBP7.4□□□□□ -1.22
CASC4-206ENST00000558847 FAM13BQ9NYF5 915 aa7.4□□□□□ -1.22
CASC4-206ENST00000558847 DCTN4Q9UJW0 460 aa7.4□□□□□ -1.22
CASC4-206ENST00000558847 NAGPAQ9UK23 515 aa7.4□□□□□ -1.22
CASC4-206ENST00000558847 E9PSI1 815 aa7.39□□□□□ -1.23
CASC4-206ENST00000558847 SASH3O75995 380 aa7.39□□□□□ -1.23
CASC4-206ENST00000558847 PDGFAP04085 211 aa7.39□□□□□ -1.23
CASC4-206ENST00000558847 ARHGAP4P98171 946 aa7.39□□□□□ -1.23
CASC4-206ENST00000558847 FOXD4L6Q3SYB3 417 aaPredicted RBP7.39□□□□□ -1.23
CASC4-206ENST00000558847 ELMSAN1Q6PJG2 1045 aa7.39□□□□□ -1.23
CASC4-206ENST00000558847 FOXD4L3Q6VB84 417 aaPredicted RBP7.39□□□□□ -1.23
CASC4-206ENST00000558847 DNAJC14Q6Y2X3 702 aaPredicted RBP7.39□□□□□ -1.23
CASC4-206ENST00000558847 NBPF11Q86T75 865 aa7.39□□□□□ -1.23
CASC4-206ENST00000558847 FMR1NBQ8N0W7 255 aaPredicted RBP7.39□□□□□ -1.23
CASC4-206ENST00000558847 TP53INP1Q96A56 240 aa7.39□□□□□ -1.23
CASC4-206ENST00000558847 NUDT16Q96DE0 195 aaKnown RBP7.39□□□□□ -1.23
CASC4-206ENST00000558847 ZFP64Q9NPA5 681 aa7.39□□□□□ -1.23
CASC4-206ENST00000558847 RBM47A0AV96 593 aaKnown RBP7.38□□□□□ -1.23
CASC4-206ENST00000558847 RARAP10276 462 aa7.38□□□□□ -1.23
CASC4-206ENST00000558847 TARSP26639 723 aaKnown RBP7.38□□□□□ -1.23
CASC4-206ENST00000558847 MZF1P28698 734 aaPredicted RBP7.38□□□□□ -1.23
CASC4-206ENST00000558847 MLLT1Q03111 559 aaPredicted RBP7.38□□□□□ -1.23
CASC4-206ENST00000558847 PSMG3-AS1Q96PY0 264 aa7.38□□□□□ -1.23
CASC4-206ENST00000558847 UBAP1LF5GYI3 381 aa7.37□□□□□ -1.23
CASC4-206ENST00000558847 NDUFB5O43674 189 aa7.37□□□□□ -1.23
CASC4-206ENST00000558847 H2AFB1P0C5Y9 115 aa7.37□□□□□ -1.23
CASC4-206ENST00000558847 H2AFB2P0C5Z0 115 aa7.37□□□□□ -1.23
CASC4-206ENST00000558847 HOXD8P13378 290 aaPredicted RBP7.37□□□□□ -1.23
CASC4-206ENST00000558847 MAPK1P28482 360 aa7.37□□□□□ -1.23
CASC4-206ENST00000558847 DNM1Q05193 864 aaKnown RBP7.37□□□□□ -1.23
CASC4-206ENST00000558847 COL19A1Q14993 1142 aa7.37□□□□□ -1.23
CASC4-206ENST00000558847 MSL1Q68DK7 614 aa7.37□□□□□ -1.23
CASC4-206ENST00000558847 DHX32Q7L7V1 743 aaKnown RBP7.37□□□□□ -1.23
CASC4-206ENST00000558847 WFDC8Q8IUA0 241 aa7.37□□□□□ -1.23
CASC4-206ENST00000558847 CITED4Q96RK1 184 aa7.37□□□□□ -1.23
CASC4-206ENST00000558847 POLIQ9UNA4 740 aa7.37□□□□□ -1.23
CASC4-206ENST00000558847 MMP20O60882 483 aa7.36□□□□□ -1.23
CASC4-206ENST00000558847 ARTNQ5T4W7 220 aa7.36□□□□□ -1.23
CASC4-206ENST00000558847 NLRP13Q86W25 1043 aa7.36□□□□□ -1.23
CASC4-206ENST00000558847 GJD3Q8N144 294 aa7.36□□□□□ -1.23
CASC4-206ENST00000558847 ASB16Q96NS5 453 aa7.36□□□□□ -1.23
CASC4-206ENST00000558847 CCDC87Q9NVE4 849 aa7.36□□□□□ -1.23
CASC4-206ENST00000558847 GPLD1P80108 840 aa7.35□□□□□ -1.23
CASC4-206ENST00000558847 PERM1Q5SV97 790 aa7.35□□□□□ -1.23
CASC4-206ENST00000558847 PDE12Q6L8Q7 609 aaKnown RBP7.35□□□□□ -1.23
CASC4-206ENST00000558847 HFE2Q6ZVN8 426 aa7.35□□□□□ -1.23
CASC4-206ENST00000558847 TRPM4Q8TD43 1214 aa7.35□□□□□ -1.23
CASC4-206ENST00000558847 LPIN3Q9BQK8 851 aa7.35□□□□□ -1.23
CASC4-206ENST00000558847 GGNBP2Q9H3C7 697 aa7.35□□□□□ -1.23
CASC4-206ENST00000558847 TLR7Q9NYK1 1049 aaKnown RBP7.35□□□□□ -1.23
CASC4-206ENST00000558847 ANKRD33BA6NCL7 494 aa7.34□□□□□ -1.23
CASC4-206ENST00000558847 A6NHS1 94 aa7.34□□□□□ -1.23
CASC4-206ENST00000558847 ZBTB42B2RXF5 422 aa7.34□□□□□ -1.23
CASC4-206ENST00000558847 SOX18P35713 384 aa7.34□□□□□ -1.23
CASC4-206ENST00000558847 NRLP54845 237 aa7.34□□□□□ -1.23
CASC4-206ENST00000558847 FGD1P98174 961 aa7.34□□□□□ -1.23
CASC4-206ENST00000558847 ZNF326Q5BKZ1 582 aaKnown RBP7.34□□□□□ -1.23
CASC4-206ENST00000558847 DTWD1Q8N5C7 304 aa7.34□□□□□ -1.23
CASC4-206ENST00000558847 BCL2L13Q9BXK5 485 aa7.34□□□□□ -1.23
CASC4-206ENST00000558847 KRTAP4-8Q9BYQ9 185 aa7.34□□□□□ -1.23
CASC4-206ENST00000558847 FRRS1LQ9P0K9 344 aa7.34□□□□□ -1.23
CASC4-206ENST00000558847 TMEM63CQ9P1W3 806 aa7.34□□□□□ -1.23
CASC4-206ENST00000558847 BRPF3Q9ULD4 1205 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms