RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 POLRMTO00411 1230 aaKnown RBP15.75■□□□□ 0.11
SMAD3-207ENST00000558763 HCLS1P14317 486 aaPredicted RBP15.75■□□□□ 0.11
SMAD3-207ENST00000558763 IL15P40933 162 aaPredicted RBP15.75■□□□□ 0.11
SMAD3-207ENST00000558763 IL17RAQ96F46 866 aa15.75■□□□□ 0.11
SMAD3-207ENST00000558763 GPR108Q9NPR9 543 aa15.75■□□□□ 0.11
SMAD3-207ENST00000558763 SERPINB2P05120 415 aa15.75■□□□□ 0.11
SMAD3-207ENST00000558763 TPTE2Q6XPS3 522 aa15.75■□□□□ 0.11
SMAD3-207ENST00000558763 CNBD1Q8NA66 436 aa15.75■□□□□ 0.11
SMAD3-207ENST00000558763 TTLL11Q8NHH1 800 aa15.75■□□□□ 0.11
SMAD3-207ENST00000558763 DBNDD2Q9BQY9 259 aa15.75■□□□□ 0.11
SMAD3-207ENST00000558763 ZBTB7AO95365 584 aa15.74■□□□□ 0.11
SMAD3-207ENST00000558763 ATP5JP18859 108 aa15.74■□□□□ 0.11
SMAD3-207ENST00000558763 CTSWP56202 376 aa15.74■□□□□ 0.11
SMAD3-207ENST00000558763 EVI5LQ96CN4 794 aa15.74■□□□□ 0.11
SMAD3-207ENST00000558763 CCDC85AQ96PX6 553 aaPredicted RBP15.74■□□□□ 0.11
SMAD3-207ENST00000558763 EPB41L2O43491 1005 aaKnown RBP15.73■□□□□ 0.11
SMAD3-207ENST00000558763 RABEP1Q15276 862 aa15.73■□□□□ 0.11
SMAD3-207ENST00000558763 PRR5LQ6MZQ0 368 aa15.73■□□□□ 0.11
SMAD3-207ENST00000558763 FBXO3Q9UK99 471 aa15.73■□□□□ 0.11
SMAD3-207ENST00000558763 PALD1Q9ULE6 856 aa15.73■□□□□ 0.11
SMAD3-207ENST00000558763 HSCBQ8IWL3 235 aa15.73■□□□□ 0.11
SMAD3-207ENST00000558763 BOLA2Q9H3K6 86 aa15.73■□□□□ 0.11
SMAD3-207ENST00000558763 GREM2Q9H772 168 aa15.73■□□□□ 0.11
SMAD3-207ENST00000558763 PARP3Q9Y6F1 533 aa15.73■□□□□ 0.11
SMAD3-207ENST00000558763 TNRC6CQ9HCJ0 1690 aaKnown RBP15.72■□□□□ 0.11
SMAD3-207ENST00000558763 RAD50Q92878 1312 aa15.72■□□□□ 0.11
SMAD3-207ENST00000558763 PDE8AO60658 829 aa15.72■□□□□ 0.11
SMAD3-207ENST00000558763 CCDC57Q2TAC2 916 aa15.72■□□□□ 0.11
SMAD3-207ENST00000558763 SLC16A10Q8TF71 515 aa15.72■□□□□ 0.11
SMAD3-207ENST00000558763 LSG1Q9H089 658 aaKnown RBP15.72■□□□□ 0.11
SMAD3-207ENST00000558763 ANO2Q9NQ90 1003 aa15.72■□□□□ 0.11
SMAD3-207ENST00000558763 DDIT3P35638 169 aa15.71■□□□□ 0.11
SMAD3-207ENST00000558763 SLKQ9H2G2 1235 aaPredicted RBP15.71■□□□□ 0.11
SMAD3-207ENST00000558763 COL4A1P02462 1669 aa15.71■□□□□ 0.11
SMAD3-207ENST00000558763 NRXN2Q9P2S2 1712 aa15.71■□□□□ 0.11
SMAD3-207ENST00000558763 ST5P78524 1137 aa15.71■□□□□ 0.1
SMAD3-207ENST00000558763 C3orf67Q6ZVT6 689 aa15.71■□□□□ 0.1
SMAD3-207ENST00000558763 EDC3Q96F86 508 aaKnown RBP15.71■□□□□ 0.1
SMAD3-207ENST00000558763 SNRKQ9NRH2 765 aa15.71■□□□□ 0.1
SMAD3-207ENST00000558763 SPEF2Q9C093 1822 aa15.7■□□□□ 0.1
SMAD3-207ENST00000558763 ITGA6P23229 1130 aa15.7■□□□□ 0.1
SMAD3-207ENST00000558763 IFIT5Q13325 482 aaKnown RBP15.7■□□□□ 0.1
SMAD3-207ENST00000558763 CWC27Q6UX04 472 aaKnown RBP15.7■□□□□ 0.1
SMAD3-207ENST00000558763 ATF5Q9Y2D1 282 aaPredicted RBP15.7■□□□□ 0.1
SMAD3-207ENST00000558763 RIPOR2Q9Y4F9 1068 aa15.7■□□□□ 0.1
SMAD3-207ENST00000558763 TIMM10P62072 90 aa15.69■□□□□ 0.1
SMAD3-207ENST00000558763 ARAP2Q8WZ64 1704 aa15.69■□□□□ 0.1
SMAD3-207ENST00000558763 RFX7Q2KHR2 1363 aa15.69■□□□□ 0.1
SMAD3-207ENST00000558763 MED23Q9ULK4 1368 aa15.69■□□□□ 0.1
SMAD3-207ENST00000558763 A0A1B0GUL7 405 aa15.69■□□□□ 0.1
SMAD3-207ENST00000558763 K7ELQ4 463 aaPredicted RBP15.69■□□□□ 0.1
SMAD3-207ENST00000558763 HSP90B1P14625 803 aaKnown RBP15.69■□□□□ 0.1
SMAD3-207ENST00000558763 HSPA4P34932 840 aa15.69■□□□□ 0.1
SMAD3-207ENST00000558763 ANAPC15P60006 121 aa15.69■□□□□ 0.1
SMAD3-207ENST00000558763 VGLL2Q8N8G2 317 aa15.69■□□□□ 0.1
SMAD3-207ENST00000558763 HAUS7Q99871 368 aa15.69■□□□□ 0.1
SMAD3-207ENST00000558763 MTFR1LQ9H019 292 aa15.69■□□□□ 0.1
SMAD3-207ENST00000558763 NDUFB9Q9Y6M9 179 aa15.69■□□□□ 0.1
SMAD3-207ENST00000558763 AKAP11Q9UKA4 1901 aa15.68■□□□□ 0.1
SMAD3-207ENST00000558763 NBR1Q14596 966 aa15.68■□□□□ 0.1
SMAD3-207ENST00000558763 SLC10A5Q5PT55 438 aa15.68■□□□□ 0.1
SMAD3-207ENST00000558763 FAM227BQ96M60 508 aa15.68■□□□□ 0.1
SMAD3-207ENST00000558763 DIAPH3Q9NSV4 1193 aa15.68■□□□□ 0.1
SMAD3-207ENST00000558763 A0A0D9SFI3 127 aa15.67■□□□□ 0.1
SMAD3-207ENST00000558763 NMIQ13287 307 aaPredicted RBP15.67■□□□□ 0.1
SMAD3-207ENST00000558763 NLRP3Q96P20 1036 aa15.67■□□□□ 0.1
SMAD3-207ENST00000558763 A0A1B0GUL6 1792 aa15.67■□□□□ 0.1
SMAD3-207ENST00000558763 ANKRD31Q8N7Z5 1873 aa15.67■□□□□ 0.1
SMAD3-207ENST00000558763 SRCAPQ6ZRS2 3230 aa15.67■□□□□ 0.1
SMAD3-207ENST00000558763 SPRYD3Q8NCJ5 442 aa15.67■□□□□ 0.1
SMAD3-207ENST00000558763 RTL9Q8NET4 1388 aa15.67■□□□□ 0.1
SMAD3-207ENST00000558763 ANKRD18BA2A2Z9 1011 aa15.66■□□□□ 0.1
SMAD3-207ENST00000558763 PTH1RQ03431 593 aa15.66■□□□□ 0.1
SMAD3-207ENST00000558763 CCDC152Q4G0S7 254 aa15.66■□□□□ 0.1
SMAD3-207ENST00000558763 FSD1Q9BTV5 496 aa15.66■□□□□ 0.1
SMAD3-207ENST00000558763 CEP126Q9P2H0 1117 aa15.66■□□□□ 0.1
SMAD3-207ENST00000558763 GOLGB1Q14789 3259 aaKnown RBP15.66■□□□□ 0.1
SMAD3-207ENST00000558763 CHGBP05060 677 aa15.66■□□□□ 0.1
SMAD3-207ENST00000558763 ADORA1P30542 326 aa15.66■□□□□ 0.1
SMAD3-207ENST00000558763 NEUROD6Q96NK8 337 aa15.66■□□□□ 0.1
SMAD3-207ENST00000558763 HIP1O00291 1037 aa15.65■□□□□ 0.1
SMAD3-207ENST00000558763 NFKBIBQ15653 356 aa15.65■□□□□ 0.1
SMAD3-207ENST00000558763 RUFY2Q8WXA3 655 aa15.65■□□□□ 0.1
SMAD3-207ENST00000558763 SEC31BQ9NQW1 1179 aa15.65■□□□□ 0.1
SMAD3-207ENST00000558763 MCCP23508 829 aa15.64■□□□□ 0.09
SMAD3-207ENST00000558763 POLD1P28340 1107 aa15.64■□□□□ 0.09
SMAD3-207ENST00000558763 SF3B3Q15393 1217 aaKnown RBP15.64■□□□□ 0.09
SMAD3-207ENST00000558763 TAF7LQ5H9L4 462 aa15.64■□□□□ 0.09
SMAD3-207ENST00000558763 LDHAL6AQ6ZMR3 332 aa15.64■□□□□ 0.09
SMAD3-207ENST00000558763 RASEFQ8IZ41 740 aa15.64■□□□□ 0.09
SMAD3-207ENST00000558763 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.64■□□□□ 0.09
SMAD3-207ENST00000558763 KCNB2Q92953 911 aa15.64■□□□□ 0.09
SMAD3-207ENST00000558763 CCDC171Q6TFL3 1326 aa15.64■□□□□ 0.09
SMAD3-207ENST00000558763 TAF1P21675 1872 aa15.64■□□□□ 0.09
SMAD3-207ENST00000558763 MYH7P12883 1935 aa15.64■□□□□ 0.09
SMAD3-207ENST00000558763 SOCS7O14512 581 aa15.64■□□□□ 0.09
SMAD3-207ENST00000558763 ZNF589Q86UQ0 364 aaPredicted RBP15.64■□□□□ 0.09
SMAD3-207ENST00000558763 XAGE2Q96GT9 111 aa15.64■□□□□ 0.09
SMAD3-207ENST00000558763 DNAJC2Q99543 621 aaKnown RBP15.64■□□□□ 0.09
SMAD3-207ENST00000558763 BRIP1Q9BX63 1249 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms