RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 SASH3O75995 380 aa11.52□□□□□ -0.57
TRPM1-207ENST00000558445 CCT2P78371 535 aaKnown RBP11.52□□□□□ -0.57
TRPM1-207ENST00000558445 ZKSCAN4Q969J2 545 aaPredicted RBP11.52□□□□□ -0.57
TRPM1-207ENST00000558445 NUP155O75694 1391 aa11.52□□□□□ -0.57
TRPM1-207ENST00000558445 TPP2P29144 1249 aaPredicted RBP11.52□□□□□ -0.57
TRPM1-207ENST00000558445 MRPL12P52815 198 aaKnown RBP11.52□□□□□ -0.57
TRPM1-207ENST00000558445 CASP8Q14790 479 aa11.52□□□□□ -0.57
TRPM1-207ENST00000558445 SARM1Q6SZW1 724 aa11.52□□□□□ -0.57
TRPM1-207ENST00000558445 MYLK4Q86YV6 388 aaPredicted RBP11.52□□□□□ -0.57
TRPM1-207ENST00000558445 CAGE1Q8TC20 777 aa11.52□□□□□ -0.57
TRPM1-207ENST00000558445 ZNF483Q8TF39 744 aaPredicted RBP11.52□□□□□ -0.57
TRPM1-207ENST00000558445 RBM33Q96EV2 1170 aaKnown RBP11.52□□□□□ -0.57
TRPM1-207ENST00000558445 PCF11O94913 1555 aaKnown RBP11.52□□□□□ -0.57
TRPM1-207ENST00000558445 AP5Z1O43299 807 aa11.52□□□□□ -0.57
TRPM1-207ENST00000558445 SDSP20132 328 aa11.52□□□□□ -0.57
TRPM1-207ENST00000558445 STIM1Q13586 685 aa11.52□□□□□ -0.57
TRPM1-207ENST00000558445 CFAP100Q494V2 611 aa11.52□□□□□ -0.57
TRPM1-207ENST00000558445 B4GALNT2Q8NHY0 566 aa11.52□□□□□ -0.57
TRPM1-207ENST00000558445 ATRIPQ8WXE1 791 aa11.52□□□□□ -0.57
TRPM1-207ENST00000558445 DTNBP1Q96EV8 351 aa11.52□□□□□ -0.57
TRPM1-207ENST00000558445 AKAP2Q9Y2D5 859 aa11.52□□□□□ -0.57
TRPM1-207ENST00000558445 ARID3CA6NKF2 412 aa11.51□□□□□ -0.57
TRPM1-207ENST00000558445 CREB3O43889 395 aa11.51□□□□□ -0.57
TRPM1-207ENST00000558445 TMEM132AQ24JP5 1023 aa11.51□□□□□ -0.57
TRPM1-207ENST00000558445 FERMT3Q86UX7 667 aa11.51□□□□□ -0.57
TRPM1-207ENST00000558445 AMOTL1Q8IY63 956 aa11.51□□□□□ -0.57
TRPM1-207ENST00000558445 AOPEPQ8N6M6 819 aa11.51□□□□□ -0.57
TRPM1-207ENST00000558445 TSR2Q969E8 191 aaKnown RBP11.51□□□□□ -0.57
TRPM1-207ENST00000558445 CFAP45Q9UL16 551 aa11.51□□□□□ -0.57
TRPM1-207ENST00000558445 PIK3C2GO75747 1445 aa11.51□□□□□ -0.57
TRPM1-207ENST00000558445 KIF14Q15058 1648 aa11.51□□□□□ -0.57
TRPM1-207ENST00000558445 ARID5BQ14865 1188 aa11.51□□□□□ -0.57
TRPM1-207ENST00000558445 ACBD5Q5T8D3 534 aaPredicted RBP11.51□□□□□ -0.57
TRPM1-207ENST00000558445 ANKRD23Q86SG2 305 aa11.51□□□□□ -0.57
TRPM1-207ENST00000558445 TRIM58Q8NG06 486 aa11.51□□□□□ -0.57
TRPM1-207ENST00000558445 SPAG5Q96R06 1193 aa11.51□□□□□ -0.57
TRPM1-207ENST00000558445 ACTR5Q9H9F9 607 aaPredicted RBP11.51□□□□□ -0.57
TRPM1-207ENST00000558445 ZNHIT6Q9NWK9 470 aaKnown RBP11.51□□□□□ -0.57
TRPM1-207ENST00000558445 AK9Q5TCS8 1911 aa11.51□□□□□ -0.57
TRPM1-207ENST00000558445 TSGA10IPQ3SY00 556 aa11.51□□□□□ -0.57
TRPM1-207ENST00000558445 PARD3BQ8TEW8 1205 aa11.51□□□□□ -0.57
TRPM1-207ENST00000558445 ARMC9Q7Z3E5 817 aa11.5□□□□□ -0.57
TRPM1-207ENST00000558445 BAIAP2L1Q9UHR4 511 aa11.5□□□□□ -0.57
TRPM1-207ENST00000558445 ZEB2O60315 1214 aa11.5□□□□□ -0.57
TRPM1-207ENST00000558445 GJB2P29033 226 aa11.5□□□□□ -0.57
TRPM1-207ENST00000558445 MAGEA8P43361 318 aa11.5□□□□□ -0.57
TRPM1-207ENST00000558445 IQCEQ6IPM2 695 aa11.5□□□□□ -0.57
TRPM1-207ENST00000558445 DMRT2Q9Y5R5 561 aa11.5□□□□□ -0.57
TRPM1-207ENST00000558445 CFAP43Q8NDM7 1665 aa11.5□□□□□ -0.57
TRPM1-207ENST00000558445 PSME1Q06323 249 aa11.5□□□□□ -0.57
TRPM1-207ENST00000558445 TBC1D8BQ0IIM8 1120 aa11.5□□□□□ -0.57
TRPM1-207ENST00000558445 CCDC57Q2TAC2 916 aa11.5□□□□□ -0.57
TRPM1-207ENST00000558445 SAMM50Q9Y512 469 aa11.5□□□□□ -0.57
TRPM1-207ENST00000558445 LRRD1A4D1F6 860 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 SEPT14Q6ZU15 432 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 SRGAP1Q7Z6B7 1085 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 HOOK2Q96ED9 719 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 ATP6V0A4Q9HBG4 840 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 SH2B1Q9NRF2 756 aaPredicted RBP11.49□□□□□ -0.57
TRPM1-207ENST00000558445 CFTRP13569 1480 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 FAM135AQ9P2D6 1515 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 KDM5CP41229 1560 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 BCORL1Q5H9F3 1711 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 MYO1FO00160 1098 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 SKAP2O75563 359 aaPredicted RBP11.49□□□□□ -0.57
TRPM1-207ENST00000558445 KCNJ6P48051 423 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 CCZ1BP86790 482 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 CCZ1P86791 482 aaPredicted RBP11.49□□□□□ -0.57
TRPM1-207ENST00000558445 SDCCAG8Q86SQ7 713 aaPredicted RBP11.49□□□□□ -0.57
TRPM1-207ENST00000558445 PLEKHM2Q8IWE5 1019 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 CCDC83Q8IWF9 413 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 PARP9Q8IXQ6 854 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 RGL1Q9NZL6 768 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 PPP1R12BO60237 982 aaPredicted RBP11.49□□□□□ -0.57
TRPM1-207ENST00000558445 MXRA7P84157 204 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 CUL3Q13618 768 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 SPECC1Q5M775 1068 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 LMNTD2Q8IXW0 634 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 FUCA2Q9BTY2 467 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 EPC1Q9H2F5 836 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 HYPKQ9NX55 129 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 IFNKQ9P0W0 207 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 MEFVO15553 781 aaPredicted RBP11.49□□□□□ -0.57
TRPM1-207ENST00000558445 PPFIA3O75145 1194 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 COQ9O75208 318 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 DESP17661 470 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 FCHSD1Q86WN1 690 aa11.49□□□□□ -0.57
TRPM1-207ENST00000558445 NBPF7P0C2Y1 421 aaPredicted RBP11.48□□□□□ -0.57
TRPM1-207ENST00000558445 ZKSCAN1P17029 563 aaPredicted RBP11.48□□□□□ -0.57
TRPM1-207ENST00000558445 HDGFL1Q5TGJ6 251 aa11.48□□□□□ -0.57
TRPM1-207ENST00000558445 MFN1Q8IWA4 741 aa11.48□□□□□ -0.57
TRPM1-207ENST00000558445 HNRNPLLQ8WVV9 542 aaKnown RBP11.48□□□□□ -0.57
TRPM1-207ENST00000558445 ABCB6Q9NP58 842 aa11.48□□□□□ -0.57
TRPM1-207ENST00000558445 ARHGAP6O43182 974 aa11.48□□□□□ -0.57
TRPM1-207ENST00000558445 TSPY4P0CV99 314 aa11.48□□□□□ -0.57
TRPM1-207ENST00000558445 TSPY10P0CW01 314 aa11.48□□□□□ -0.57
TRPM1-207ENST00000558445 DYNC1I2Q13409 638 aaKnown RBP11.48□□□□□ -0.57
TRPM1-207ENST00000558445 HSP90AB2PQ58FF8 381 aa11.48□□□□□ -0.57
TRPM1-207ENST00000558445 TRIM42Q8IWZ5 723 aa11.48□□□□□ -0.57
TRPM1-207ENST00000558445 CTAGE9A4FU28 777 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms