RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 RARSP54136 660 aaKnown RBP12.97□□□□□ -0.33
TPM1-212ENST00000558347 WASHC4Q2M389 1173 aa12.97□□□□□ -0.33
TPM1-212ENST00000558347 UBE3BQ7Z3V4 1068 aa12.97□□□□□ -0.33
TPM1-212ENST00000558347 TTLL11Q8NHH1 800 aa12.97□□□□□ -0.33
TPM1-212ENST00000558347 NOP58Q9Y2X3 529 aaKnown RBP12.97□□□□□ -0.33
TPM1-212ENST00000558347 F6X3S4 739 aa12.96□□□□□ -0.33
TPM1-212ENST00000558347 C6orf229H3BNL8 230 aa12.96□□□□□ -0.33
TPM1-212ENST00000558347 RIMBP2O15034 1052 aa12.96□□□□□ -0.33
TPM1-212ENST00000558347 RAD17O75943 681 aa12.96□□□□□ -0.33
TPM1-212ENST00000558347 LMOD1P29536 600 aaPredicted RBP12.96□□□□□ -0.33
TPM1-212ENST00000558347 CASP7P55210 303 aa12.96□□□□□ -0.33
TPM1-212ENST00000558347 PNMA8AQ86V59 439 aaPredicted RBP12.96□□□□□ -0.33
TPM1-212ENST00000558347 LINS1Q8NG48 757 aa12.96□□□□□ -0.33
TPM1-212ENST00000558347 TBC1D16Q8TBP0 767 aa12.96□□□□□ -0.33
TPM1-212ENST00000558347 KLRG1Q96E93 195 aa12.96□□□□□ -0.33
TPM1-212ENST00000558347 GREM2Q9H772 168 aa12.96□□□□□ -0.33
TPM1-212ENST00000558347 CLEC11AQ9Y240 323 aa12.96□□□□□ -0.33
TPM1-212ENST00000558347 PASKQ96RG2 1323 aa12.95□□□□□ -0.34
TPM1-212ENST00000558347 ITGBL1O95965 494 aaPredicted RBP12.95□□□□□ -0.34
TPM1-212ENST00000558347 ALDH1L2Q3SY69 923 aa12.95□□□□□ -0.34
TPM1-212ENST00000558347 MAP1SQ66K74 1059 aaPredicted RBP12.95□□□□□ -0.34
TPM1-212ENST00000558347 CIAPIN1Q6FI81 312 aa12.95□□□□□ -0.34
TPM1-212ENST00000558347 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.95□□□□□ -0.34
TPM1-212ENST00000558347 DBNDD1Q9H9R9 158 aa12.95□□□□□ -0.34
TPM1-212ENST00000558347 PODXL2Q9NZ53 605 aa12.95□□□□□ -0.34
TPM1-212ENST00000558347 GMPSP49915 693 aaPredicted RBP12.94□□□□□ -0.34
TPM1-212ENST00000558347 BRPF1P55201 1214 aaPredicted RBP12.94□□□□□ -0.34
TPM1-212ENST00000558347 BEND3Q5T5X7 828 aa12.94□□□□□ -0.34
TPM1-212ENST00000558347 ANKRD18AQ8IVF6 992 aa12.94□□□□□ -0.34
TPM1-212ENST00000558347 IPO9Q96P70 1041 aaKnown RBP12.94□□□□□ -0.34
TPM1-212ENST00000558347 GPRC5DQ9NZD1 345 aa12.94□□□□□ -0.34
TPM1-212ENST00000558347 ANKIB1Q9P2G1 1089 aa12.94□□□□□ -0.34
TPM1-212ENST00000558347 RTL9Q8NET4 1388 aa12.94□□□□□ -0.34
TPM1-212ENST00000558347 UFL1O94874 794 aa12.93□□□□□ -0.34
TPM1-212ENST00000558347 DOK7Q18PE1 504 aa12.93□□□□□ -0.34
TPM1-212ENST00000558347 CDC5LQ99459 802 aaKnown RBP12.93□□□□□ -0.34
TPM1-212ENST00000558347 EYA3Q99504 573 aa12.93□□□□□ -0.34
TPM1-212ENST00000558347 PLA2G12BQ9BX93 195 aa12.93□□□□□ -0.34
TPM1-212ENST00000558347 KCNQ5Q9NR82 932 aa12.93□□□□□ -0.34
TPM1-212ENST00000558347 SCN9AQ15858 1988 aa12.93□□□□□ -0.34
TPM1-212ENST00000558347 ECE2O60344 883 aa12.93□□□□□ -0.34
TPM1-212ENST00000558347 BCAR3O75815 825 aa12.93□□□□□ -0.34
TPM1-212ENST00000558347 TNIP1Q15025 636 aa12.93□□□□□ -0.34
TPM1-212ENST00000558347 USP50Q70EL3 339 aaPredicted RBP12.93□□□□□ -0.34
TPM1-212ENST00000558347 CNTROBQ8N137 903 aa12.93□□□□□ -0.34
TPM1-212ENST00000558347 GGA1Q9UJY5 639 aa12.93□□□□□ -0.34
TPM1-212ENST00000558347 XDHP47989 1333 aa12.92□□□□□ -0.34
TPM1-212ENST00000558347 SHTN1A0MZ66 631 aa12.92□□□□□ -0.34
TPM1-212ENST00000558347 WTIPA6NIX2 430 aaPredicted RBP12.92□□□□□ -0.34
TPM1-212ENST00000558347 PSMD14O00487 310 aa12.92□□□□□ -0.34
TPM1-212ENST00000558347 CSF1RP07333 972 aa12.92□□□□□ -0.34
TPM1-212ENST00000558347 FAM161AQ3B820 660 aa12.92□□□□□ -0.34
TPM1-212ENST00000558347 JMYQ8N9B5 988 aa12.92□□□□□ -0.34
TPM1-212ENST00000558347 SSH1Q8WYL5 1049 aa12.92□□□□□ -0.34
TPM1-212ENST00000558347 CRBNQ96SW2 442 aa12.92□□□□□ -0.34
TPM1-212ENST00000558347 CREBZFQ9NS37 354 aa12.92□□□□□ -0.34
TPM1-212ENST00000558347 ADARB2Q9NS39 739 aaKnown RBP12.92□□□□□ -0.34
TPM1-212ENST00000558347 BSDC1Q9NW68 430 aaPredicted RBP12.92□□□□□ -0.34
TPM1-212ENST00000558347 ZBTB12Q9Y330 459 aaPredicted RBP12.92□□□□□ -0.34
TPM1-212ENST00000558347 ITGA6P23229 1130 aa12.91□□□□□ -0.34
TPM1-212ENST00000558347 MRPL50Q8N5N7 158 aaKnown RBP12.91□□□□□ -0.34
TPM1-212ENST00000558347 BCL2L13Q9BXK5 485 aa12.91□□□□□ -0.34
TPM1-212ENST00000558347 ZC3H12CQ9C0D7 883 aaKnown RBP12.91□□□□□ -0.34
TPM1-212ENST00000558347 MINPP1Q9UNW1 487 aa12.91□□□□□ -0.34
TPM1-212ENST00000558347 FOXO4P98177 505 aa12.9□□□□□ -0.34
TPM1-212ENST00000558347 FMR1Q06787 632 aaKnown RBP eCLIP12.9□□□□□ -0.34
TPM1-212ENST00000558347 SLC4A10Q6U841 1118 aa12.9□□□□□ -0.34
TPM1-212ENST00000558347 SMC4Q9NTJ3 1288 aa12.9□□□□□ -0.34
TPM1-212ENST00000558347 ATP2B4P23634 1241 aa12.89□□□□□ -0.35
TPM1-212ENST00000558347 IGHMBP2P38935 993 aaKnown RBP12.89□□□□□ -0.35
TPM1-212ENST00000558347 HIRAP54198 1017 aaPredicted RBP12.89□□□□□ -0.35
TPM1-212ENST00000558347 MICALL2Q8IY33 904 aa12.89□□□□□ -0.35
TPM1-212ENST00000558347 TRPM4Q8TD43 1214 aa12.89□□□□□ -0.35
TPM1-212ENST00000558347 BACH2Q9BYV9 841 aa12.89□□□□□ -0.35
TPM1-212ENST00000558347 CNOT7Q9UIV1 285 aaKnown RBP12.89□□□□□ -0.35
TPM1-212ENST00000558347 PSME4Q14997 1843 aa12.89□□□□□ -0.35
TPM1-212ENST00000558347 KIF16BQ96L93 1317 aa12.89□□□□□ -0.35
TPM1-212ENST00000558347 TMEM88BA6NKF7 163 aa12.88□□□□□ -0.35
TPM1-212ENST00000558347 GRM8O00222 908 aa12.88□□□□□ -0.35
TPM1-212ENST00000558347 PLIN1O60240 522 aa12.88□□□□□ -0.35
TPM1-212ENST00000558347 PDE3AQ14432 1141 aa12.88□□□□□ -0.35
TPM1-212ENST00000558347 EPHA10Q5JZY3 1008 aa12.88□□□□□ -0.35
TPM1-212ENST00000558347 CENPQQ7L2Z9 268 aaPredicted RBP12.88□□□□□ -0.35
TPM1-212ENST00000558347 MKRN1Q9UHC7 482 aaKnown RBP12.88□□□□□ -0.35
TPM1-212ENST00000558347 A0A1B0GUL6 1792 aa12.88□□□□□ -0.35
TPM1-212ENST00000558347 ALDH1L1O75891 902 aa12.88□□□□□ -0.35
TPM1-212ENST00000558347 EGFRP00533 1210 aa12.88□□□□□ -0.35
TPM1-212ENST00000558347 PDE4AP27815 886 aa12.88□□□□□ -0.35
TPM1-212ENST00000558347 CCT4P50991 539 aaKnown RBP12.88□□□□□ -0.35
TPM1-212ENST00000558347 ARHGAP45Q92619 1136 aa12.88□□□□□ -0.35
TPM1-212ENST00000558347 DPF2Q92785 391 aa12.88□□□□□ -0.35
TPM1-212ENST00000558347 SRCIN1Q9C0H9 1055 aa12.88□□□□□ -0.35
TPM1-212ENST00000558347 CNTNAP1P78357 1384 aa12.87□□□□□ -0.35
TPM1-212ENST00000558347 MED23Q9ULK4 1368 aa12.87□□□□□ -0.35
TPM1-212ENST00000558347 ZNF646O15015 1829 aaPredicted RBP12.87□□□□□ -0.35
TPM1-212ENST00000558347 ANKRD18BA2A2Z9 1011 aa12.87□□□□□ -0.35
TPM1-212ENST00000558347 G3V3G9 751 aa12.87□□□□□ -0.35
TPM1-212ENST00000558347 TRAF5O00463 557 aa12.87□□□□□ -0.35
TPM1-212ENST00000558347 IPO8O15397 1037 aaKnown RBP12.87□□□□□ -0.35
TPM1-212ENST00000558347 VIL1P09327 827 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms