RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 KIF2AO00139 706 aaPredicted RBP6.43□□□□□ -1.38
GABPB1-207ENST00000558335 GRM8O00222 908 aa6.43□□□□□ -1.38
GABPB1-207ENST00000558335 FOXO3O43524 673 aa6.43□□□□□ -1.38
GABPB1-207ENST00000558335 SETSIPP0DME0 302 aa6.43□□□□□ -1.38
GABPB1-207ENST00000558335 NOP2P46087 812 aaKnown RBP6.43□□□□□ -1.38
GABPB1-207ENST00000558335 AK2P54819 239 aa6.43□□□□□ -1.38
GABPB1-207ENST00000558335 CBX1P83916 185 aa6.43□□□□□ -1.38
GABPB1-207ENST00000558335 LRCH2Q5VUJ6 765 aa6.43□□□□□ -1.38
GABPB1-207ENST00000558335 LARP1BQ659C4 914 aaKnown RBP6.43□□□□□ -1.38
GABPB1-207ENST00000558335 RINLQ6ZS11 566 aa6.43□□□□□ -1.38
GABPB1-207ENST00000558335 TMTC2Q8N394 836 aa6.43□□□□□ -1.38
GABPB1-207ENST00000558335 RNF217Q8TC41 542 aa6.43□□□□□ -1.38
GABPB1-207ENST00000558335 FAM200AQ8TCP9 573 aa6.43□□□□□ -1.38
GABPB1-207ENST00000558335 MAP4K1Q92918 833 aa6.43□□□□□ -1.38
GABPB1-207ENST00000558335 JAKMIP1Q96N16 626 aaKnown RBP6.43□□□□□ -1.38
GABPB1-207ENST00000558335 NAT10Q9H0A0 1025 aaKnown RBP6.43□□□□□ -1.38
GABPB1-207ENST00000558335 NUP62CLQ9H1M0 184 aa6.43□□□□□ -1.38
GABPB1-207ENST00000558335 MIS18AQ9NYP9 233 aa6.43□□□□□ -1.38
GABPB1-207ENST00000558335 CWC15Q9P013 229 aaKnown RBP6.43□□□□□ -1.38
GABPB1-207ENST00000558335 SPG7Q9UQ90 795 aa6.43□□□□□ -1.38
GABPB1-207ENST00000558335 SETD1BQ9UPS6 1966 aaKnown RBP6.43□□□□□ -1.38
GABPB1-207ENST00000558335 HEG1Q9ULI3 1381 aa6.43□□□□□ -1.38
GABPB1-207ENST00000558335 MRC1P22897 1456 aa6.42□□□□□ -1.38
GABPB1-207ENST00000558335 RNMTO43148 476 aaKnown RBP6.42□□□□□ -1.38
GABPB1-207ENST00000558335 DHX16O60231 1041 aaKnown RBP6.42□□□□□ -1.38
GABPB1-207ENST00000558335 ERCC3P19447 782 aa6.42□□□□□ -1.38
GABPB1-207ENST00000558335 EIF2S2P20042 333 aaKnown RBP6.42□□□□□ -1.38
GABPB1-207ENST00000558335 GJB2P29033 226 aa6.42□□□□□ -1.38
GABPB1-207ENST00000558335 TPM4P67936 248 aa6.42□□□□□ -1.38
GABPB1-207ENST00000558335 SARNPP82979 210 aaKnown RBP6.42□□□□□ -1.38
GABPB1-207ENST00000558335 NECTIN1Q15223 517 aa6.42□□□□□ -1.38
GABPB1-207ENST00000558335 ZRSR1Q15695 479 aaKnown RBP6.42□□□□□ -1.38
GABPB1-207ENST00000558335 CWC27Q6UX04 472 aaKnown RBP6.42□□□□□ -1.38
GABPB1-207ENST00000558335 AACSQ86V21 672 aa6.42□□□□□ -1.38
GABPB1-207ENST00000558335 NUTM1Q86Y26 1132 aa6.42□□□□□ -1.38
GABPB1-207ENST00000558335 MSL3Q8N5Y2 521 aaKnown RBP6.42□□□□□ -1.38
GABPB1-207ENST00000558335 JMYQ8N9B5 988 aa6.42□□□□□ -1.38
GABPB1-207ENST00000558335 ZNF396Q96N95 335 aaPredicted RBP6.42□□□□□ -1.38
GABPB1-207ENST00000558335 FSD1Q9BTV5 496 aa6.42□□□□□ -1.38
GABPB1-207ENST00000558335 UPF3BQ9BZI7 483 aaKnown RBP6.42□□□□□ -1.38
GABPB1-207ENST00000558335 IL1RAPL2Q9NP60 686 aa6.42□□□□□ -1.38
GABPB1-207ENST00000558335 GPR108Q9NPR9 543 aa6.42□□□□□ -1.38
GABPB1-207ENST00000558335 CHPF2Q9P2E5 772 aa6.42□□□□□ -1.38
GABPB1-207ENST00000558335 PALD1Q9ULE6 856 aa6.42□□□□□ -1.38
GABPB1-207ENST00000558335 SCN11AQ9UI33 1791 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 HMGB1P1B2RPK0 211 aaPredicted RBP6.41□□□□□ -1.38
GABPB1-207ENST00000558335 MPHOSPH10O00566 681 aaKnown RBP6.41□□□□□ -1.38
GABPB1-207ENST00000558335 IRF6O14896 467 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 CCP110O43303 1012 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 ADCY5O95622 1261 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 ATP5JP18859 108 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 RPS6KB1P23443 525 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 CDC25BP30305 580 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 PKP1Q13835 747 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 NOLC1Q14978 699 aaKnown RBP eCLIP6.41□□□□□ -1.38
GABPB1-207ENST00000558335 CREB3L3Q68CJ9 461 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 NAA16Q6N069 864 aaPredicted RBP6.41□□□□□ -1.38
GABPB1-207ENST00000558335 RIC3Q7Z5B4 369 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 TBC1D22AQ8WUA7 517 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 SNRNP27Q8WVK2 155 aaKnown RBP6.41□□□□□ -1.38
GABPB1-207ENST00000558335 RAPGEF4Q8WZA2 1011 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 ERCC4Q92889 916 aaPredicted RBP6.41□□□□□ -1.38
GABPB1-207ENST00000558335 SPATA32Q96LK8 384 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 NOL10Q9BSC4 688 aaKnown RBP6.41□□□□□ -1.38
GABPB1-207ENST00000558335 TNMDQ9H2S6 317 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 COPRSQ9NQ92 184 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 SPTLC3Q9NUV7 552 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 RBM27Q9P2N5 1060 aaKnown RBP6.41□□□□□ -1.38
GABPB1-207ENST00000558335 CTNNA3Q9UI47 895 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 MTMR6Q9Y217 621 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 MAP3K2Q9Y2U5 619 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 ADCY9O60503 1353 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 JCADQ9P266 1359 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 LAMB4A4D0S4 1761 aa6.41□□□□□ -1.38
GABPB1-207ENST00000558335 PARP4Q9UKK3 1724 aaKnown RBP6.4□□□□□ -1.38
GABPB1-207ENST00000558335 NUTM2FA1L443 756 aa6.4□□□□□ -1.38
GABPB1-207ENST00000558335 VPS37CA5D8V6 355 aaPredicted RBP6.4□□□□□ -1.38
GABPB1-207ENST00000558335 C19orf67A6NJJ6 358 aa6.4□□□□□ -1.38
GABPB1-207ENST00000558335 GOLGA6L19H0YKK7 550 aa6.4□□□□□ -1.38
GABPB1-207ENST00000558335 H3BQV1 296 aa6.4□□□□□ -1.38
GABPB1-207ENST00000558335 MYO1BO43795 1136 aa6.4□□□□□ -1.38
GABPB1-207ENST00000558335 ZFYP08048 801 aaPredicted RBP6.4□□□□□ -1.38
GABPB1-207ENST00000558335 NBPF7P0C2Y1 421 aaPredicted RBP6.4□□□□□ -1.38
GABPB1-207ENST00000558335 SLFN14P0C7P3 912 aa6.4□□□□□ -1.38
GABPB1-207ENST00000558335 KCNA6P17658 529 aa6.4□□□□□ -1.38
GABPB1-207ENST00000558335 TATP17735 454 aaPredicted RBP6.4□□□□□ -1.38
GABPB1-207ENST00000558335 GSCP56915 257 aaPredicted RBP6.4□□□□□ -1.38
GABPB1-207ENST00000558335 TERF2Q15554 542 aa6.4□□□□□ -1.38
GABPB1-207ENST00000558335 ZRSR2Q15696 482 aaKnown RBP6.4□□□□□ -1.38
GABPB1-207ENST00000558335 MUM1L1Q5H9M0 696 aa6.4□□□□□ -1.38
GABPB1-207ENST00000558335 CT47A1Q5JQC4 288 aaPredicted RBP6.4□□□□□ -1.38
GABPB1-207ENST00000558335 IFFO2Q5TF58 517 aa6.4□□□□□ -1.38
GABPB1-207ENST00000558335 USPL1Q5W0Q7 1092 aa6.4□□□□□ -1.38
GABPB1-207ENST00000558335 PRPF40BQ6NWY9 871 aaKnown RBP6.4□□□□□ -1.38
GABPB1-207ENST00000558335 TTC5Q8N0Z6 440 aa6.4□□□□□ -1.38
GABPB1-207ENST00000558335 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.4□□□□□ -1.38
GABPB1-207ENST00000558335 TEX13AQ9BXU3 409 aaPredicted RBP6.4□□□□□ -1.38
GABPB1-207ENST00000558335 NUCKS1Q9H1E3 243 aaKnown RBP6.4□□□□□ -1.38
GABPB1-207ENST00000558335 PHAXQ9H814 394 aaKnown RBP6.4□□□□□ -1.38
GABPB1-207ENST00000558335 HELLSQ9NRZ9 838 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms