RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 RBM26Q5T8P6 1007 aaKnown RBP19.96■□□□□ 0.79
TPM1-211ENST00000558314 TBC1D16Q8TBP0 767 aa19.96■□□□□ 0.79
TPM1-211ENST00000558314 KCNQ5Q9NR82 932 aa19.96■□□□□ 0.79
TPM1-211ENST00000558314 CELF2O95319 508 aaKnown RBP19.95■□□□□ 0.78
TPM1-211ENST00000558314 KSR2Q6VAB6 950 aa19.95■□□□□ 0.78
TPM1-211ENST00000558314 ZC3H12CQ9C0D7 883 aaKnown RBP19.95■□□□□ 0.78
TPM1-211ENST00000558314 ZNF316A6NFI3 1004 aaPredicted RBP19.94■□□□□ 0.78
TPM1-211ENST00000558314 SLC4A2P04920 1241 aa19.94■□□□□ 0.78
TPM1-211ENST00000558314 HIRAP54198 1017 aaPredicted RBP19.94■□□□□ 0.78
TPM1-211ENST00000558314 TBC1D10BQ4KMP7 808 aaPredicted RBP19.94■□□□□ 0.78
TPM1-211ENST00000558314 CYP4F22Q6NT55 531 aa19.94■□□□□ 0.78
TPM1-211ENST00000558314 G2E3Q7L622 706 aa19.94■□□□□ 0.78
TPM1-211ENST00000558314 SAMD7Q7Z3H4 446 aa19.94■□□□□ 0.78
TPM1-211ENST00000558314 ANKRD18AQ8IVF6 992 aa19.94■□□□□ 0.78
TPM1-211ENST00000558314 GGA1Q9UJY5 639 aa19.94■□□□□ 0.78
TPM1-211ENST00000558314 CWF19L2Q2TBE0 894 aaKnown RBP19.93■□□□□ 0.78
TPM1-211ENST00000558314 CST9Q5W186 159 aa19.93■□□□□ 0.78
TPM1-211ENST00000558314 CAPNS2Q96L46 248 aa19.93■□□□□ 0.78
TPM1-211ENST00000558314 CDHR2Q9BYE9 1310 aa19.93■□□□□ 0.78
TPM1-211ENST00000558314 LRRC37AA6NMS7 1700 aa19.93■□□□□ 0.78
TPM1-211ENST00000558314 IGKV5-2P06315 115 aa19.92■□□□□ 0.78
TPM1-211ENST00000558314 CTCFP49711 727 aaPredicted RBP19.92■□□□□ 0.78
TPM1-211ENST00000558314 CCDC27Q2M243 656 aa19.92■□□□□ 0.78
TPM1-211ENST00000558314 USP48Q86UV5 1035 aa19.92■□□□□ 0.78
TPM1-211ENST00000558314 ECE1P42892 770 aa19.91■□□□□ 0.78
TPM1-211ENST00000558314 LBX1P52954 281 aa19.9■□□□□ 0.78
TPM1-211ENST00000558314 CTSWP56202 376 aa19.9■□□□□ 0.78
TPM1-211ENST00000558314 DLK2Q6UY11 383 aa19.9■□□□□ 0.78
TPM1-211ENST00000558314 WBP1LQ9NX94 342 aa19.9■□□□□ 0.78
TPM1-211ENST00000558314 TLL2Q9Y6L7 1015 aa19.9■□□□□ 0.78
TPM1-211ENST00000558314 RTL9Q8NET4 1388 aa19.9■□□□□ 0.78
TPM1-211ENST00000558314 MAP2K1Q02750 393 aaPredicted RBP19.89■□□□□ 0.77
TPM1-211ENST00000558314 FKBP5Q13451 457 aaPredicted RBP19.89■□□□□ 0.77
TPM1-211ENST00000558314 CDC37L1Q7L3B6 337 aa19.89■□□□□ 0.77
TPM1-211ENST00000558314 UBE3BQ7Z3V4 1068 aa19.89■□□□□ 0.77
TPM1-211ENST00000558314 FAM9BQ8IZU0 186 aa19.89■□□□□ 0.77
TPM1-211ENST00000558314 CDC5LQ99459 802 aaKnown RBP19.89■□□□□ 0.77
TPM1-211ENST00000558314 BEGAINQ9BUH8 593 aa19.89■□□□□ 0.77
TPM1-211ENST00000558314 FANCIQ9NVI1 1328 aa19.89■□□□□ 0.77
TPM1-211ENST00000558314 NEURL1BA8MQ27 555 aa19.88■□□□□ 0.77
TPM1-211ENST00000558314 AOC2O75106 756 aa19.88■□□□□ 0.77
TPM1-211ENST00000558314 EGFRP00533 1210 aa19.88■□□□□ 0.77
TPM1-211ENST00000558314 FLIIQ13045 1269 aa19.88■□□□□ 0.77
TPM1-211ENST00000558314 ZC3H15Q8WU90 426 aaKnown RBP19.88■□□□□ 0.77
TPM1-211ENST00000558314 DPF2Q92785 391 aa19.88■□□□□ 0.77
TPM1-211ENST00000558314 FBXW7Q969H0 707 aa19.88■□□□□ 0.77
TPM1-211ENST00000558314 GREM2Q9H772 168 aa19.88■□□□□ 0.77
TPM1-211ENST00000558314 PODXL2Q9NZ53 605 aa19.88■□□□□ 0.77
TPM1-211ENST00000558314 XDHP47989 1333 aa19.87■□□□□ 0.77
TPM1-211ENST00000558314 IL16Q14005 1332 aa19.87■□□□□ 0.77
TPM1-211ENST00000558314 ATP2B4P23634 1241 aa19.86■□□□□ 0.77
TPM1-211ENST00000558314 RPS12P25398 132 aaKnown RBP19.86■□□□□ 0.77
TPM1-211ENST00000558314 EXOSC9Q06265 439 aaKnown RBP19.86■□□□□ 0.77
TPM1-211ENST00000558314 KIF4BQ2VIQ3 1234 aa19.86■□□□□ 0.77
TPM1-211ENST00000558314 KRT26Q7Z3Y9 468 aa19.86■□□□□ 0.77
TPM1-211ENST00000558314 TTLL11Q8NHH1 800 aa19.86■□□□□ 0.77
TPM1-211ENST00000558314 DCPSQ96C86 337 aaKnown RBP19.86■□□□□ 0.77
TPM1-211ENST00000558314 PGAP2Q9UHJ9 254 aa19.86■□□□□ 0.77
TPM1-211ENST00000558314 TRPM7Q96QT4 1865 aa19.86■□□□□ 0.77
TPM1-211ENST00000558314 WTIPA6NIX2 430 aaPredicted RBP19.85■□□□□ 0.77
TPM1-211ENST00000558314 ADM5C9JUS6 153 aa19.85■□□□□ 0.77
TPM1-211ENST00000558314 SAPCD2Q86UD0 394 aa19.85■□□□□ 0.77
TPM1-211ENST00000558314 HSPA8P11142 646 aaKnown RBP19.84■□□□□ 0.77
TPM1-211ENST00000558314 IGHMBP2P38935 993 aaKnown RBP19.84■□□□□ 0.77
TPM1-211ENST00000558314 DNAAF4Q8WXU2 420 aa19.84■□□□□ 0.77
TPM1-211ENST00000558314 MYH16Q9H6N6 1097 aa19.84■□□□□ 0.77
TPM1-211ENST00000558314 PRDM10Q9NQV6 1147 aa19.84■□□□□ 0.77
TPM1-211ENST00000558314 TSKSQ9UJT2 592 aa19.84■□□□□ 0.77
TPM1-211ENST00000558314 VIL1P09327 827 aaKnown RBP19.83■□□□□ 0.77
TPM1-211ENST00000558314 GCKRQ14397 625 aa19.83■□□□□ 0.77
TPM1-211ENST00000558314 WDR63Q8IWG1 891 aa19.83■□□□□ 0.77
TPM1-211ENST00000558314 MINPP1Q9UNW1 487 aa19.83■□□□□ 0.77
TPM1-211ENST00000558314 ASTN2O75129 1339 aaPredicted RBP19.82■□□□□ 0.76
TPM1-211ENST00000558314 H7C1W4 665 aa19.82■□□□□ 0.76
TPM1-211ENST00000558314 VAMP4O75379 141 aa19.82■□□□□ 0.76
TPM1-211ENST00000558314 HUNKP57058 714 aa19.82■□□□□ 0.76
TPM1-211ENST00000558314 RSBN1LQ6PCB5 846 aaPredicted RBP19.82■□□□□ 0.76
TPM1-211ENST00000558314 BSDC1Q9NW68 430 aaPredicted RBP19.82■□□□□ 0.76
TPM1-211ENST00000558314 GGA3Q9NZ52 723 aa19.82■□□□□ 0.76
TPM1-211ENST00000558314 CHMP3Q9Y3E7 222 aa19.82■□□□□ 0.76
TPM1-211ENST00000558314 F6X3S4 739 aa19.81■□□□□ 0.76
TPM1-211ENST00000558314 ITGA6P23229 1130 aa19.81■□□□□ 0.76
TPM1-211ENST00000558314 FAM161AQ3B820 660 aa19.81■□□□□ 0.76
TPM1-211ENST00000558314 SULF1Q8IWU6 871 aa19.81■□□□□ 0.76
TPM1-211ENST00000558314 MPHOSPH8Q99549 860 aa19.81■□□□□ 0.76
TPM1-211ENST00000558314 SPEF2Q9C093 1822 aa19.81■□□□□ 0.76
TPM1-211ENST00000558314 USP17L3A6NCW0 530 aa19.8■□□□□ 0.76
TPM1-211ENST00000558314 USP17L4A6NCW7 530 aa19.8■□□□□ 0.76
TPM1-211ENST00000558314 KCNJ4P48050 445 aa19.8■□□□□ 0.76
TPM1-211ENST00000558314 CCT4P50991 539 aaKnown RBP19.8■□□□□ 0.76
TPM1-211ENST00000558314 USP17L1Q7RTZ2 530 aa19.8■□□□□ 0.76
TPM1-211ENST00000558314 MXD3Q9BW11 206 aa19.8■□□□□ 0.76
TPM1-211ENST00000558314 SPINK5Q9NQ38 1064 aaPredicted RBP19.8■□□□□ 0.76
TPM1-211ENST00000558314 SCN9AQ15858 1988 aa19.8■□□□□ 0.76
TPM1-211ENST00000558314 SCARF1Q14162 830 aa19.79■□□□□ 0.76
TPM1-211ENST00000558314 C2orf69Q8N8R5 385 aa19.79■□□□□ 0.76
TPM1-211ENST00000558314 AGBL3Q8NEM8 1001 aa19.79■□□□□ 0.76
TPM1-211ENST00000558314 LINS1Q8NG48 757 aa19.79■□□□□ 0.76
TPM1-211ENST00000558314 GBA2Q9HCG7 927 aaPredicted RBP19.79■□□□□ 0.76
TPM1-211ENST00000558314 SCAF8Q9UPN6 1271 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms