RNA–Protein interactions for RNA: ENST00000558220.1

SHC4-205, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-205ENST00000558220 ZNF330Q9Y3S2 320 aaPredicted RBP11.09□□□□□ -0.63
SHC4-205ENST00000558220 DICER1Q9UPY3 1922 aaKnown RBP11.09□□□□□ -0.63
SHC4-205ENST00000558220 WDR90Q96KV7 1748 aa11.09□□□□□ -0.63
SHC4-205ENST00000558220 NPHP1O15259 732 aa11.08□□□□□ -0.64
SHC4-205ENST00000558220 HTATSF1O43719 755 aaKnown RBP11.08□□□□□ -0.64
SHC4-205ENST00000558220 DGAT1O75907 488 aa11.08□□□□□ -0.64
SHC4-205ENST00000558220 NEFMP07197 916 aa11.08□□□□□ -0.64
SHC4-205ENST00000558220 CFHP08603 1231 aa11.08□□□□□ -0.64
SHC4-205ENST00000558220 PRKAR2BP31323 418 aa11.08□□□□□ -0.64
SHC4-205ENST00000558220 PRR20EP86478 221 aa11.08□□□□□ -0.64
SHC4-205ENST00000558220 PRR20CP86479 221 aa11.08□□□□□ -0.64
SHC4-205ENST00000558220 PRR20DP86480 221 aa11.08□□□□□ -0.64
SHC4-205ENST00000558220 PRR20BP86481 221 aa11.08□□□□□ -0.64
SHC4-205ENST00000558220 PRR20AP86496 221 aa11.08□□□□□ -0.64
SHC4-205ENST00000558220 SMC1BQ8NDV3 1235 aa11.08□□□□□ -0.64
SHC4-205ENST00000558220 RSPH6AQ9H0K4 717 aa11.08□□□□□ -0.64
SHC4-205ENST00000558220 TBC1D2BQ9UPU7 963 aa11.08□□□□□ -0.64
SHC4-205ENST00000558220 ANKRD31Q8N7Z5 1873 aa11.07□□□□□ -0.64
SHC4-205ENST00000558220 GLTPD2A6NH11 291 aa11.07□□□□□ -0.64
SHC4-205ENST00000558220 U2AF1L5P0DN76 240 aaPredicted RBP11.07□□□□□ -0.64
SHC4-205ENST00000558220 VEGFAP15692 232 aaPredicted RBP11.07□□□□□ -0.64
SHC4-205ENST00000558220 ST5P78524 1137 aa11.07□□□□□ -0.64
SHC4-205ENST00000558220 U2AF1Q01081 240 aaKnown RBP eCLIP11.07□□□□□ -0.64
SHC4-205ENST00000558220 SOGA3Q5TF21 947 aa11.07□□□□□ -0.64
SHC4-205ENST00000558220 TBC1D9BQ66K14 1250 aa11.07□□□□□ -0.64
SHC4-205ENST00000558220 CLEC4GQ6UXB4 293 aa11.07□□□□□ -0.64
SHC4-205ENST00000558220 CNKSR1Q969H4 720 aa11.07□□□□□ -0.64
SHC4-205ENST00000558220 ZNF622Q969S3 477 aaKnown RBP eCLIP11.07□□□□□ -0.64
SHC4-205ENST00000558220 ZNF652Q9Y2D9 606 aa11.07□□□□□ -0.64
SHC4-205ENST00000558220 FER1L6Q2WGJ9 1857 aa11.06□□□□□ -0.64
SHC4-205ENST00000558220 SNRPA1P09661 255 aaKnown RBP11.06□□□□□ -0.64
SHC4-205ENST00000558220 RASSF7Q02833 373 aa11.06□□□□□ -0.64
SHC4-205ENST00000558220 PRR5LQ6MZQ0 368 aa11.06□□□□□ -0.64
SHC4-205ENST00000558220 DZIP3Q86Y13 1208 aaKnown RBP11.06□□□□□ -0.64
SHC4-205ENST00000558220 DNAJC5GQ8N7S2 189 aa11.06□□□□□ -0.64
SHC4-205ENST00000558220 CNBD1Q8NA66 436 aa11.06□□□□□ -0.64
SHC4-205ENST00000558220 PHACTR3Q96KR7 559 aa11.06□□□□□ -0.64
SHC4-205ENST00000558220 TIAM2Q8IVF5 1701 aa11.06□□□□□ -0.64
SHC4-205ENST00000558220 BCORQ6W2J9 1755 aa11.05□□□□□ -0.64
SHC4-205ENST00000558220 SEMA3EO15041 775 aa11.05□□□□□ -0.64
SHC4-205ENST00000558220 A1BGP04217 495 aa11.05□□□□□ -0.64
SHC4-205ENST00000558220 SLC10A3P09131 477 aa11.05□□□□□ -0.64
SHC4-205ENST00000558220 CACNA1SQ13698 1873 aa11.05□□□□□ -0.64
SHC4-205ENST00000558220 ZNF697Q5TEC3 545 aa11.05□□□□□ -0.64
SHC4-205ENST00000558220 STYK1Q6J9G0 422 aa11.05□□□□□ -0.64
SHC4-205ENST00000558220 ARFGEF2Q9Y6D5 1785 aa11.05□□□□□ -0.64
SHC4-205ENST00000558220 CAMTA2O94983 1202 aa11.04□□□□□ -0.64
SHC4-205ENST00000558220 ADH1BP00325 375 aa11.04□□□□□ -0.64
SHC4-205ENST00000558220 PPP2R1AP30153 589 aa11.04□□□□□ -0.64
SHC4-205ENST00000558220 KLRG1Q96E93 195 aa11.04□□□□□ -0.64
SHC4-205ENST00000558220 MASTLQ96GX5 879 aa11.04□□□□□ -0.64
SHC4-205ENST00000558220 PNNQ9H307 717 aaKnown RBP11.04□□□□□ -0.64
SHC4-205ENST00000558220 USP16Q9Y5T5 823 aa11.04□□□□□ -0.64
SHC4-205ENST00000558220 LTBP3Q9NS15 1303 aa11.04□□□□□ -0.64
SHC4-205ENST00000558220 POTECB2RU33 542 aa11.03□□□□□ -0.64
SHC4-205ENST00000558220 NFKBIEO00221 500 aa11.03□□□□□ -0.64
SHC4-205ENST00000558220 C21orf2O43822 256 aa11.03□□□□□ -0.64
SHC4-205ENST00000558220 GDF9O60383 454 aa11.03□□□□□ -0.64
SHC4-205ENST00000558220 TAF7Q15545 349 aaPredicted RBP11.03□□□□□ -0.64
SHC4-205ENST00000558220 ERFEQ4G0M1 354 aa11.03□□□□□ -0.64
SHC4-205ENST00000558220 TPTE2Q6XPS3 522 aa11.03□□□□□ -0.64
SHC4-205ENST00000558220 PNISRQ8TF01 805 aaKnown RBP11.03□□□□□ -0.64
SHC4-205ENST00000558220 TAOK3Q9H2K8 898 aa11.03□□□□□ -0.64
SHC4-205ENST00000558220 COL11A2P13942 1736 aaPredicted RBP11.02□□□□□ -0.65
SHC4-205ENST00000558220 TNFRSF10AO00220 468 aa11.02□□□□□ -0.65
SHC4-205ENST00000558220 KCNQ3O43525 872 aa11.02□□□□□ -0.65
SHC4-205ENST00000558220 SRGNP10124 158 aa11.02□□□□□ -0.65
SHC4-205ENST00000558220 MCM10Q7L590 875 aa11.02□□□□□ -0.65
SHC4-205ENST00000558220 NBPF5PQ86XG9 351 aaPredicted RBP11.02□□□□□ -0.65
SHC4-205ENST00000558220 SLX4Q8IY92 1834 aa11.02□□□□□ -0.65
SHC4-205ENST00000558220 DLG5Q8TDM6 1919 aa11.01□□□□□ -0.65
SHC4-205ENST00000558220 FAM187AA6NFU0 413 aa11.01□□□□□ -0.65
SHC4-205ENST00000558220 NR1I2O75469 434 aa11.01□□□□□ -0.65
SHC4-205ENST00000558220 PLA2G2CQ5R387 149 aa11.01□□□□□ -0.65
SHC4-205ENST00000558220 JMYQ8N9B5 988 aa11.01□□□□□ -0.65
SHC4-205ENST00000558220 LAMB4A4D0S4 1761 aa11□□□□□ -0.65
SHC4-205ENST00000558220 NPR1P16066 1061 aa11□□□□□ -0.65
SHC4-205ENST00000558220 GTF2E1P29083 439 aaPredicted RBP11□□□□□ -0.65
SHC4-205ENST00000558220 ALDH1B1P30837 517 aa11□□□□□ -0.65
SHC4-205ENST00000558220 PRELPP51888 382 aa11□□□□□ -0.65
SHC4-205ENST00000558220 PRPF40BQ6NWY9 871 aaKnown RBP11□□□□□ -0.65
SHC4-205ENST00000558220 CCDC24Q8N4L8 307 aa11□□□□□ -0.65
SHC4-205ENST00000558220 SLC6A16Q9GZN6 736 aa11□□□□□ -0.65
SHC4-205ENST00000558220 NIP7Q9Y221 180 aaKnown RBP eCLIP11□□□□□ -0.65
SHC4-205ENST00000558220 SCN4AP35499 1836 aa11□□□□□ -0.65
SHC4-205ENST00000558220 PCNTO95613 3336 aa10.99□□□□□ -0.65
SHC4-205ENST00000558220 KLRG2A4D1S0 409 aaPredicted RBP10.99□□□□□ -0.65
SHC4-205ENST00000558220 CCDC93Q567U6 631 aa10.99□□□□□ -0.65
SHC4-205ENST00000558220 NYXQ9GZU5 481 aa10.99□□□□□ -0.65
SHC4-205ENST00000558220 NUP98P52948 1817 aa10.99□□□□□ -0.65
SHC4-205ENST00000558220 IQCA1LA6NCM1 817 aa10.98□□□□□ -0.65
SHC4-205ENST00000558220 ERVV-1B6SEH8 477 aa10.98□□□□□ -0.65
SHC4-205ENST00000558220 DCTN1Q14203 1278 aa10.98□□□□□ -0.65
SHC4-205ENST00000558220 RTKN2Q8IZC4 609 aa10.98□□□□□ -0.65
SHC4-205ENST00000558220 KDM3BQ7LBC6 1761 aa10.98□□□□□ -0.65
SHC4-205ENST00000558220 PRAMEF22A3QJZ6 481 aa10.97□□□□□ -0.65
SHC4-205ENST00000558220 PIP4K2AP48426 406 aaPredicted RBP10.97□□□□□ -0.65
SHC4-205ENST00000558220 HTRA3P83110 453 aa10.97□□□□□ -0.65
SHC4-205ENST00000558220 GRIPAP1Q4V328 841 aa10.97□□□□□ -0.65
SHC4-205ENST00000558220 NBPF10Q6P3W6 841 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms