RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 DBNDD1Q9H9R9 158 aa21.24■□□□□ 0.99
NEDD4-212ENST00000557845 BSDC1Q9NW68 430 aaPredicted RBP21.24■□□□□ 0.99
NEDD4-212ENST00000557845 GPRC5DQ9NZD1 345 aa21.24■□□□□ 0.99
NEDD4-212ENST00000557845 GGA1Q9UJY5 639 aa21.24■□□□□ 0.99
NEDD4-212ENST00000557845 UFL1O94874 794 aa21.23■□□□□ 0.99
NEDD4-212ENST00000557845 GMPSP49915 693 aaPredicted RBP21.23■□□□□ 0.99
NEDD4-212ENST00000557845 USP50Q70EL3 339 aaPredicted RBP21.23■□□□□ 0.99
NEDD4-212ENST00000557845 KLRG1Q96E93 195 aa21.23■□□□□ 0.99
NEDD4-212ENST00000557845 DOK7Q18PE1 504 aa21.22■□□□□ 0.99
NEDD4-212ENST00000557845 MAP1SQ66K74 1059 aaPredicted RBP21.22■□□□□ 0.99
NEDD4-212ENST00000557845 CNTROBQ8N137 903 aa21.22■□□□□ 0.99
NEDD4-212ENST00000557845 MRPL50Q8N5N7 158 aaKnown RBP21.22■□□□□ 0.99
NEDD4-212ENST00000557845 BCL2L13Q9BXK5 485 aa21.22■□□□□ 0.99
NEDD4-212ENST00000557845 MINPP1Q9UNW1 487 aa21.22■□□□□ 0.99
NEDD4-212ENST00000557845 XDHP47989 1333 aa21.22■□□□□ 0.99
NEDD4-212ENST00000557845 PASKQ96RG2 1323 aa21.22■□□□□ 0.99
NEDD4-212ENST00000557845 SPEF2Q9C093 1822 aa21.22■□□□□ 0.99
NEDD4-212ENST00000557845 ECE2O60344 883 aa21.21■□□□□ 0.99
NEDD4-212ENST00000557845 ITGA6P23229 1130 aa21.21■□□□□ 0.99
NEDD4-212ENST00000557845 SLC4A10Q6U841 1118 aa21.21■□□□□ 0.99
NEDD4-212ENST00000557845 TRMT2AQ8IZ69 625 aaKnown RBP21.21■□□□□ 0.99
NEDD4-212ENST00000557845 ADARB2Q9NS39 739 aaKnown RBP21.21■□□□□ 0.99
NEDD4-212ENST00000557845 ALDH1L1O75891 902 aa21.2■□□□□ 0.98
NEDD4-212ENST00000557845 ATP2B4P23634 1241 aa21.2■□□□□ 0.98
NEDD4-212ENST00000557845 IGHMBP2P38935 993 aaKnown RBP21.2■□□□□ 0.98
NEDD4-212ENST00000557845 SRCIN1Q9C0H9 1055 aa21.2■□□□□ 0.98
NEDD4-212ENST00000557845 KCNQ5Q9NR82 932 aa21.2■□□□□ 0.98
NEDD4-212ENST00000557845 G3V3G9 751 aa21.19■□□□□ 0.98
NEDD4-212ENST00000557845 PSMD14O00487 310 aa21.19■□□□□ 0.98
NEDD4-212ENST00000557845 FOXO4P98177 505 aa21.19■□□□□ 0.98
NEDD4-212ENST00000557845 FAM161AQ3B820 660 aa21.19■□□□□ 0.98
NEDD4-212ENST00000557845 DCAF8Q5TAQ9 597 aa21.19■□□□□ 0.98
NEDD4-212ENST00000557845 SSH1Q8WYL5 1049 aa21.19■□□□□ 0.98
NEDD4-212ENST00000557845 CREBZFQ9NS37 354 aa21.19■□□□□ 0.98
NEDD4-212ENST00000557845 CNOT7Q9UIV1 285 aaKnown RBP21.19■□□□□ 0.98
NEDD4-212ENST00000557845 ZBTB12Q9Y330 459 aaPredicted RBP21.19■□□□□ 0.98
NEDD4-212ENST00000557845 GRM8O00222 908 aa21.18■□□□□ 0.98
NEDD4-212ENST00000557845 C9orf78Q9NZ63 289 aaPredicted RBP21.18■□□□□ 0.98
NEDD4-212ENST00000557845 ANKRD18BA2A2Z9 1011 aa21.17■□□□□ 0.98
NEDD4-212ENST00000557845 WTIPA6NIX2 430 aaPredicted RBP21.17■□□□□ 0.98
NEDD4-212ENST00000557845 DIEXFQ68CQ4 756 aaKnown RBP21.17■□□□□ 0.98
NEDD4-212ENST00000557845 JMYQ8N9B5 988 aa21.17■□□□□ 0.98
NEDD4-212ENST00000557845 DPF2Q92785 391 aa21.17■□□□□ 0.98
NEDD4-212ENST00000557845 MPHOSPH8Q99549 860 aa21.17■□□□□ 0.98
NEDD4-212ENST00000557845 PTPRCP08575 1304 aa21.16■□□□□ 0.98
NEDD4-212ENST00000557845 CCT4P50991 539 aaKnown RBP21.16■□□□□ 0.98
NEDD4-212ENST00000557845 ALDH1L2Q3SY69 923 aa21.16■□□□□ 0.98
NEDD4-212ENST00000557845 MIER1Q8N108 512 aa21.16■□□□□ 0.98
NEDD4-212ENST00000557845 SCN9AQ15858 1988 aa21.16■□□□□ 0.98
NEDD4-212ENST00000557845 TMEM88BA6NKF7 163 aa21.15■□□□□ 0.98
NEDD4-212ENST00000557845 H7C1D1 291 aa21.15■□□□□ 0.98
NEDD4-212ENST00000557845 VIL1P09327 827 aaKnown RBP21.15■□□□□ 0.98
NEDD4-212ENST00000557845 IFIT5Q13325 482 aaKnown RBP21.15■□□□□ 0.98
NEDD4-212ENST00000557845 EPHA10Q5JZY3 1008 aa21.15■□□□□ 0.98
NEDD4-212ENST00000557845 LMBR1LQ6UX01 489 aa21.15■□□□□ 0.98
NEDD4-212ENST00000557845 SHTN1A0MZ66 631 aa21.14■□□□□ 0.97
NEDD4-212ENST00000557845 RPS12P25398 132 aaKnown RBP21.14■□□□□ 0.97
NEDD4-212ENST00000557845 HIRAP54198 1017 aaPredicted RBP21.14■□□□□ 0.97
NEDD4-212ENST00000557845 MICALL2Q8IY33 904 aa21.14■□□□□ 0.97
NEDD4-212ENST00000557845 ANKRD2Q9GZV1 360 aa21.14■□□□□ 0.97
NEDD4-212ENST00000557845 PGAP2Q9UHJ9 254 aa21.14■□□□□ 0.97
NEDD4-212ENST00000557845 LEMD3Q9Y2U8 911 aa21.14■□□□□ 0.97
NEDD4-212ENST00000557845 CHMP3Q9Y3E7 222 aa21.14■□□□□ 0.97
NEDD4-212ENST00000557845 PODNQ7Z5L7 613 aa21.13■□□□□ 0.97
NEDD4-212ENST00000557845 CT47B1P0C2W7 299 aaPredicted RBP21.12■□□□□ 0.97
NEDD4-212ENST00000557845 NBPF7P0C2Y1 421 aaPredicted RBP21.12■□□□□ 0.97
NEDD4-212ENST00000557845 CHRNDQ07001 517 aa21.12■□□□□ 0.97
NEDD4-212ENST00000557845 ZC3H15Q8WU90 426 aaKnown RBP21.12■□□□□ 0.97
NEDD4-212ENST00000557845 MED23Q9ULK4 1368 aa21.11■□□□□ 0.97
NEDD4-212ENST00000557845 ZNF804BA4D1E1 1349 aa21.11■□□□□ 0.97
NEDD4-212ENST00000557845 UTYO14607 1347 aa21.11■□□□□ 0.97
NEDD4-212ENST00000557845 CCDC57Q2TAC2 916 aa21.11■□□□□ 0.97
NEDD4-212ENST00000557845 SAMD7Q7Z3H4 446 aa21.11■□□□□ 0.97
NEDD4-212ENST00000557845 TRPM4Q8TD43 1214 aa21.11■□□□□ 0.97
NEDD4-212ENST00000557845 SUCLG2Q96I99 432 aa21.11■□□□□ 0.97
NEDD4-212ENST00000557845 SMC4Q9NTJ3 1288 aa21.11■□□□□ 0.97
NEDD4-212ENST00000557845 MKRN1Q9UHC7 482 aaKnown RBP21.11■□□□□ 0.97
NEDD4-212ENST00000557845 PSME4Q14997 1843 aa21.11■□□□□ 0.97
NEDD4-212ENST00000557845 FMR1Q06787 632 aaKnown RBP eCLIP21.1■□□□□ 0.97
NEDD4-212ENST00000557845 TXNRD3Q86VQ6 643 aa21.1■□□□□ 0.97
NEDD4-212ENST00000557845 KAZALD1Q96I82 304 aa21.1■□□□□ 0.97
NEDD4-212ENST00000557845 RSBN1LQ6PCB5 846 aaPredicted RBP21.09■□□□□ 0.97
NEDD4-212ENST00000557845 AGBL3Q8NEM8 1001 aa21.09■□□□□ 0.97
NEDD4-212ENST00000557845 ZNF594Q96JF6 807 aaPredicted RBP21.09■□□□□ 0.97
NEDD4-212ENST00000557845 USP17L3A6NCW0 530 aa21.08■□□□□ 0.97
NEDD4-212ENST00000557845 USP17L4A6NCW7 530 aa21.08■□□□□ 0.97
NEDD4-212ENST00000557845 TRAF5O00463 557 aa21.08■□□□□ 0.97
NEDD4-212ENST00000557845 TBC1D10BQ4KMP7 808 aaPredicted RBP21.08■□□□□ 0.97
NEDD4-212ENST00000557845 RBM26Q5T8P6 1007 aaKnown RBP21.08■□□□□ 0.97
NEDD4-212ENST00000557845 USP17L1Q7RTZ2 530 aa21.08■□□□□ 0.97
NEDD4-212ENST00000557845 TRPM7Q96QT4 1865 aa21.08■□□□□ 0.97
NEDD4-212ENST00000557845 COA1Q9GZY4 146 aa21.08■□□□□ 0.97
NEDD4-212ENST00000557845 TAF5LO75529 589 aa21.07■□□□□ 0.96
NEDD4-212ENST00000557845 EGFRP00533 1210 aa21.07■□□□□ 0.96
NEDD4-212ENST00000557845 KCNJ4P48050 445 aa21.07■□□□□ 0.96
NEDD4-212ENST00000557845 TAF7LQ5H9L4 462 aa21.07■□□□□ 0.96
NEDD4-212ENST00000557845 LDHAL6AQ6ZMR3 332 aa21.07■□□□□ 0.96
NEDD4-212ENST00000557845 HELBQ8NG08 1087 aaPredicted RBP21.07■□□□□ 0.96
NEDD4-212ENST00000557845 CNTNAP1P78357 1384 aa21.07■□□□□ 0.96
NEDD4-212ENST00000557845 KLRK1P26718 216 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms