RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 ITPKCQ96DU7 683 aa9.69□□□□□ -0.86
ZEB1-210ENST00000557827 TRAK1Q9UPV9 953 aa9.69□□□□□ -0.86
ZEB1-210ENST00000557827 PPME1Q9Y570 386 aa9.69□□□□□ -0.86
ZEB1-210ENST00000557827 PPP1R12AO14974 1030 aaPredicted RBP9.68□□□□□ -0.86
ZEB1-210ENST00000557827 TATP17735 454 aaPredicted RBP9.68□□□□□ -0.86
ZEB1-210ENST00000557827 LIAT1Q6ZQX7 453 aa9.68□□□□□ -0.86
ZEB1-210ENST00000557827 PMEPA1Q969W9 287 aa9.68□□□□□ -0.86
ZEB1-210ENST00000557827 ANAPC16Q96DE5 110 aa9.68□□□□□ -0.86
ZEB1-210ENST00000557827 EHD4Q9H223 541 aa9.68□□□□□ -0.86
ZEB1-210ENST00000557827 KCNQ5Q9NR82 932 aa9.68□□□□□ -0.86
ZEB1-210ENST00000557827 PLA2G2EQ9NZK7 142 aa9.68□□□□□ -0.86
ZEB1-210ENST00000557827 PRKAG3Q9UGI9 489 aa9.68□□□□□ -0.86
ZEB1-210ENST00000557827 R3HCC1Q9Y3T6 440 aaKnown RBP9.68□□□□□ -0.86
ZEB1-210ENST00000557827 PARNO95453 639 aaKnown RBP9.67□□□□□ -0.86
ZEB1-210ENST00000557827 RLBP1P12271 317 aa9.67□□□□□ -0.86
ZEB1-210ENST00000557827 FCGRTP55899 365 aa9.67□□□□□ -0.86
ZEB1-210ENST00000557827 CTC1Q2NKJ3 1217 aa9.67□□□□□ -0.86
ZEB1-210ENST00000557827 BICDL1Q6ZP65 573 aa9.67□□□□□ -0.86
ZEB1-210ENST00000557827 ABI2Q9NYB9 513 aaPredicted RBP9.67□□□□□ -0.86
ZEB1-210ENST00000557827 PRKAB1Q9Y478 270 aa9.67□□□□□ -0.86
ZEB1-210ENST00000557827 A0A1W2PP55 124 aa9.66□□□□□ -0.86
ZEB1-210ENST00000557827 CCDC85CA6NKD9 419 aa9.66□□□□□ -0.86
ZEB1-210ENST00000557827 GREM1O60565 184 aa9.66□□□□□ -0.86
ZEB1-210ENST00000557827 ITGBL1O95965 494 aaPredicted RBP9.66□□□□□ -0.86
ZEB1-210ENST00000557827 ALDH1A1P00352 501 aa9.66□□□□□ -0.86
ZEB1-210ENST00000557827 GARTP22102 1010 aa9.66□□□□□ -0.86
ZEB1-210ENST00000557827 GRNP28799 593 aaKnown RBP9.66□□□□□ -0.86
ZEB1-210ENST00000557827 GPC1P35052 558 aa9.66□□□□□ -0.86
ZEB1-210ENST00000557827 MAP3K11Q16584 847 aa9.66□□□□□ -0.86
ZEB1-210ENST00000557827 CCDC181Q5TID7 509 aa9.66□□□□□ -0.86
ZEB1-210ENST00000557827 RPUSD2Q8IZ73 545 aaKnown RBP9.66□□□□□ -0.86
ZEB1-210ENST00000557827 SH3TC2Q8TF17 1288 aa9.66□□□□□ -0.86
ZEB1-210ENST00000557827 ANKRD24Q8TF21 1146 aa9.66□□□□□ -0.86
ZEB1-210ENST00000557827 RHOVQ96L33 236 aa9.66□□□□□ -0.86
ZEB1-210ENST00000557827 KLF16Q9BXK1 252 aaPredicted RBP9.66□□□□□ -0.86
ZEB1-210ENST00000557827 KANSL2Q9H9L4 492 aa9.66□□□□□ -0.86
ZEB1-210ENST00000557827 FANCLQ9NW38 375 aa9.66□□□□□ -0.86
ZEB1-210ENST00000557827 SUGT1Q9Y2Z0 365 aa9.66□□□□□ -0.86
ZEB1-210ENST00000557827 SUPT16HQ9Y5B9 1047 aaKnown RBP9.66□□□□□ -0.86
ZEB1-210ENST00000557827 XYLBO75191 536 aa9.65□□□□□ -0.86
ZEB1-210ENST00000557827 CDC45O75419 566 aa9.65□□□□□ -0.86
ZEB1-210ENST00000557827 ZIC2O95409 532 aaPredicted RBP9.65□□□□□ -0.86
ZEB1-210ENST00000557827 CES1P23141 567 aa9.65□□□□□ -0.86
ZEB1-210ENST00000557827 PHKA2P46019 1235 aa9.65□□□□□ -0.86
ZEB1-210ENST00000557827 VEGFBP49765 207 aa9.65□□□□□ -0.86
ZEB1-210ENST00000557827 FAM160A1Q05DH4 1040 aa9.65□□□□□ -0.86
ZEB1-210ENST00000557827 PCNX4Q63HM2 1172 aa9.65□□□□□ -0.86
ZEB1-210ENST00000557827 SV2BQ7L1I2 683 aa9.65□□□□□ -0.86
ZEB1-210ENST00000557827 DHX37Q8IY37 1157 aaKnown RBP9.65□□□□□ -0.86
ZEB1-210ENST00000557827 LILRB2Q8N423 598 aa9.65□□□□□ -0.86
ZEB1-210ENST00000557827 PHC3Q8NDX5 983 aa9.65□□□□□ -0.86
ZEB1-210ENST00000557827 SLKQ9H2G2 1235 aaPredicted RBP9.65□□□□□ -0.86
ZEB1-210ENST00000557827 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.65□□□□□ -0.86
ZEB1-210ENST00000557827 UBP1Q9NZI7 540 aa9.65□□□□□ -0.86
ZEB1-210ENST00000557827 PPM1HQ9ULR3 514 aa9.65□□□□□ -0.86
ZEB1-210ENST00000557827 AKAP2Q9Y2D5 859 aa9.65□□□□□ -0.86
ZEB1-210ENST00000557827 WASF2Q9Y6W5 498 aa9.65□□□□□ -0.86
ZEB1-210ENST00000557827 PF4P02776 101 aa9.64□□□□□ -0.87
ZEB1-210ENST00000557827 RNF144AP50876 292 aaPredicted RBP9.64□□□□□ -0.87
ZEB1-210ENST00000557827 LRRC69Q6ZNQ3 347 aa9.64□□□□□ -0.87
ZEB1-210ENST00000557827 SRRTQ9BXP5 876 aaKnown RBP9.64□□□□□ -0.87
ZEB1-210ENST00000557827 CCDC113Q9H0I3 377 aa9.64□□□□□ -0.87
ZEB1-210ENST00000557827 ZFAND3Q9H8U3 227 aa9.64□□□□□ -0.87
ZEB1-210ENST00000557827 LATS2Q9NRM7 1088 aa9.64□□□□□ -0.87
ZEB1-210ENST00000557827 FBXO24O75426 580 aa9.63□□□□□ -0.87
ZEB1-210ENST00000557827 EPB42P16452 691 aa9.63□□□□□ -0.87
ZEB1-210ENST00000557827 PLEKHG6Q3KR16 790 aa9.63□□□□□ -0.87
ZEB1-210ENST00000557827 TTC39BQ5VTQ0 682 aaPredicted RBP9.63□□□□□ -0.87
ZEB1-210ENST00000557827 PRPF40BQ6NWY9 871 aaKnown RBP9.63□□□□□ -0.87
ZEB1-210ENST00000557827 NLRP13Q86W25 1043 aa9.63□□□□□ -0.87
ZEB1-210ENST00000557827 APPBP2Q92624 585 aa9.63□□□□□ -0.87
ZEB1-210ENST00000557827 ZIC5Q96T25 663 aa9.63□□□□□ -0.87
ZEB1-210ENST00000557827 DNAJC7Q99615 494 aa9.63□□□□□ -0.87
ZEB1-210ENST00000557827 OXCT2Q9BYC2 517 aaPredicted RBP9.63□□□□□ -0.87
ZEB1-210ENST00000557827 TLR6Q9Y2C9 796 aa9.63□□□□□ -0.87
ZEB1-210ENST00000557827 MSRB2Q9Y3D2 182 aa9.63□□□□□ -0.87
ZEB1-210ENST00000557827 SPATA31C2B4DYI2 1134 aa9.62□□□□□ -0.87
ZEB1-210ENST00000557827 SMAD7O15105 426 aaKnown RBP9.62□□□□□ -0.87
ZEB1-210ENST00000557827 EGFRP00533 1210 aa9.62□□□□□ -0.87
ZEB1-210ENST00000557827 APOBRQ0VD83 1088 aa9.62□□□□□ -0.87
ZEB1-210ENST00000557827 PEAR1Q5VY43 1037 aaPredicted RBP9.62□□□□□ -0.87
ZEB1-210ENST00000557827 GOLM1Q8NBJ4 401 aa9.62□□□□□ -0.87
ZEB1-210ENST00000557827 TRPM4Q8TD43 1214 aa9.62□□□□□ -0.87
ZEB1-210ENST00000557827 NKD1Q969G9 470 aa9.62□□□□□ -0.87
ZEB1-210ENST00000557827 EMID1Q96A84 441 aaPredicted RBP9.62□□□□□ -0.87
ZEB1-210ENST00000557827 SHDQ96IW2 340 aa9.62□□□□□ -0.87
ZEB1-210ENST00000557827 TMX1Q9H3N1 280 aa9.62□□□□□ -0.87
ZEB1-210ENST00000557827 DDX56Q9NY93 547 aaKnown RBP9.62□□□□□ -0.87
ZEB1-210ENST00000557827 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.62□□□□□ -0.87
ZEB1-210ENST00000557827 TMEM238LA0A1B0GVL6 79 aa9.61□□□□□ -0.87
ZEB1-210ENST00000557827 ESYT3A0FGR9 886 aa9.61□□□□□ -0.87
ZEB1-210ENST00000557827 EDN3P14138 238 aa9.61□□□□□ -0.87
ZEB1-210ENST00000557827 ATP4AP20648 1035 aa9.61□□□□□ -0.87
ZEB1-210ENST00000557827 LIG3P49916 1009 aa9.61□□□□□ -0.87
ZEB1-210ENST00000557827 AMPD3Q01432 767 aa9.61□□□□□ -0.87
ZEB1-210ENST00000557827 CAMK2GQ13555 558 aaPredicted RBP9.61□□□□□ -0.87
ZEB1-210ENST00000557827 SNAP47Q5SQN1 464 aa9.61□□□□□ -0.87
ZEB1-210ENST00000557827 CELF2-AS1Q8N7Q2 184 aa9.61□□□□□ -0.87
ZEB1-210ENST00000557827 IRF2BPLQ9H1B7 796 aa9.61□□□□□ -0.87
ZEB1-210ENST00000557827 SLC52A1Q9NWF4 448 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms