RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 CNTNAP1P78357 1384 aa15.33■□□□□ 0.04
RCCD1-209ENST00000557750 FOXN1O15353 648 aa15.33■□□□□ 0.04
RCCD1-209ENST00000557750 CSF1RP07333 972 aa15.33■□□□□ 0.04
RCCD1-209ENST00000557750 GRAPQ13588 217 aa15.33■□□□□ 0.04
RCCD1-209ENST00000557750 FAM161AQ3B820 660 aa15.33■□□□□ 0.04
RCCD1-209ENST00000557750 OLFM4Q6UX06 510 aa15.33■□□□□ 0.04
RCCD1-209ENST00000557750 GRAPLQ8TC17 118 aaPredicted RBP15.33■□□□□ 0.04
RCCD1-209ENST00000557750 SEC31BQ9NQW1 1179 aa15.33■□□□□ 0.04
RCCD1-209ENST00000557750 ZNF277Q9NRM2 450 aaPredicted RBP15.33■□□□□ 0.04
RCCD1-209ENST00000557750 DDX19BQ9UMR2 479 aa15.33■□□□□ 0.04
RCCD1-209ENST00000557750 LRRFIP2Q9Y608 721 aaKnown RBP15.33■□□□□ 0.04
RCCD1-209ENST00000557750 ZNF541Q9H0D2 1346 aa15.32■□□□□ 0.04
RCCD1-209ENST00000557750 PPEF1O14829 653 aaPredicted RBP15.32■□□□□ 0.04
RCCD1-209ENST00000557750 ZBTB7BO15156 539 aaPredicted RBP15.32■□□□□ 0.04
RCCD1-209ENST00000557750 GNAI2P04899 355 aa15.32■□□□□ 0.04
RCCD1-209ENST00000557750 ITGA6P23229 1130 aa15.32■□□□□ 0.04
RCCD1-209ENST00000557750 FKBP4Q02790 459 aaKnown RBP eCLIP15.32■□□□□ 0.04
RCCD1-209ENST00000557750 CELF1Q92879 486 aaKnown RBP15.32■□□□□ 0.04
RCCD1-209ENST00000557750 CDC5LQ99459 802 aaKnown RBP15.32■□□□□ 0.04
RCCD1-209ENST00000557750 LAMB2P55268 1798 aa15.31■□□□□ 0.04
RCCD1-209ENST00000557750 ITGBL1O95965 494 aaPredicted RBP15.31■□□□□ 0.04
RCCD1-209ENST00000557750 IFIT5Q13325 482 aaKnown RBP15.31■□□□□ 0.04
RCCD1-209ENST00000557750 CCDC57Q2TAC2 916 aa15.31■□□□□ 0.04
RCCD1-209ENST00000557750 RABL6Q3YEC7 729 aaPredicted RBP15.31■□□□□ 0.04
RCCD1-209ENST00000557750 EAPPQ56P03 285 aaPredicted RBP15.31■□□□□ 0.04
RCCD1-209ENST00000557750 ANKRD44Q8N8A2 993 aa15.31■□□□□ 0.04
RCCD1-209ENST00000557750 RTL9Q8NET4 1388 aa15.3■□□□□ 0.04
RCCD1-209ENST00000557750 ANKRD18BA2A2Z9 1011 aa15.3■□□□□ 0.04
RCCD1-209ENST00000557750 TMEM88BA6NKF7 163 aa15.3■□□□□ 0.04
RCCD1-209ENST00000557750 BBOX1O75936 387 aa15.3■□□□□ 0.04
RCCD1-209ENST00000557750 VEGFBP49765 207 aa15.3■□□□□ 0.04
RCCD1-209ENST00000557750 RPS8P62241 208 aaKnown RBP15.3■□□□□ 0.04
RCCD1-209ENST00000557750 ANKRD18AQ8IVF6 992 aa15.3■□□□□ 0.04
RCCD1-209ENST00000557750 TMX4Q9H1E5 349 aaPredicted RBP15.3■□□□□ 0.04
RCCD1-209ENST00000557750 SCN4AP35499 1836 aa15.29■□□□□ 0.04
RCCD1-209ENST00000557750 TAF7LQ5H9L4 462 aa15.29■□□□□ 0.04
RCCD1-209ENST00000557750 CHMP4BQ9H444 224 aaKnown RBP15.29■□□□□ 0.04
RCCD1-209ENST00000557750 C1orf115Q9H7X2 142 aa15.29■□□□□ 0.04
RCCD1-209ENST00000557750 HACL1Q9UJ83 578 aa15.29■□□□□ 0.04
RCCD1-209ENST00000557750 CLEC11AQ9Y240 323 aa15.29■□□□□ 0.04
RCCD1-209ENST00000557750 EPHX2P34913 555 aa15.28■□□□□ 0.04
RCCD1-209ENST00000557750 IGHMBP2P38935 993 aaKnown RBP15.28■□□□□ 0.04
RCCD1-209ENST00000557750 RTKN2Q8IZC4 609 aa15.28■□□□□ 0.04
RCCD1-209ENST00000557750 PRDM10Q9NQV6 1147 aa15.28■□□□□ 0.04
RCCD1-209ENST00000557750 TMC4Q7Z404 712 aa15.28■□□□□ 0.04
RCCD1-209ENST00000557750 MPHOSPH8Q99549 860 aa15.28■□□□□ 0.04
RCCD1-209ENST00000557750 ATP6V0A2Q9Y487 856 aa15.28■□□□□ 0.04
RCCD1-209ENST00000557750 IARSP41252 1262 aaKnown RBP15.27■□□□□ 0.03
RCCD1-209ENST00000557750 CTCFP49711 727 aaPredicted RBP15.27■□□□□ 0.03
RCCD1-209ENST00000557750 SLC51AQ86UW1 340 aa15.27■□□□□ 0.03
RCCD1-209ENST00000557750 AIDAQ96BJ3 306 aa15.27■□□□□ 0.03
RCCD1-209ENST00000557750 FZD9O00144 591 aa15.26■□□□□ 0.03
RCCD1-209ENST00000557750 MAP1SQ66K74 1059 aaPredicted RBP15.26■□□□□ 0.03
RCCD1-209ENST00000557750 SP8Q8IXZ3 490 aa15.26■□□□□ 0.03
RCCD1-209ENST00000557750 ZNF594Q96JF6 807 aaPredicted RBP15.26■□□□□ 0.03
RCCD1-209ENST00000557750 ZBTB40Q9NUA8 1239 aa15.26■□□□□ 0.03
RCCD1-209ENST00000557750 SRGAP3O43295 1099 aa15.25■□□□□ 0.03
RCCD1-209ENST00000557750 CC2D2BQ6DHV5 1058 aa15.25■□□□□ 0.03
RCCD1-209ENST00000557750 CNTROBQ8N137 903 aa15.25■□□□□ 0.03
RCCD1-209ENST00000557750 CRBNQ96SW2 442 aa15.25■□□□□ 0.03
RCCD1-209ENST00000557750 BSDC1Q9NW68 430 aaPredicted RBP15.25■□□□□ 0.03
RCCD1-209ENST00000557750 WBP1LQ9NX94 342 aa15.25■□□□□ 0.03
RCCD1-209ENST00000557750 LDHAL6AQ6ZMR3 332 aa15.25■□□□□ 0.03
RCCD1-209ENST00000557750 PNMA8AQ86V59 439 aaPredicted RBP15.25■□□□□ 0.03
RCCD1-209ENST00000557750 COL4A1P02462 1669 aa15.24■□□□□ 0.03
RCCD1-209ENST00000557750 ADAMTSL1Q8N6G6 1762 aa15.24■□□□□ 0.03
RCCD1-209ENST00000557750 MTX1Q13505 466 aa15.24■□□□□ 0.03
RCCD1-209ENST00000557750 GPC2Q8N158 579 aa15.24■□□□□ 0.03
RCCD1-209ENST00000557750 KLHDC4Q8TBB5 520 aa15.24■□□□□ 0.03
RCCD1-209ENST00000557750 CNNM1Q9NRU3 951 aa15.24■□□□□ 0.03
RCCD1-209ENST00000557750 SNED1Q8TER0 1413 aa15.24■□□□□ 0.03
RCCD1-209ENST00000557750 RASSF10A6NK89 507 aa15.23■□□□□ 0.03
RCCD1-209ENST00000557750 LBX1P52954 281 aa15.23■□□□□ 0.03
RCCD1-209ENST00000557750 DEFB115Q30KQ5 88 aa15.23■□□□□ 0.03
RCCD1-209ENST00000557750 DPP8Q6V1X1 898 aaPredicted RBP15.23■□□□□ 0.03
RCCD1-209ENST00000557750 PSMD1Q99460 953 aa15.23■□□□□ 0.03
RCCD1-209ENST00000557750 ANKIB1Q9P2G1 1089 aa15.23■□□□□ 0.03
RCCD1-209ENST00000557750 NSFL1CQ9UNZ2 370 aaKnown RBP15.23■□□□□ 0.03
RCCD1-209ENST00000557750 MYH3P11055 1940 aa15.23■□□□□ 0.03
RCCD1-209ENST00000557750 PNMA6EA0A0J9YXQ4 647 aa15.22■□□□□ 0.03
RCCD1-209ENST00000557750 RFX5P48382 616 aaPredicted RBP15.22■□□□□ 0.03
RCCD1-209ENST00000557750 IRX6P78412 446 aaPredicted RBP15.22■□□□□ 0.03
RCCD1-209ENST00000557750 GRIPAP1Q4V328 841 aa15.22■□□□□ 0.03
RCCD1-209ENST00000557750 CEP85Q6P2H3 762 aa15.22■□□□□ 0.03
RCCD1-209ENST00000557750 MPNDQ8N594 471 aa15.22■□□□□ 0.03
RCCD1-209ENST00000557750 JDP2Q8WYK2 163 aa15.22■□□□□ 0.03
RCCD1-209ENST00000557750 MINPP1Q9UNW1 487 aa15.22■□□□□ 0.03
RCCD1-209ENST00000557750 GPSM2P81274 684 aa15.22■□□□□ 0.03
RCCD1-209ENST00000557750 ATP8B2P98198 1209 aa15.22■□□□□ 0.03
RCCD1-209ENST00000557750 PTPN12Q05209 780 aaKnown RBP15.22■□□□□ 0.03
RCCD1-209ENST00000557750 SIL1Q9H173 461 aa15.22■□□□□ 0.03
RCCD1-209ENST00000557750 GJA3Q9Y6H8 435 aa15.22■□□□□ 0.03
RCCD1-209ENST00000557750 COL4A5P29400 1685 aa15.21■□□□□ 0.03
RCCD1-209ENST00000557750 CHRNDQ07001 517 aa15.21■□□□□ 0.03
RCCD1-209ENST00000557750 PUS3Q9BZE2 481 aaKnown RBP15.21■□□□□ 0.03
RCCD1-209ENST00000557750 ABT1Q9ULW3 272 aaKnown RBP15.21■□□□□ 0.03
RCCD1-209ENST00000557750 PA2G4Q9UQ80 394 aaKnown RBP15.21■□□□□ 0.03
RCCD1-209ENST00000557750 WDR33Q9C0J8 1336 aaKnown RBP15.21■□□□□ 0.02
RCCD1-209ENST00000557750 TAF1P21675 1872 aa15.2■□□□□ 0.02
RCCD1-209ENST00000557750 HSPA8P11142 646 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms