RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 TTC39BQ5VTQ0 682 aaPredicted RBP5.98□□□□□ -1.45
GPHN-216ENST00000557678 NLRP13Q86W25 1043 aa5.98□□□□□ -1.45
GPHN-216ENST00000557678 GPR152Q8TDT2 470 aa5.98□□□□□ -1.45
GPHN-216ENST00000557678 WFDC12Q8WWY7 111 aa5.98□□□□□ -1.45
GPHN-216ENST00000557678 TTC9Q92623 222 aa5.98□□□□□ -1.45
GPHN-216ENST00000557678 SPACA7Q96KW9 195 aa5.98□□□□□ -1.45
GPHN-216ENST00000557678 FNDC3AQ9Y2H6 1198 aaKnown RBP5.98□□□□□ -1.45
GPHN-216ENST00000557678 ATG7O95352 703 aa5.97□□□□□ -1.45
GPHN-216ENST00000557678 SCNN1AP37088 669 aa5.97□□□□□ -1.45
GPHN-216ENST00000557678 FAM69CQ0P6D2 419 aa5.97□□□□□ -1.45
GPHN-216ENST00000557678 IGF2-ASQ6U949 168 aa5.97□□□□□ -1.45
GPHN-216ENST00000557678 PBXIP1Q96AQ6 731 aa5.97□□□□□ -1.45
GPHN-216ENST00000557678 ARID3CA6NKF2 412 aa5.96□□□□□ -1.46
GPHN-216ENST00000557678 H2AFB1P0C5Y9 115 aa5.96□□□□□ -1.46
GPHN-216ENST00000557678 H2AFB2P0C5Z0 115 aa5.96□□□□□ -1.46
GPHN-216ENST00000557678 TRIP4Q15650 581 aaPredicted RBP5.96□□□□□ -1.46
GPHN-216ENST00000557678 COL26A1Q96A83 441 aa5.96□□□□□ -1.46
GPHN-216ENST00000557678 STIM2Q9P246 746 aa5.96□□□□□ -1.46
GPHN-216ENST00000557678 SERPINA10Q9UK55 444 aa5.96□□□□□ -1.46
GPHN-216ENST00000557678 TRIM33Q9UPN9 1127 aa5.96□□□□□ -1.46
GPHN-216ENST00000557678 FAM177BA6PVY3 158 aa5.95□□□□□ -1.46
GPHN-216ENST00000557678 TNFRSF10BO14763 440 aa5.95□□□□□ -1.46
GPHN-216ENST00000557678 DEAF1O75398 565 aaPredicted RBP5.95□□□□□ -1.46
GPHN-216ENST00000557678 ATP2B4P23634 1241 aa5.95□□□□□ -1.46
GPHN-216ENST00000557678 NOS3P29474 1203 aa5.95□□□□□ -1.46
GPHN-216ENST00000557678 CDC25BP30305 580 aa5.95□□□□□ -1.46
GPHN-216ENST00000557678 SOX18P35713 384 aa5.95□□□□□ -1.46
GPHN-216ENST00000557678 HYAL2Q12891 473 aa5.95□□□□□ -1.46
GPHN-216ENST00000557678 FAM26DQ5JW98 314 aa5.95□□□□□ -1.46
GPHN-216ENST00000557678 ABTB2Q8N961 1025 aa5.95□□□□□ -1.46
GPHN-216ENST00000557678 LACRTQ9GZZ8 138 aa5.95□□□□□ -1.46
GPHN-216ENST00000557678 SMNDC1O75940 238 aaKnown RBP eCLIP5.94□□□□□ -1.46
GPHN-216ENST00000557678 ALX3O95076 343 aa5.94□□□□□ -1.46
GPHN-216ENST00000557678 SRPK2P78362 688 aaKnown RBP5.94□□□□□ -1.46
GPHN-216ENST00000557678 CEP135Q66GS9 1140 aa5.94□□□□□ -1.46
GPHN-216ENST00000557678 NBPF11Q86T75 865 aa5.94□□□□□ -1.46
GPHN-216ENST00000557678 TTC16Q8NEE8 873 aa5.94□□□□□ -1.46
GPHN-216ENST00000557678 CLP1Q92989 425 aaKnown RBP5.94□□□□□ -1.46
GPHN-216ENST00000557678 AKTIPQ9H8T0 292 aa5.94□□□□□ -1.46
GPHN-216ENST00000557678 PPME1Q9Y570 386 aa5.94□□□□□ -1.46
GPHN-216ENST00000557678 ZBTB39O15060 712 aa5.93□□□□□ -1.46
GPHN-216ENST00000557678 GLB1P16278 677 aa5.93□□□□□ -1.46
GPHN-216ENST00000557678 ATP11AP98196 1134 aa5.93□□□□□ -1.46
GPHN-216ENST00000557678 OR13H1Q8NG92 308 aa5.93□□□□□ -1.46
GPHN-216ENST00000557678 DCAF11Q8TEB1 546 aa5.93□□□□□ -1.46
GPHN-216ENST00000557678 MEGF10Q96KG7 1140 aa5.93□□□□□ -1.46
GPHN-216ENST00000557678 MRPL18Q9H0U6 180 aaKnown RBP5.93□□□□□ -1.46
GPHN-216ENST00000557678 ZFP64Q9NPA5 681 aa5.93□□□□□ -1.46
GPHN-216ENST00000557678 SEPT3Q9UH03 358 aa5.93□□□□□ -1.46
GPHN-216ENST00000557678 BTBD11A6QL63 1104 aa5.92□□□□□ -1.46
GPHN-216ENST00000557678 LINC01387J3KSC0 135 aa5.92□□□□□ -1.46
GPHN-216ENST00000557678 DLL1O00548 723 aa5.92□□□□□ -1.46
GPHN-216ENST00000557678 TXNDC11Q6PKC3 985 aa5.92□□□□□ -1.46
GPHN-216ENST00000557678 ILDR2Q71H61 639 aa5.92□□□□□ -1.46
GPHN-216ENST00000557678 ZNF438Q7Z4V0 828 aa5.92□□□□□ -1.46
GPHN-216ENST00000557678 ATCAYQ86WG3 371 aa5.92□□□□□ -1.46
GPHN-216ENST00000557678 NCAPG2Q86XI2 1143 aa5.92□□□□□ -1.46
GPHN-216ENST00000557678 NUDT16Q96DE0 195 aaKnown RBP5.92□□□□□ -1.46
GPHN-216ENST00000557678 MUC3BQ9H195 1237 aa5.92□□□□□ -1.46
GPHN-216ENST00000557678 ABI2Q9NYB9 513 aaPredicted RBP5.92□□□□□ -1.46
GPHN-216ENST00000557678 PCSK2P16519 638 aa5.91□□□□□ -1.46
GPHN-216ENST00000557678 DNM1Q05193 864 aaKnown RBP5.91□□□□□ -1.46
GPHN-216ENST00000557678 AAMPQ13685 434 aa5.91□□□□□ -1.46
GPHN-216ENST00000557678 SETDB1Q15047 1291 aa5.91□□□□□ -1.46
GPHN-216ENST00000557678 C8orf34Q49A92 452 aa5.91□□□□□ -1.46
GPHN-216ENST00000557678 ARTNQ5T4W7 220 aa5.91□□□□□ -1.46
GPHN-216ENST00000557678 COL13A1Q5TAT6 717 aaPredicted RBP5.91□□□□□ -1.46
GPHN-216ENST00000557678 FAM117BQ6P1L5 589 aa5.91□□□□□ -1.46
GPHN-216ENST00000557678 MAP4K3Q8IVH8 894 aa5.91□□□□□ -1.46
GPHN-216ENST00000557678 SSBP4Q9BWG4 385 aaPredicted RBP5.91□□□□□ -1.46
GPHN-216ENST00000557678 RASSF4Q9H2L5 321 aa5.91□□□□□ -1.46
GPHN-216ENST00000557678 SRA1Q9HD15 236 aaKnown RBP5.91□□□□□ -1.46
GPHN-216ENST00000557678 CYP2E1P05181 493 aaPredicted RBP5.9□□□□□ -1.46
GPHN-216ENST00000557678 HOXD8P13378 290 aaPredicted RBP5.9□□□□□ -1.46
GPHN-216ENST00000557678 CDC27P30260 824 aa5.9□□□□□ -1.46
GPHN-216ENST00000557678 CACTIN-AS1Q8N1I8 211 aa5.9□□□□□ -1.46
GPHN-216ENST00000557678 AGGF1Q8N302 714 aaeCLIP5.9□□□□□ -1.46
GPHN-216ENST00000557678 CARD10Q9BWT7 1032 aa5.9□□□□□ -1.46
GPHN-216ENST00000557678 ELP3Q9H9T3 547 aa5.9□□□□□ -1.46
GPHN-216ENST00000557678 KANSL3Q9P2N6 904 aa5.9□□□□□ -1.46
GPHN-216ENST00000557678 F8W735 103 aaPredicted RBP5.89□□□□□ -1.47
GPHN-216ENST00000557678 EDEM1Q92611 657 aa5.89□□□□□ -1.47
GPHN-216ENST00000557678 KRTAP4-7Q9BYR0 210 aa5.89□□□□□ -1.47
GPHN-216ENST00000557678 SLAIN2Q9P270 581 aa5.89□□□□□ -1.47
GPHN-216ENST00000557678 RPLP1P05386 114 aaKnown RBP5.88□□□□□ -1.47
GPHN-216ENST00000557678 CD68P34810 354 aaPredicted RBP5.88□□□□□ -1.47
GPHN-216ENST00000557678 CABP4P57796 275 aa5.88□□□□□ -1.47
GPHN-216ENST00000557678 NOM1Q5C9Z4 860 aaKnown RBP5.88□□□□□ -1.47
GPHN-216ENST00000557678 PDE12Q6L8Q7 609 aaKnown RBP5.88□□□□□ -1.47
GPHN-216ENST00000557678 PRR23CQ6ZRP0 262 aa5.88□□□□□ -1.47
GPHN-216ENST00000557678 ACAD11Q709F0 780 aa5.88□□□□□ -1.47
GPHN-216ENST00000557678 TMEM63CQ9P1W3 806 aa5.88□□□□□ -1.47
GPHN-216ENST00000557678 GTF3C3Q9Y5Q9 886 aa5.88□□□□□ -1.47
GPHN-216ENST00000557678 PTPRAP18433 802 aa5.87□□□□□ -1.47
GPHN-216ENST00000557678 CES1P23141 567 aa5.87□□□□□ -1.47
GPHN-216ENST00000557678 LRP8Q14114 963 aa5.87□□□□□ -1.47
GPHN-216ENST00000557678 TMEM130Q8N3G9 435 aa5.87□□□□□ -1.47
GPHN-216ENST00000557678 CCDC82Q8N4S0 544 aa5.87□□□□□ -1.47
GPHN-216ENST00000557678 GALNT11Q8NCW6 608 aa5.87□□□□□ -1.47
GPHN-216ENST00000557678 HELQQ8TDG4 1101 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms