RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 OLFM4Q6UX06 510 aa9.25□□□□□ -0.93
SPTLC2-206ENST00000557566 ZIC5Q96T25 663 aa9.25□□□□□ -0.93
SPTLC2-206ENST00000557566 KCNK17Q96T54 332 aa9.25□□□□□ -0.93
SPTLC2-206ENST00000557566 GLIS2Q9BZE0 524 aaPredicted RBP9.25□□□□□ -0.93
SPTLC2-206ENST00000557566 SLC24A3Q9HC58 644 aa9.25□□□□□ -0.93
SPTLC2-206ENST00000557566 ADARB2Q9NS39 739 aaKnown RBP9.25□□□□□ -0.93
SPTLC2-206ENST00000557566 TBC1D2BQ9UPU7 963 aa9.25□□□□□ -0.93
SPTLC2-206ENST00000557566 HPS5Q9UPZ3 1129 aa9.25□□□□□ -0.93
SPTLC2-206ENST00000557566 ZNF330Q9Y3S2 320 aaPredicted RBP9.25□□□□□ -0.93
SPTLC2-206ENST00000557566 TRPA1O75762 1119 aa9.24□□□□□ -0.93
SPTLC2-206ENST00000557566 ALDH1B1P30837 517 aa9.24□□□□□ -0.93
SPTLC2-206ENST00000557566 FXR1P51114 621 aaKnown RBP eCLIP9.24□□□□□ -0.93
SPTLC2-206ENST00000557566 HUNKP57058 714 aa9.24□□□□□ -0.93
SPTLC2-206ENST00000557566 PKN2Q16513 984 aaKnown RBP9.24□□□□□ -0.93
SPTLC2-206ENST00000557566 NBPF5PQ86XG9 351 aaPredicted RBP9.24□□□□□ -0.93
SPTLC2-206ENST00000557566 CARD14Q9BXL6 1004 aa9.24□□□□□ -0.93
SPTLC2-206ENST00000557566 ADAM33Q9BZ11 813 aa9.24□□□□□ -0.93
SPTLC2-206ENST00000557566 SZT2Q5T011 3432 aa9.24□□□□□ -0.93
SPTLC2-206ENST00000557566 COL4A5P29400 1685 aa9.23□□□□□ -0.93
SPTLC2-206ENST00000557566 KLRG2A4D1S0 409 aaPredicted RBP9.23□□□□□ -0.93
SPTLC2-206ENST00000557566 PTPREP23469 700 aa9.23□□□□□ -0.93
SPTLC2-206ENST00000557566 IL6STP40189 918 aaPredicted RBP9.23□□□□□ -0.93
SPTLC2-206ENST00000557566 AEBP1Q8IUX7 1158 aa9.23□□□□□ -0.93
SPTLC2-206ENST00000557566 RNF186Q9NXI6 227 aa9.23□□□□□ -0.93
SPTLC2-206ENST00000557566 GPRC5DQ9NZD1 345 aa9.23□□□□□ -0.93
SPTLC2-206ENST00000557566 CUL9Q8IWT3 2517 aa9.23□□□□□ -0.93
SPTLC2-206ENST00000557566 DLL1O00548 723 aa9.22□□□□□ -0.93
SPTLC2-206ENST00000557566 CAMTA2O94983 1202 aa9.22□□□□□ -0.93
SPTLC2-206ENST00000557566 TNNT2P45379 298 aaPredicted RBP9.22□□□□□ -0.93
SPTLC2-206ENST00000557566 CC2D2BQ6DHV5 1058 aa9.22□□□□□ -0.93
SPTLC2-206ENST00000557566 CDC37L1Q7L3B6 337 aa9.22□□□□□ -0.93
SPTLC2-206ENST00000557566 TTC5Q8N0Z6 440 aa9.22□□□□□ -0.93
SPTLC2-206ENST00000557566 LARGE2Q8N3Y3 721 aa9.22□□□□□ -0.93
SPTLC2-206ENST00000557566 CCDC102AQ96A19 550 aa9.22□□□□□ -0.93
SPTLC2-206ENST00000557566 LGR6Q9HBX8 967 aa9.22□□□□□ -0.93
SPTLC2-206ENST00000557566 SNED1Q8TER0 1413 aa9.22□□□□□ -0.93
SPTLC2-206ENST00000557566 RNMTO43148 476 aaKnown RBP9.21□□□□□ -0.94
SPTLC2-206ENST00000557566 KIF23Q02241 960 aaPredicted RBP9.21□□□□□ -0.94
SPTLC2-206ENST00000557566 GRIPAP1Q4V328 841 aa9.21□□□□□ -0.94
SPTLC2-206ENST00000557566 RGMBQ6NW40 437 aa9.21□□□□□ -0.94
SPTLC2-206ENST00000557566 NIM1KQ8IY84 436 aa9.21□□□□□ -0.94
SPTLC2-206ENST00000557566 TEX13AQ9BXU3 409 aaPredicted RBP9.21□□□□□ -0.94
SPTLC2-206ENST00000557566 PGAP2Q9UHJ9 254 aa9.21□□□□□ -0.94
SPTLC2-206ENST00000557566 FAM155AB1AL88 458 aaPredicted RBP9.2□□□□□ -0.94
SPTLC2-206ENST00000557566 PSEN2P49810 448 aa9.2□□□□□ -0.94
SPTLC2-206ENST00000557566 TSR1Q2NL82 804 aaKnown RBP9.2□□□□□ -0.94
SPTLC2-206ENST00000557566 SULT6B1Q6IMI4 303 aa9.2□□□□□ -0.94
SPTLC2-206ENST00000557566 TPTE2Q6XPS3 522 aa9.2□□□□□ -0.94
SPTLC2-206ENST00000557566 DZIP3Q86Y13 1208 aaKnown RBP9.2□□□□□ -0.94
SPTLC2-206ENST00000557566 HDAC9Q9UKV0 1011 aa9.2□□□□□ -0.94
SPTLC2-206ENST00000557566 ZNF652Q9Y2D9 606 aa9.2□□□□□ -0.94
SPTLC2-206ENST00000557566 CENPFP49454 3210 aa9.2□□□□□ -0.94
SPTLC2-206ENST00000557566 ZNF157P51786 506 aaPredicted RBP9.19□□□□□ -0.94
SPTLC2-206ENST00000557566 HIC1Q14526 733 aa9.19□□□□□ -0.94
SPTLC2-206ENST00000557566 CLEC4GQ6UXB4 293 aa9.19□□□□□ -0.94
SPTLC2-206ENST00000557566 HCSTQ9UBK5 93 aa9.19□□□□□ -0.94
SPTLC2-206ENST00000557566 CDHR2Q9BYE9 1310 aa9.19□□□□□ -0.94
SPTLC2-206ENST00000557566 HEG1Q9ULI3 1381 aa9.19□□□□□ -0.94
SPTLC2-206ENST00000557566 ARHGAP33O14559 1287 aa9.18□□□□□ -0.94
SPTLC2-206ENST00000557566 POLR2AP24928 1970 aaKnown RBP9.18□□□□□ -0.94
SPTLC2-206ENST00000557566 PBX2P40425 430 aa9.18□□□□□ -0.94
SPTLC2-206ENST00000557566 HTTP42858 3142 aa9.18□□□□□ -0.94
SPTLC2-206ENST00000557566 GMPSP49915 693 aaPredicted RBP9.18□□□□□ -0.94
SPTLC2-206ENST00000557566 PTGDRQ13258 359 aa9.18□□□□□ -0.94
SPTLC2-206ENST00000557566 C6orf132Q5T0Z8 1188 aa9.18□□□□□ -0.94
SPTLC2-206ENST00000557566 C2orf69Q8N8R5 385 aa9.18□□□□□ -0.94
SPTLC2-206ENST00000557566 TRIOBPQ9H2D6 2365 aa9.18□□□□□ -0.94
SPTLC2-206ENST00000557566 GBA2Q9HCG7 927 aaPredicted RBP9.18□□□□□ -0.94
SPTLC2-206ENST00000557566 NPC1L1Q9UHC9 1359 aa9.18□□□□□ -0.94
SPTLC2-206ENST00000557566 CEP290O15078 2479 aa9.17□□□□□ -0.94
SPTLC2-206ENST00000557566 BRCA2P51587 3418 aa9.17□□□□□ -0.94
SPTLC2-206ENST00000557566 COL6A3P12111 3177 aa9.17□□□□□ -0.94
SPTLC2-206ENST00000557566 PPIP5K2O43314 1243 aa9.17□□□□□ -0.94
SPTLC2-206ENST00000557566 GTF2E1P29083 439 aaPredicted RBP9.17□□□□□ -0.94
SPTLC2-206ENST00000557566 FBXO46Q6PJ61 603 aaPredicted RBP9.17□□□□□ -0.94
SPTLC2-206ENST00000557566 USP48Q86UV5 1035 aa9.17□□□□□ -0.94
SPTLC2-206ENST00000557566 KRI1Q8N9T8 703 aaKnown RBP9.17□□□□□ -0.94
SPTLC2-206ENST00000557566 ZNF496Q96IT1 587 aaPredicted RBP9.17□□□□□ -0.94
SPTLC2-206ENST00000557566 CSRNP1Q96S65 589 aa9.17□□□□□ -0.94
SPTLC2-206ENST00000557566 BCL2L13Q9BXK5 485 aa9.17□□□□□ -0.94
SPTLC2-206ENST00000557566 CDHR5Q9HBB8 845 aa9.17□□□□□ -0.94
SPTLC2-206ENST00000557566 A1BGP04217 495 aa9.16□□□□□ -0.94
SPTLC2-206ENST00000557566 SLC10A3P09131 477 aa9.16□□□□□ -0.94
SPTLC2-206ENST00000557566 HIRAP54198 1017 aaPredicted RBP9.16□□□□□ -0.94
SPTLC2-206ENST00000557566 CXCL9Q07325 125 aa9.16□□□□□ -0.94
SPTLC2-206ENST00000557566 MAP2K5Q13163 448 aa9.16□□□□□ -0.94
SPTLC2-206ENST00000557566 TMEM132AQ24JP5 1023 aa9.16□□□□□ -0.94
SPTLC2-206ENST00000557566 SLC17A8Q8NDX2 589 aa9.16□□□□□ -0.94
SPTLC2-206ENST00000557566 VPS33BQ9H267 617 aa9.16□□□□□ -0.94
SPTLC2-206ENST00000557566 NIP7Q9Y221 180 aaKnown RBP eCLIP9.16□□□□□ -0.94
SPTLC2-206ENST00000557566 RBBP6Q7Z6E9 1792 aaKnown RBP9.16□□□□□ -0.94
SPTLC2-206ENST00000557566 KIAA0100Q14667 2235 aaKnown RBP9.15□□□□□ -0.94
SPTLC2-206ENST00000557566 FAM177BA6PVY3 158 aa9.15□□□□□ -0.94
SPTLC2-206ENST00000557566 AOC3Q16853 763 aa9.15□□□□□ -0.94
SPTLC2-206ENST00000557566 CRY2Q49AN0 593 aa9.15□□□□□ -0.94
SPTLC2-206ENST00000557566 ZNF790Q6PG37 636 aa9.15□□□□□ -0.94
SPTLC2-206ENST00000557566 TRPM4Q8TD43 1214 aa9.15□□□□□ -0.94
SPTLC2-206ENST00000557566 ZNF296Q8WUU4 475 aaPredicted RBP9.15□□□□□ -0.94
SPTLC2-206ENST00000557566 RPGRQ92834 1020 aaKnown RBP9.15□□□□□ -0.94
SPTLC2-206ENST00000557566 TMX4Q9H1E5 349 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms