RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 HDGFL1Q5TGJ6 251 aa13.28□□□□□ -0.28
RDH11-210ENST00000557331 CTU1Q7Z7A3 348 aaKnown RBP13.28□□□□□ -0.28
RDH11-210ENST00000557331 TBC1D16Q8TBP0 767 aa13.28□□□□□ -0.28
RDH11-210ENST00000557331 CELF1Q92879 486 aaKnown RBP13.28□□□□□ -0.28
RDH11-210ENST00000557331 FAM89AQ96GI7 184 aa13.28□□□□□ -0.28
RDH11-210ENST00000557331 AKAP11Q9UKA4 1901 aa13.28□□□□□ -0.28
RDH11-210ENST00000557331 POLR2AP24928 1970 aaKnown RBP13.28□□□□□ -0.28
RDH11-210ENST00000557331 PITPNM2Q9BZ72 1349 aa13.28□□□□□ -0.28
RDH11-210ENST00000557331 TNRC18O15417 2968 aaPredicted RBP13.28□□□□□ -0.28
RDH11-210ENST00000557331 IRS4O14654 1257 aaPredicted RBP13.27□□□□□ -0.29
RDH11-210ENST00000557331 ZNF280AP59817 542 aaPredicted RBP13.27□□□□□ -0.29
RDH11-210ENST00000557331 GPSM2P81274 684 aa13.27□□□□□ -0.29
RDH11-210ENST00000557331 CCDC152Q4G0S7 254 aa13.27□□□□□ -0.29
RDH11-210ENST00000557331 NOM1Q5C9Z4 860 aaKnown RBP13.27□□□□□ -0.29
RDH11-210ENST00000557331 RBM26Q5T8P6 1007 aaKnown RBP13.27□□□□□ -0.29
RDH11-210ENST00000557331 PODNQ7Z5L7 613 aa13.27□□□□□ -0.29
RDH11-210ENST00000557331 SLC51AQ86UW1 340 aa13.27□□□□□ -0.29
RDH11-210ENST00000557331 ZBTB38Q8NAP3 1195 aaPredicted RBP13.27□□□□□ -0.29
RDH11-210ENST00000557331 CSRNP1Q96S65 589 aa13.27□□□□□ -0.29
RDH11-210ENST00000557331 CHPF2Q9P2E5 772 aa13.27□□□□□ -0.29
RDH11-210ENST00000557331 ANKIB1Q9P2G1 1089 aa13.27□□□□□ -0.29
RDH11-210ENST00000557331 GGA1Q9UJY5 639 aa13.27□□□□□ -0.29
RDH11-210ENST00000557331 LRRC37AA6NMS7 1700 aa13.27□□□□□ -0.29
RDH11-210ENST00000557331 LAMB2P55268 1798 aa13.27□□□□□ -0.29
RDH11-210ENST00000557331 ZIC5Q96T25 663 aa13.26□□□□□ -0.29
RDH11-210ENST00000557331 GGA3Q9NZ52 723 aa13.26□□□□□ -0.29
RDH11-210ENST00000557331 DUOX1Q9NRD9 1551 aa13.25□□□□□ -0.29
RDH11-210ENST00000557331 SHTN1A0MZ66 631 aa13.25□□□□□ -0.29
RDH11-210ENST00000557331 USP17L8P0C7I0 530 aa13.25□□□□□ -0.29
RDH11-210ENST00000557331 GOLGA2Q08379 1002 aa13.25□□□□□ -0.29
RDH11-210ENST00000557331 DOK7Q18PE1 504 aa13.25□□□□□ -0.29
RDH11-210ENST00000557331 RSBN1LQ6PCB5 846 aaPredicted RBP13.25□□□□□ -0.29
RDH11-210ENST00000557331 CCDC191Q8NCU4 936 aa13.25□□□□□ -0.29
RDH11-210ENST00000557331 CDCA5Q96FF9 252 aa13.25□□□□□ -0.29
RDH11-210ENST00000557331 DDX60Q8IY21 1712 aaKnown RBP13.25□□□□□ -0.29
RDH11-210ENST00000557331 RTL9Q8NET4 1388 aa13.24□□□□□ -0.29
RDH11-210ENST00000557331 ADM5C9JUS6 153 aa13.24□□□□□ -0.29
RDH11-210ENST00000557331 UFL1O94874 794 aa13.24□□□□□ -0.29
RDH11-210ENST00000557331 NF2P35240 595 aa13.24□□□□□ -0.29
RDH11-210ENST00000557331 CALD1Q05682 793 aaKnown RBP13.24□□□□□ -0.29
RDH11-210ENST00000557331 SCARF1Q14162 830 aa13.24□□□□□ -0.29
RDH11-210ENST00000557331 PRPF38BQ5VTL8 546 aaKnown RBP13.24□□□□□ -0.29
RDH11-210ENST00000557331 RIC3Q7Z5B4 369 aa13.24□□□□□ -0.29
RDH11-210ENST00000557331 OGFOD1Q8N543 542 aa13.24□□□□□ -0.29
RDH11-210ENST00000557331 RUNDC1Q96C34 613 aa13.24□□□□□ -0.29
RDH11-210ENST00000557331 XDHP47989 1333 aa13.23□□□□□ -0.29
RDH11-210ENST00000557331 MYO3BQ8WXR4 1341 aa13.23□□□□□ -0.29
RDH11-210ENST00000557331 USP17L3A6NCW0 530 aa13.23□□□□□ -0.29
RDH11-210ENST00000557331 USP17L4A6NCW7 530 aa13.23□□□□□ -0.29
RDH11-210ENST00000557331 ATP5J2-PTCD1G3V325 749 aa13.23□□□□□ -0.29
RDH11-210ENST00000557331 EGFRP00533 1210 aa13.23□□□□□ -0.29
RDH11-210ENST00000557331 ATP2B4P23634 1241 aa13.23□□□□□ -0.29
RDH11-210ENST00000557331 USP17L1Q7RTZ2 530 aa13.23□□□□□ -0.29
RDH11-210ENST00000557331 MYOZ2Q9NPC6 264 aa13.23□□□□□ -0.29
RDH11-210ENST00000557331 HDAC9Q9UKV0 1011 aa13.23□□□□□ -0.29
RDH11-210ENST00000557331 LAS1LQ9Y4W2 734 aaKnown RBP13.23□□□□□ -0.29
RDH11-210ENST00000557331 PDE8AO60658 829 aa13.22□□□□□ -0.29
RDH11-210ENST00000557331 DDX58O95786 925 aaKnown RBP13.22□□□□□ -0.29
RDH11-210ENST00000557331 PCCAP05165 728 aaPredicted RBP13.22□□□□□ -0.29
RDH11-210ENST00000557331 ANGEL2Q5VTE6 544 aaKnown RBP13.22□□□□□ -0.29
RDH11-210ENST00000557331 RASAL3Q86YV0 1011 aa13.22□□□□□ -0.29
RDH11-210ENST00000557331 ANKRD18AQ8IVF6 992 aa13.22□□□□□ -0.29
RDH11-210ENST00000557331 CDC5LQ99459 802 aaKnown RBP13.22□□□□□ -0.29
RDH11-210ENST00000557331 KCNQ5Q9NR82 932 aa13.22□□□□□ -0.29
RDH11-210ENST00000557331 TM4SF4P48230 202 aa13.21□□□□□ -0.29
RDH11-210ENST00000557331 SREBF2Q12772 1141 aa13.21□□□□□ -0.29
RDH11-210ENST00000557331 WDR43Q15061 677 aaKnown RBP eCLIP13.21□□□□□ -0.29
RDH11-210ENST00000557331 NEUROD2Q15784 382 aa13.21□□□□□ -0.29
RDH11-210ENST00000557331 DUSP27Q5VZP5 1158 aa13.21□□□□□ -0.29
RDH11-210ENST00000557331 GCC1Q96CN9 775 aa13.21□□□□□ -0.29
RDH11-210ENST00000557331 GMLQ99445 158 aa13.21□□□□□ -0.29
RDH11-210ENST00000557331 CWC25Q9NXE8 425 aaPredicted RBP13.21□□□□□ -0.29
RDH11-210ENST00000557331 TAF1P21675 1872 aa13.21□□□□□ -0.3
RDH11-210ENST00000557331 ALDH1A1P00352 501 aa13.2□□□□□ -0.3
RDH11-210ENST00000557331 INHBEP58166 350 aa13.2□□□□□ -0.3
RDH11-210ENST00000557331 CFHR5Q9BXR6 569 aa13.2□□□□□ -0.3
RDH11-210ENST00000557331 TRIM35Q9UPQ4 493 aa13.2□□□□□ -0.3
RDH11-210ENST00000557331 PAPPA2Q9BXP8 1791 aa13.2□□□□□ -0.3
RDH11-210ENST00000557331 UNCXA6NJT0 531 aa13.19□□□□□ -0.3
RDH11-210ENST00000557331 SOX10P56693 466 aa13.19□□□□□ -0.3
RDH11-210ENST00000557331 GNAI1P63096 354 aa13.19□□□□□ -0.3
RDH11-210ENST00000557331 RTL5Q5HYW3 569 aaPredicted RBP13.19□□□□□ -0.3
RDH11-210ENST00000557331 DLK2Q6UY11 383 aa13.19□□□□□ -0.3
RDH11-210ENST00000557331 ARMC9Q7Z3E5 817 aa13.19□□□□□ -0.3
RDH11-210ENST00000557331 HPS5Q9UPZ3 1129 aa13.19□□□□□ -0.3
RDH11-210ENST00000557331 MYBBP1AQ9BQG0 1328 aaKnown RBP13.18□□□□□ -0.3
RDH11-210ENST00000557331 TTLL12Q14166 644 aaPredicted RBP13.18□□□□□ -0.3
RDH11-210ENST00000557331 KRT24Q2M2I5 525 aa13.18□□□□□ -0.3
RDH11-210ENST00000557331 STRIP1Q5VSL9 837 aa13.18□□□□□ -0.3
RDH11-210ENST00000557331 FBXO46Q6PJ61 603 aaPredicted RBP13.18□□□□□ -0.3
RDH11-210ENST00000557331 SEC31BQ9NQW1 1179 aa13.18□□□□□ -0.3
RDH11-210ENST00000557331 BSDC1Q9NW68 430 aaPredicted RBP13.18□□□□□ -0.3
RDH11-210ENST00000557331 IFT57Q9NWB7 429 aa13.18□□□□□ -0.3
RDH11-210ENST00000557331 MED23Q9ULK4 1368 aa13.18□□□□□ -0.3
RDH11-210ENST00000557331 CCDC30Q5VVM6 783 aa13.17□□□□□ -0.3
RDH11-210ENST00000557331 INTS3Q68E01 1043 aaKnown RBP13.17□□□□□ -0.3
RDH11-210ENST00000557331 APOBEC3FQ8IUX4 373 aaKnown RBP13.17□□□□□ -0.3
RDH11-210ENST00000557331 ZNF296Q8WUU4 475 aaPredicted RBP13.17□□□□□ -0.3
RDH11-210ENST00000557331 METTL22Q9BUU2 404 aaPredicted RBP13.17□□□□□ -0.3
RDH11-210ENST00000557331 COA1Q9GZY4 146 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms