RNA–Protein interactions for RNA: ENST00000557294.5

PRKCH-223, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-223ENST00000557294 DLG5Q8TDM6 1919 aa24.13■■□□□ 1.45
PRKCH-223ENST00000557294 ASTN2O75129 1339 aaPredicted RBP24.12■■□□□ 1.45
PRKCH-223ENST00000557294 TBC1D16Q8TBP0 767 aa24.12■■□□□ 1.45
PRKCH-223ENST00000557294 PNNQ9H307 717 aaKnown RBP24.12■■□□□ 1.45
PRKCH-223ENST00000557294 LRRC37AA6NMS7 1700 aa24.11■■□□□ 1.45
PRKCH-223ENST00000557294 SCARF1Q14162 830 aa24.11■■□□□ 1.45
PRKCH-223ENST00000557294 ZNF296Q8WUU4 475 aaPredicted RBP24.11■■□□□ 1.45
PRKCH-223ENST00000557294 ZC3H12CQ9C0D7 883 aaKnown RBP24.11■■□□□ 1.45
PRKCH-223ENST00000557294 TAF1P21675 1872 aa24.11■■□□□ 1.45
PRKCH-223ENST00000557294 ZNF280AP59817 542 aaPredicted RBP24.1■■□□□ 1.45
PRKCH-223ENST00000557294 ANGEL2Q5VTE6 544 aaKnown RBP24.1■■□□□ 1.45
PRKCH-223ENST00000557294 NECTIN2Q92692 538 aa24.09■■□□□ 1.45
PRKCH-223ENST00000557294 GCC1Q96CN9 775 aa24.09■■□□□ 1.45
PRKCH-223ENST00000557294 FAM89AQ96GI7 184 aa24.09■■□□□ 1.45
PRKCH-223ENST00000557294 TBC1D8O95759 1140 aa24.08■■□□□ 1.45
PRKCH-223ENST00000557294 RPS8P62241 208 aaKnown RBP24.08■■□□□ 1.45
PRKCH-223ENST00000557294 NOM1Q5C9Z4 860 aaKnown RBP24.08■■□□□ 1.45
PRKCH-223ENST00000557294 AGBL3Q8NEM8 1001 aa24.08■■□□□ 1.45
PRKCH-223ENST00000557294 MAPK8IP3Q9UPT6 1336 aa24.08■■□□□ 1.44
PRKCH-223ENST00000557294 TM4SF4P48230 202 aa24.07■■□□□ 1.44
PRKCH-223ENST00000557294 ZNF428Q96B54 188 aa24.07■■□□□ 1.44
PRKCH-223ENST00000557294 PODXL2Q9NZ53 605 aa24.07■■□□□ 1.44
PRKCH-223ENST00000557294 ISCA1Q9BUE6 129 aa24.06■■□□□ 1.44
PRKCH-223ENST00000557294 G3V3G9 751 aa24.05■■□□□ 1.44
PRKCH-223ENST00000557294 DCAF8Q5TAQ9 597 aa24.05■■□□□ 1.44
PRKCH-223ENST00000557294 RSBN1LQ6PCB5 846 aaPredicted RBP24.05■■□□□ 1.44
PRKCH-223ENST00000557294 FBXO46Q6PJ61 603 aaPredicted RBP24.05■■□□□ 1.44
PRKCH-223ENST00000557294 ANKRD13DQ6ZTN6 518 aa24.05■■□□□ 1.44
PRKCH-223ENST00000557294 PLBD2Q8NHP8 589 aa24.05■■□□□ 1.44
PRKCH-223ENST00000557294 PITPNM2Q9BZ72 1349 aa24.05■■□□□ 1.44
PRKCH-223ENST00000557294 GPR25O00155 361 aa24.04■■□□□ 1.44
PRKCH-223ENST00000557294 RIPK4P57078 832 aa24.04■■□□□ 1.44
PRKCH-223ENST00000557294 UBE2Q2LH0YL09 131 aa24.03■■□□□ 1.44
PRKCH-223ENST00000557294 MOB2Q70IA6 237 aa24.03■■□□□ 1.44
PRKCH-223ENST00000557294 GMLQ99445 158 aa24.03■■□□□ 1.44
PRKCH-223ENST00000557294 ZNF609O15014 1411 aa24.02■■□□□ 1.44
PRKCH-223ENST00000557294 USP17L8P0C7I0 530 aa24.02■■□□□ 1.44
PRKCH-223ENST00000557294 MYOZ2Q9NPC6 264 aa24.02■■□□□ 1.44
PRKCH-223ENST00000557294 ATP5J2-PTCD1G3V325 749 aa24.01■■□□□ 1.43
PRKCH-223ENST00000557294 TRIM28Q13263 835 aaKnown RBP24.01■■□□□ 1.43
PRKCH-223ENST00000557294 ANKIB1Q9P2G1 1089 aa24.01■■□□□ 1.43
PRKCH-223ENST00000557294 IRS4O14654 1257 aaPredicted RBP24■■□□□ 1.43
PRKCH-223ENST00000557294 UFL1O94874 794 aa24■■□□□ 1.43
PRKCH-223ENST00000557294 CFHR5Q9BXR6 569 aa24■■□□□ 1.43
PRKCH-223ENST00000557294 GGA1Q9UJY5 639 aa24■■□□□ 1.43
PRKCH-223ENST00000557294 DDX60Q8IY21 1712 aaKnown RBP24■■□□□ 1.43
PRKCH-223ENST00000557294 PAPPA2Q9BXP8 1791 aa24■■□□□ 1.43
PRKCH-223ENST00000557294 RTL5Q5HYW3 569 aaPredicted RBP23.99■■□□□ 1.43
PRKCH-223ENST00000557294 CHPF2Q9P2E5 772 aa23.99■■□□□ 1.43
PRKCH-223ENST00000557294 SCN9AQ15858 1988 aa23.99■■□□□ 1.43
PRKCH-223ENST00000557294 COL4A1P02462 1669 aa23.99■■□□□ 1.43
PRKCH-223ENST00000557294 FKTNO75072 461 aa23.98■■□□□ 1.43
PRKCH-223ENST00000557294 HABP4Q5JVS0 413 aaKnown RBP23.98■■□□□ 1.43
PRKCH-223ENST00000557294 PRAMEF18Q5VWM3 479 aa23.97■■□□□ 1.43
PRKCH-223ENST00000557294 PODNQ7Z5L7 613 aa23.97■■□□□ 1.43
PRKCH-223ENST00000557294 SEC31BQ9NQW1 1179 aa23.97■■□□□ 1.43
PRKCH-223ENST00000557294 SCAF8Q9UPN6 1271 aaKnown RBP23.97■■□□□ 1.43
PRKCH-223ENST00000557294 USP17L3A6NCW0 530 aa23.96■■□□□ 1.43
PRKCH-223ENST00000557294 USP17L4A6NCW7 530 aa23.96■■□□□ 1.43
PRKCH-223ENST00000557294 CHL1O00533 1208 aa23.96■■□□□ 1.43
PRKCH-223ENST00000557294 LMOD3Q0VAK6 560 aa23.96■■□□□ 1.43
PRKCH-223ENST00000557294 SREBF2Q12772 1141 aa23.96■■□□□ 1.43
PRKCH-223ENST00000557294 TTLL12Q14166 644 aaPredicted RBP23.96■■□□□ 1.43
PRKCH-223ENST00000557294 KRT24Q2M2I5 525 aa23.96■■□□□ 1.43
PRKCH-223ENST00000557294 USP17L1Q7RTZ2 530 aa23.96■■□□□ 1.43
PRKCH-223ENST00000557294 DBF4Q9UBU7 674 aaPredicted RBP23.96■■□□□ 1.43
PRKCH-223ENST00000557294 HSP90B1P14625 803 aaKnown RBP23.95■■□□□ 1.42
PRKCH-223ENST00000557294 NBPF9Q3BBW0 867 aa23.95■■□□□ 1.42
PRKCH-223ENST00000557294 TMPOP42166 694 aaKnown RBP23.94■■□□□ 1.42
PRKCH-223ENST00000557294 HDGFL1Q5TGJ6 251 aa23.94■■□□□ 1.42
PRKCH-223ENST00000557294 ZBTB38Q8NAP3 1195 aaPredicted RBP23.94■■□□□ 1.42
PRKCH-223ENST00000557294 R3HDMLQ9H3Y0 253 aa23.94■■□□□ 1.42
PRKCH-223ENST00000557294 NF2P35240 595 aa23.93■■□□□ 1.42
PRKCH-223ENST00000557294 MKRN3Q13064 507 aaKnown RBP23.93■■□□□ 1.42
PRKCH-223ENST00000557294 INTS3Q68E01 1043 aaKnown RBP23.93■■□□□ 1.42
PRKCH-223ENST00000557294 HOXB7P09629 217 aa23.92■■□□□ 1.42
PRKCH-223ENST00000557294 HYPKQ9NX55 129 aa23.92■■□□□ 1.42
PRKCH-223ENST00000557294 ALDH1A1P00352 501 aa23.91■■□□□ 1.42
PRKCH-223ENST00000557294 PTPN12Q05209 780 aaKnown RBP23.91■■□□□ 1.42
PRKCH-223ENST00000557294 MKI67P46013 3256 aaKnown RBP23.9■■□□□ 1.42
PRKCH-223ENST00000557294 XDHP47989 1333 aa23.9■■□□□ 1.42
PRKCH-223ENST00000557294 ATP2B4P23634 1241 aa23.9■■□□□ 1.42
PRKCH-223ENST00000557294 CCDC152Q4G0S7 254 aa23.9■■□□□ 1.42
PRKCH-223ENST00000557294 OGFOD1Q8N543 542 aa23.9■■□□□ 1.42
PRKCH-223ENST00000557294 WNT10BO00744 389 aa23.89■■□□□ 1.41
PRKCH-223ENST00000557294 ARMC9Q7Z3E5 817 aa23.89■■□□□ 1.41
PRKCH-223ENST00000557294 MMP14P50281 582 aa23.88■■□□□ 1.41
PRKCH-223ENST00000557294 INHBEP58166 350 aa23.88■■□□□ 1.41
PRKCH-223ENST00000557294 LDLRAD1Q5T700 205 aa23.88■■□□□ 1.41
PRKCH-223ENST00000557294 SPRYD7Q5W111 196 aa23.88■■□□□ 1.41
PRKCH-223ENST00000557294 POTEFA5A3E0 1075 aa23.87■■□□□ 1.41
PRKCH-223ENST00000557294 PDE8AO60658 829 aa23.87■■□□□ 1.41
PRKCH-223ENST00000557294 DACT2Q5SW24 774 aa23.87■■□□□ 1.41
PRKCH-223ENST00000557294 RIC3Q7Z5B4 369 aa23.87■■□□□ 1.41
PRKCH-223ENST00000557294 LAS1LQ9Y4W2 734 aaKnown RBP23.87■■□□□ 1.41
PRKCH-223ENST00000557294 TRIM17Q9Y577 477 aa23.87■■□□□ 1.41
PRKCH-223ENST00000557294 ANKRD18AQ8IVF6 992 aa23.86■■□□□ 1.41
PRKCH-223ENST00000557294 PSME4Q14997 1843 aa23.85■■□□□ 1.41
PRKCH-223ENST00000557294 PCCAP05165 728 aaPredicted RBP23.85■■□□□ 1.41
PRKCH-223ENST00000557294 OTOP1Q7RTM1 612 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms