RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 CASP7P55210 303 aa21.02■□□□□ 0.96
VSX1-207ENST00000557285 DCAF8Q5TAQ9 597 aa21.02■□□□□ 0.96
VSX1-207ENST00000557285 MAP1SQ66K74 1059 aaPredicted RBP21.02■□□□□ 0.96
VSX1-207ENST00000557285 DIEXFQ68CQ4 756 aaKnown RBP21.02■□□□□ 0.96
VSX1-207ENST00000557285 CHMP3Q9Y3E7 222 aa21.02■□□□□ 0.96
VSX1-207ENST00000557285 ECE2O60344 883 aa21.01■□□□□ 0.95
VSX1-207ENST00000557285 TNIP1Q15025 636 aa21.01■□□□□ 0.95
VSX1-207ENST00000557285 MIER1Q8N108 512 aa21.01■□□□□ 0.95
VSX1-207ENST00000557285 DNAJC5GQ8N7S2 189 aa21.01■□□□□ 0.95
VSX1-207ENST00000557285 ZC3H12CQ9C0D7 883 aaKnown RBP21.01■□□□□ 0.95
VSX1-207ENST00000557285 ADAMTSL1Q8N6G6 1762 aa21■□□□□ 0.95
VSX1-207ENST00000557285 ITGA6P23229 1130 aa21■□□□□ 0.95
VSX1-207ENST00000557285 MRPL50Q8N5N7 158 aaKnown RBP21■□□□□ 0.95
VSX1-207ENST00000557285 PODXL2Q9NZ53 605 aa21■□□□□ 0.95
VSX1-207ENST00000557285 GPRC5DQ9NZD1 345 aa21■□□□□ 0.95
VSX1-207ENST00000557285 IGHMBP2P38935 993 aaKnown RBP20.99■□□□□ 0.95
VSX1-207ENST00000557285 SSH1Q8WYL5 1049 aa20.99■□□□□ 0.95
VSX1-207ENST00000557285 PLA2G12BQ9BX93 195 aa20.99■□□□□ 0.95
VSX1-207ENST00000557285 KCNQ5Q9NR82 932 aa20.99■□□□□ 0.95
VSX1-207ENST00000557285 C9orf78Q9NZ63 289 aaPredicted RBP20.99■□□□□ 0.95
VSX1-207ENST00000557285 ZBTB12Q9Y330 459 aaPredicted RBP20.99■□□□□ 0.95
VSX1-207ENST00000557285 XDHP47989 1333 aa20.99■□□□□ 0.95
VSX1-207ENST00000557285 RTL9Q8NET4 1388 aa20.98■□□□□ 0.95
VSX1-207ENST00000557285 SHTN1A0MZ66 631 aa20.98■□□□□ 0.95
VSX1-207ENST00000557285 WTIPA6NIX2 430 aaPredicted RBP20.98■□□□□ 0.95
VSX1-207ENST00000557285 PSMD14O00487 310 aa20.98■□□□□ 0.95
VSX1-207ENST00000557285 SRCIN1Q9C0H9 1055 aa20.98■□□□□ 0.95
VSX1-207ENST00000557285 GRM8O00222 908 aa20.97■□□□□ 0.95
VSX1-207ENST00000557285 CNTROBQ8N137 903 aa20.97■□□□□ 0.95
VSX1-207ENST00000557285 KLRG1Q96E93 195 aa20.97■□□□□ 0.95
VSX1-207ENST00000557285 MPHOSPH8Q99549 860 aa20.97■□□□□ 0.95
VSX1-207ENST00000557285 BSDC1Q9NW68 430 aaPredicted RBP20.97■□□□□ 0.95
VSX1-207ENST00000557285 MINPP1Q9UNW1 487 aa20.97■□□□□ 0.95
VSX1-207ENST00000557285 SCN9AQ15858 1988 aa20.96■□□□□ 0.95
VSX1-207ENST00000557285 ATP2B4P23634 1241 aa20.96■□□□□ 0.95
VSX1-207ENST00000557285 USP50Q70EL3 339 aaPredicted RBP20.96■□□□□ 0.95
VSX1-207ENST00000557285 ADARB2Q9NS39 739 aaKnown RBP20.96■□□□□ 0.95
VSX1-207ENST00000557285 ANKRD18BA2A2Z9 1011 aa20.95■□□□□ 0.94
VSX1-207ENST00000557285 ITGBL1O95965 494 aaPredicted RBP20.95■□□□□ 0.94
VSX1-207ENST00000557285 CSF1RP07333 972 aa20.95■□□□□ 0.94
VSX1-207ENST00000557285 FOXO4P98177 505 aa20.95■□□□□ 0.94
VSX1-207ENST00000557285 EPHA10Q5JZY3 1008 aa20.95■□□□□ 0.94
VSX1-207ENST00000557285 MICALL2Q8IY33 904 aa20.95■□□□□ 0.94
VSX1-207ENST00000557285 SMC4Q9NTJ3 1288 aa20.95■□□□□ 0.94
VSX1-207ENST00000557285 CNOT7Q9UIV1 285 aaKnown RBP20.95■□□□□ 0.94
VSX1-207ENST00000557285 PASKQ96RG2 1323 aa20.95■□□□□ 0.94
VSX1-207ENST00000557285 ALDH1L1O75891 902 aa20.94■□□□□ 0.94
VSX1-207ENST00000557285 IFIT5Q13325 482 aaKnown RBP20.94■□□□□ 0.94
VSX1-207ENST00000557285 LMBR1LQ6UX01 489 aa20.94■□□□□ 0.94
VSX1-207ENST00000557285 CCT4P50991 539 aaKnown RBP20.93■□□□□ 0.94
VSX1-207ENST00000557285 TRPM4Q8TD43 1214 aa20.93■□□□□ 0.94
VSX1-207ENST00000557285 CREBZFQ9NS37 354 aa20.93■□□□□ 0.94
VSX1-207ENST00000557285 MKRN1Q9UHC7 482 aaKnown RBP20.93■□□□□ 0.94
VSX1-207ENST00000557285 H7C1D1 291 aa20.92■□□□□ 0.94
VSX1-207ENST00000557285 FMR1Q06787 632 aaKnown RBP eCLIP20.92■□□□□ 0.94
VSX1-207ENST00000557285 TAF7LQ5H9L4 462 aa20.92■□□□□ 0.94
VSX1-207ENST00000557285 FBXW7Q969H0 707 aa20.92■□□□□ 0.94
VSX1-207ENST00000557285 PTPRCP08575 1304 aa20.92■□□□□ 0.94
VSX1-207ENST00000557285 PCNTO95613 3336 aa20.91■□□□□ 0.94
VSX1-207ENST00000557285 TRAF5O00463 557 aa20.91■□□□□ 0.94
VSX1-207ENST00000557285 KCNJ4P48050 445 aa20.91■□□□□ 0.94
VSX1-207ENST00000557285 CCDC57Q2TAC2 916 aa20.91■□□□□ 0.94
VSX1-207ENST00000557285 RBM26Q5T8P6 1007 aaKnown RBP20.91■□□□□ 0.94
VSX1-207ENST00000557285 TRMT2AQ8IZ69 625 aaKnown RBP20.91■□□□□ 0.94
VSX1-207ENST00000557285 SUCLG2Q96I99 432 aa20.91■□□□□ 0.94
VSX1-207ENST00000557285 ZNF594Q96JF6 807 aaPredicted RBP20.91■□□□□ 0.94
VSX1-207ENST00000557285 TMEM88BA6NKF7 163 aa20.9■□□□□ 0.94
VSX1-207ENST00000557285 NBPF7P0C2Y1 421 aaPredicted RBP20.9■□□□□ 0.94
VSX1-207ENST00000557285 CHRNDQ07001 517 aa20.9■□□□□ 0.94
VSX1-207ENST00000557285 TBC1D10BQ4KMP7 808 aaPredicted RBP20.9■□□□□ 0.94
VSX1-207ENST00000557285 SAMD7Q7Z3H4 446 aa20.9■□□□□ 0.94
VSX1-207ENST00000557285 HELBQ8NG08 1087 aaPredicted RBP20.9■□□□□ 0.94
VSX1-207ENST00000557285 MED23Q9ULK4 1368 aa20.89■□□□□ 0.93
VSX1-207ENST00000557285 ZNF804BA4D1E1 1349 aa20.89■□□□□ 0.93
VSX1-207ENST00000557285 KLRK1P26718 216 aa20.89■□□□□ 0.93
VSX1-207ENST00000557285 HIRAP54198 1017 aaPredicted RBP20.89■□□□□ 0.93
VSX1-207ENST00000557285 ALDH1L2Q3SY69 923 aa20.89■□□□□ 0.93
VSX1-207ENST00000557285 ANKRD2Q9GZV1 360 aa20.89■□□□□ 0.93
VSX1-207ENST00000557285 SNAP23O00161 211 aa20.88■□□□□ 0.93
VSX1-207ENST00000557285 PLIN1O60240 522 aa20.88■□□□□ 0.93
VSX1-207ENST00000557285 TAF5LO75529 589 aa20.88■□□□□ 0.93
VSX1-207ENST00000557285 EGFRP00533 1210 aa20.88■□□□□ 0.93
VSX1-207ENST00000557285 TXNRD3Q86VQ6 643 aa20.88■□□□□ 0.93
VSX1-207ENST00000557285 DPF2Q92785 391 aa20.88■□□□□ 0.93
VSX1-207ENST00000557285 ABT1Q9ULW3 272 aaKnown RBP20.88■□□□□ 0.93
VSX1-207ENST00000557285 LEMD3Q9Y2U8 911 aa20.88■□□□□ 0.93
VSX1-207ENST00000557285 VIL1P09327 827 aaKnown RBP20.87■□□□□ 0.93
VSX1-207ENST00000557285 RPS12P25398 132 aaKnown RBP20.87■□□□□ 0.93
VSX1-207ENST00000557285 HNRNPUQ00839 825 aaKnown RBP eCLIP20.87■□□□□ 0.93
VSX1-207ENST00000557285 GLIS2Q9BZE0 524 aaPredicted RBP20.87■□□□□ 0.93
VSX1-207ENST00000557285 CNNM1Q9NRU3 951 aa20.87■□□□□ 0.93
VSX1-207ENST00000557285 NOB1Q9ULX3 412 aaKnown RBP20.87■□□□□ 0.93
VSX1-207ENST00000557285 PSME4Q14997 1843 aa20.87■□□□□ 0.93
VSX1-207ENST00000557285 A0A1B0GUL6 1792 aa20.87■□□□□ 0.93
VSX1-207ENST00000557285 RSBN1LQ6PCB5 846 aaPredicted RBP20.86■□□□□ 0.93
VSX1-207ENST00000557285 LDHAL6AQ6ZMR3 332 aa20.86■□□□□ 0.93
VSX1-207ENST00000557285 KAZALD1Q96I82 304 aa20.86■□□□□ 0.93
VSX1-207ENST00000557285 MXD3Q9BW11 206 aa20.86■□□□□ 0.93
VSX1-207ENST00000557285 BICC1Q9H694 974 aaKnown RBP20.86■□□□□ 0.93
VSX1-207ENST00000557285 ZNF408Q9H9D4 720 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms