RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 MX1P20591 662 aa29.17■■■□□ 2.26
SIX4-203ENST00000556952 BCL11AQ9H165 835 aa29.17■■■□□ 2.26
SIX4-203ENST00000556952 AOX1Q06278 1338 aa29.16■■■□□ 2.26
SIX4-203ENST00000556952 PDE1AP54750 535 aa29.15■■■□□ 2.26
SIX4-203ENST00000556952 GPR162Q16538 588 aa29.15■■■□□ 2.26
SIX4-203ENST00000556952 BMP2KLQ5H9B9 411 aa29.15■■■□□ 2.26
SIX4-203ENST00000556952 C3orf67Q6ZVT6 689 aa29.15■■■□□ 2.26
SIX4-203ENST00000556952 STAP2Q9UGK3 403 aa29.15■■■□□ 2.26
SIX4-203ENST00000556952 KLRG2A4D1S0 409 aaPredicted RBP29.14■■■□□ 2.26
SIX4-203ENST00000556952 SRGNP10124 158 aa29.14■■■□□ 2.26
SIX4-203ENST00000556952 LRRC24Q50LG9 513 aa29.14■■■□□ 2.26
SIX4-203ENST00000556952 PIM2Q9P1W9 311 aa29.14■■■□□ 2.26
SIX4-203ENST00000556952 TFCP2Q12800 502 aa29.13■■■□□ 2.25
SIX4-203ENST00000556952 LDHAL6AQ6ZMR3 332 aa29.13■■■□□ 2.25
SIX4-203ENST00000556952 CDC5LQ99459 802 aaKnown RBP29.13■■■□□ 2.25
SIX4-203ENST00000556952 GPR108Q9NPR9 543 aa29.13■■■□□ 2.25
SIX4-203ENST00000556952 IFIT2P09913 472 aaKnown RBP29.13■■■□□ 2.25
SIX4-203ENST00000556952 PUS3Q9BZE2 481 aaKnown RBP29.13■■■□□ 2.25
SIX4-203ENST00000556952 BCS1LQ9Y276 419 aa29.13■■■□□ 2.25
SIX4-203ENST00000556952 SLX4Q8IY92 1834 aa29.13■■■□□ 2.25
SIX4-203ENST00000556952 TTC22Q5TAA0 569 aa29.12■■■□□ 2.25
SIX4-203ENST00000556952 AACSQ86V21 672 aa29.12■■■□□ 2.25
SIX4-203ENST00000556952 ZNF622Q969S3 477 aaKnown RBP eCLIP29.12■■■□□ 2.25
SIX4-203ENST00000556952 TNNI3KQ59H18 835 aa29.11■■■□□ 2.25
SIX4-203ENST00000556952 GPATCH3Q96I76 525 aa29.11■■■□□ 2.25
SIX4-203ENST00000556952 CNNM1Q9NRU3 951 aa29.11■■■□□ 2.25
SIX4-203ENST00000556952 RIPOR2Q9Y4F9 1068 aa29.11■■■□□ 2.25
SIX4-203ENST00000556952 FPGT-TNNI3KV9GXZ4 949 aa29.11■■■□□ 2.25
SIX4-203ENST00000556952 TTC41PQ6P2S7 1318 aa29.11■■■□□ 2.25
SIX4-203ENST00000556952 ZNF609O15014 1411 aa29.1■■■□□ 2.25
SIX4-203ENST00000556952 IGHMBP2P38935 993 aaKnown RBP29.1■■■□□ 2.25
SIX4-203ENST00000556952 CRY2Q49AN0 593 aa29.1■■■□□ 2.25
SIX4-203ENST00000556952 EAF2Q96CJ1 260 aaPredicted RBP29.1■■■□□ 2.25
SIX4-203ENST00000556952 SEC31BQ9NQW1 1179 aa29.1■■■□□ 2.25
SIX4-203ENST00000556952 CEP126Q9P2H0 1117 aa29.1■■■□□ 2.25
SIX4-203ENST00000556952 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.1■■■□□ 2.25
SIX4-203ENST00000556952 A0A1B0GUL6 1792 aa29.09■■■□□ 2.25
SIX4-203ENST00000556952 TAF1P21675 1872 aa29.09■■■□□ 2.25
SIX4-203ENST00000556952 DALRD3Q5D0E6 543 aaKnown RBP29.09■■■□□ 2.25
SIX4-203ENST00000556952 MASTLQ96GX5 879 aa29.09■■■□□ 2.25
SIX4-203ENST00000556952 MPHOSPH8Q99549 860 aa29.09■■■□□ 2.25
SIX4-203ENST00000556952 MROH5Q6ZUA9 1318 aa29.08■■■□□ 2.25
SIX4-203ENST00000556952 DCAF8L1A6NGE4 600 aa29.08■■■□□ 2.25
SIX4-203ENST00000556952 STYK1Q6J9G0 422 aa29.08■■■□□ 2.25
SIX4-203ENST00000556952 GSPT1P15170 499 aaKnown RBP29.07■■■□□ 2.24
SIX4-203ENST00000556952 NPR1P16066 1061 aa29.07■■■□□ 2.24
SIX4-203ENST00000556952 TTLL6Q8N841 843 aa29.07■■■□□ 2.24
SIX4-203ENST00000556952 AKAP2Q9Y2D5 859 aa29.07■■■□□ 2.24
SIX4-203ENST00000556952 COL4A1P02462 1669 aa29.07■■■□□ 2.24
SIX4-203ENST00000556952 METTL24Q5JXM2 366 aa29.06■■■□□ 2.24
SIX4-203ENST00000556952 ANKRD18AQ8IVF6 992 aa29.06■■■□□ 2.24
SIX4-203ENST00000556952 ARAP2Q8WZ64 1704 aa29.06■■■□□ 2.24
SIX4-203ENST00000556952 C8orf34Q49A92 452 aa29.05■■■□□ 2.24
SIX4-203ENST00000556952 BACH2Q9BYV9 841 aa29.05■■■□□ 2.24
SIX4-203ENST00000556952 ECHDC1Q9NTX5 307 aa29.05■■■□□ 2.24
SIX4-203ENST00000556952 ERC2O15083 957 aa29.05■■■□□ 2.24
SIX4-203ENST00000556952 DDX46Q7L014 1031 aaKnown RBP29.05■■■□□ 2.24
SIX4-203ENST00000556952 CCDC8Q9H0W5 538 aaPredicted RBP29.05■■■□□ 2.24
SIX4-203ENST00000556952 AK9Q5TCS8 1911 aa29.04■■■□□ 2.24
SIX4-203ENST00000556952 PI4K2BQ8TCG2 481 aa29.04■■■□□ 2.24
SIX4-203ENST00000556952 VGLL2Q8N8G2 317 aa29.03■■■□□ 2.24
SIX4-203ENST00000556952 RPGRQ92834 1020 aaKnown RBP29.03■■■□□ 2.24
SIX4-203ENST00000556952 CNKSR1Q969H4 720 aa29.03■■■□□ 2.24
SIX4-203ENST00000556952 CHD4Q14839 1912 aa29.03■■■□□ 2.24
SIX4-203ENST00000556952 GLRX3O76003 335 aaKnown RBP29.02■■■□□ 2.24
SIX4-203ENST00000556952 TSHZ3Q63HK5 1081 aa29.02■■■□□ 2.24
SIX4-203ENST00000556952 PRPF40BQ6NWY9 871 aaKnown RBP29.02■■■□□ 2.24
SIX4-203ENST00000556952 BSDC1Q9NW68 430 aaPredicted RBP29.02■■■□□ 2.24
SIX4-203ENST00000556952 TLR7Q9NYK1 1049 aaKnown RBP29.02■■■□□ 2.24
SIX4-203ENST00000556952 DBNLQ9UJU6 430 aaKnown RBP29.02■■■□□ 2.24
SIX4-203ENST00000556952 HOXA10P31260 410 aaPredicted RBP29.01■■■□□ 2.24
SIX4-203ENST00000556952 A0A1B0GUL7 405 aa29.01■■■□□ 2.23
SIX4-203ENST00000556952 GRIN3BO60391 1043 aa29.01■■■□□ 2.23
SIX4-203ENST00000556952 PDE8BO95263 885 aa29.01■■■□□ 2.23
SIX4-203ENST00000556952 ZNF219Q9P2Y4 722 aaPredicted RBP29.01■■■□□ 2.23
SIX4-203ENST00000556952 CELF1Q92879 486 aaKnown RBP29■■■□□ 2.23
SIX4-203ENST00000556952 RPS8P62241 208 aaKnown RBP28.99■■■□□ 2.23
SIX4-203ENST00000556952 FER1L6Q2WGJ9 1857 aa28.98■■■□□ 2.23
SIX4-203ENST00000556952 GRAPQ13588 217 aa28.98■■■□□ 2.23
SIX4-203ENST00000556952 ATP2B3Q16720 1220 aa28.98■■■□□ 2.23
SIX4-203ENST00000556952 GRAPLQ8TC17 118 aaPredicted RBP28.98■■■□□ 2.23
SIX4-203ENST00000556952 RBM17Q96I25 401 aaKnown RBP28.98■■■□□ 2.23
SIX4-203ENST00000556952 NEUROD6Q96NK8 337 aa28.98■■■□□ 2.23
SIX4-203ENST00000556952 DBNDD2Q9BQY9 259 aa28.98■■■□□ 2.23
SIX4-203ENST00000556952 C21orf2O43822 256 aa28.97■■■□□ 2.23
SIX4-203ENST00000556952 SDSP20132 328 aa28.97■■■□□ 2.23
SIX4-203ENST00000556952 PUM3Q15397 648 aaKnown RBP28.97■■■□□ 2.23
SIX4-203ENST00000556952 SLC51AQ86UW1 340 aa28.97■■■□□ 2.23
SIX4-203ENST00000556952 CRAMP1Q96RY5 1269 aa28.97■■■□□ 2.23
SIX4-203ENST00000556952 ALDH1B1P30837 517 aa28.96■■■□□ 2.23
SIX4-203ENST00000556952 TIMM10P62072 90 aa28.96■■■□□ 2.23
SIX4-203ENST00000556952 CHRNDQ07001 517 aa28.96■■■□□ 2.23
SIX4-203ENST00000556952 TSHZ2Q9NRE2 1034 aa28.96■■■□□ 2.23
SIX4-203ENST00000556952 ATP5JP18859 108 aa28.95■■■□□ 2.22
SIX4-203ENST00000556952 OLFM4Q6UX06 510 aa28.95■■■□□ 2.22
SIX4-203ENST00000556952 ARHGAP27Q6ZUM4 889 aa28.95■■■□□ 2.22
SIX4-203ENST00000556952 C7orf43Q8WVR3 580 aa28.95■■■□□ 2.22
SIX4-203ENST00000556952 LPIN2Q92539 896 aa28.95■■■□□ 2.22
SIX4-203ENST00000556952 SBF1O95248 1867 aa28.94■■■□□ 2.22
SIX4-203ENST00000556952 CDC45O75419 566 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms