RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 ANKRD2Q9GZV1 360 aa20.43■□□□□ 0.86
PCNX4-213ENST00000556907 PODXL2Q9NZ53 605 aa20.43■□□□□ 0.86
PCNX4-213ENST00000556907 SNED1Q8TER0 1413 aa20.43■□□□□ 0.86
PCNX4-213ENST00000556907 NFKBIEO00221 500 aa20.42■□□□□ 0.86
PCNX4-213ENST00000556907 LDHAL6AQ6ZMR3 332 aa20.42■□□□□ 0.86
PCNX4-213ENST00000556907 CHD4Q14839 1912 aa20.41■□□□□ 0.86
PCNX4-213ENST00000556907 LMNB1P20700 586 aa20.41■□□□□ 0.86
PCNX4-213ENST00000556907 MINPP1Q9UNW1 487 aa20.41■□□□□ 0.86
PCNX4-213ENST00000556907 NSFL1CQ9UNZ2 370 aaKnown RBP20.41■□□□□ 0.86
PCNX4-213ENST00000556907 PCDHB15Q9Y5E8 787 aa20.41■□□□□ 0.86
PCNX4-213ENST00000556907 XDHP47989 1333 aa20.41■□□□□ 0.86
PCNX4-213ENST00000556907 SRGAP3O43295 1099 aa20.4■□□□□ 0.86
PCNX4-213ENST00000556907 ATP8B2P98198 1209 aa20.4■□□□□ 0.86
PCNX4-213ENST00000556907 KDM2BQ8NHM5 1336 aa20.4■□□□□ 0.86
PCNX4-213ENST00000556907 CNNM1Q9NRU3 951 aa20.4■□□□□ 0.86
PCNX4-213ENST00000556907 ANKIB1Q9P2G1 1089 aa20.4■□□□□ 0.86
PCNX4-213ENST00000556907 ATP2B4P23634 1241 aa20.39■□□□□ 0.85
PCNX4-213ENST00000556907 RFX5P48382 616 aaPredicted RBP20.39■□□□□ 0.85
PCNX4-213ENST00000556907 OLFM4Q6UX06 510 aa20.39■□□□□ 0.85
PCNX4-213ENST00000556907 RPAP2Q8IXW5 612 aaPredicted RBP20.39■□□□□ 0.85
PCNX4-213ENST00000556907 EYA3Q99504 573 aa20.39■□□□□ 0.85
PCNX4-213ENST00000556907 COPRSQ9NQ92 184 aa20.39■□□□□ 0.85
PCNX4-213ENST00000556907 LEMD3Q9Y2U8 911 aa20.39■□□□□ 0.85
PCNX4-213ENST00000556907 MROH5Q6ZUA9 1318 aa20.38■□□□□ 0.85
PCNX4-213ENST00000556907 ZC3H4Q9UPT8 1303 aaKnown RBP20.38■□□□□ 0.85
PCNX4-213ENST00000556907 CIAO1O76071 339 aa20.38■□□□□ 0.85
PCNX4-213ENST00000556907 GPSM2P81274 684 aa20.38■□□□□ 0.85
PCNX4-213ENST00000556907 PTPN12Q05209 780 aaKnown RBP20.38■□□□□ 0.85
PCNX4-213ENST00000556907 ZNF594Q96JF6 807 aaPredicted RBP20.38■□□□□ 0.85
PCNX4-213ENST00000556907 C1orf115Q9H7X2 142 aa20.38■□□□□ 0.85
PCNX4-213ENST00000556907 GGA1Q9UJY5 639 aa20.38■□□□□ 0.85
PCNX4-213ENST00000556907 SPEF2Q9C093 1822 aa20.38■□□□□ 0.85
PCNX4-213ENST00000556907 COL4A1P02462 1669 aa20.38■□□□□ 0.85
PCNX4-213ENST00000556907 SBF1O95248 1867 aa20.37■□□□□ 0.85
PCNX4-213ENST00000556907 HDAC1Q13547 482 aaPredicted RBP20.37■□□□□ 0.85
PCNX4-213ENST00000556907 RIPOR2Q9Y4F9 1068 aa20.37■□□□□ 0.85
PCNX4-213ENST00000556907 UTRNP46939 3433 aa20.36■□□□□ 0.85
PCNX4-213ENST00000556907 EYA2O00167 538 aa20.36■□□□□ 0.85
PCNX4-213ENST00000556907 IARSP41252 1262 aaKnown RBP20.36■□□□□ 0.85
PCNX4-213ENST00000556907 RASSF7Q02833 373 aa20.36■□□□□ 0.85
PCNX4-213ENST00000556907 CHRNDQ07001 517 aa20.36■□□□□ 0.85
PCNX4-213ENST00000556907 CENPQQ7L2Z9 268 aaPredicted RBP20.36■□□□□ 0.85
PCNX4-213ENST00000556907 TBC1D16Q8TBP0 767 aa20.36■□□□□ 0.85
PCNX4-213ENST00000556907 SSH3Q8TE77 659 aa20.36■□□□□ 0.85
PCNX4-213ENST00000556907 C6orf229H3BNL8 230 aa20.35■□□□□ 0.85
PCNX4-213ENST00000556907 HMMRO75330 724 aa20.35■□□□□ 0.85
PCNX4-213ENST00000556907 POLA2Q14181 598 aa20.35■□□□□ 0.85
PCNX4-213ENST00000556907 C9orf131Q5VYM1 1079 aa20.35■□□□□ 0.85
PCNX4-213ENST00000556907 CEP85Q6P2H3 762 aa20.35■□□□□ 0.85
PCNX4-213ENST00000556907 A0A1B0GUL6 1792 aa20.35■□□□□ 0.85
PCNX4-213ENST00000556907 LTBP1Q14766 1721 aa20.35■□□□□ 0.85
PCNX4-213ENST00000556907 DICER1Q9UPY3 1922 aaKnown RBP20.34■□□□□ 0.85
PCNX4-213ENST00000556907 PNMA6EA0A0J9YXQ4 647 aa20.34■□□□□ 0.85
PCNX4-213ENST00000556907 UFL1O94874 794 aa20.34■□□□□ 0.85
PCNX4-213ENST00000556907 IL15P40933 162 aaPredicted RBP20.34■□□□□ 0.85
PCNX4-213ENST00000556907 KIAA2012Q0VF49 1180 aa20.34■□□□□ 0.85
PCNX4-213ENST00000556907 WASHC4Q2M389 1173 aa20.34■□□□□ 0.85
PCNX4-213ENST00000556907 ZC3H12CQ9C0D7 883 aaKnown RBP20.34■□□□□ 0.85
PCNX4-213ENST00000556907 ZNF277Q9NRM2 450 aaPredicted RBP20.34■□□□□ 0.85
PCNX4-213ENST00000556907 RNF181Q9P0P0 153 aa20.34■□□□□ 0.85
PCNX4-213ENST00000556907 POLLQ9UGP5 575 aa20.34■□□□□ 0.85
PCNX4-213ENST00000556907 CCDC88AQ3V6T2 1871 aa20.33■□□□□ 0.85
PCNX4-213ENST00000556907 JDP2Q8WYK2 163 aa20.33■□□□□ 0.85
PCNX4-213ENST00000556907 PUS3Q9BZE2 481 aaKnown RBP20.33■□□□□ 0.85
PCNX4-213ENST00000556907 RWDD1Q9H446 243 aaPredicted RBP20.33■□□□□ 0.85
PCNX4-213ENST00000556907 ZNF804BA4D1E1 1349 aa20.32■□□□□ 0.84
PCNX4-213ENST00000556907 PPIP5K2O43314 1243 aa20.32■□□□□ 0.84
PCNX4-213ENST00000556907 KCNJ4P48050 445 aa20.32■□□□□ 0.84
PCNX4-213ENST00000556907 UBE4AQ14139 1066 aa20.32■□□□□ 0.84
PCNX4-213ENST00000556907 LRRC24Q50LG9 513 aa20.32■□□□□ 0.84
PCNX4-213ENST00000556907 METTL24Q5JXM2 366 aa20.32■□□□□ 0.84
PCNX4-213ENST00000556907 LARGE2Q8N3Y3 721 aa20.32■□□□□ 0.84
PCNX4-213ENST00000556907 KLHDC4Q8TBB5 520 aa20.32■□□□□ 0.84
PCNX4-213ENST00000556907 DUOX1Q9NRD9 1551 aa20.31■□□□□ 0.84
PCNX4-213ENST00000556907 PDE8BO95263 885 aa20.31■□□□□ 0.84
PCNX4-213ENST00000556907 IGHDP01880 384 aa20.31■□□□□ 0.84
PCNX4-213ENST00000556907 G3BP1Q13283 466 aaKnown RBP eCLIP20.31■□□□□ 0.84
PCNX4-213ENST00000556907 C15orf52Q6ZUT6 534 aaKnown RBP20.31■□□□□ 0.84
PCNX4-213ENST00000556907 SIRT2Q8IXJ6 389 aa20.31■□□□□ 0.84
PCNX4-213ENST00000556907 NOP58Q9Y2X3 529 aaKnown RBP20.31■□□□□ 0.84
PCNX4-213ENST00000556907 MED23Q9ULK4 1368 aa20.31■□□□□ 0.84
PCNX4-213ENST00000556907 PRELPP51888 382 aa20.3■□□□□ 0.84
PCNX4-213ENST00000556907 HSP90AB4PQ58FF6 505 aa20.3■□□□□ 0.84
PCNX4-213ENST00000556907 ATG9AQ7Z3C6 839 aa20.3■□□□□ 0.84
PCNX4-213ENST00000556907 SLC51AQ86UW1 340 aa20.3■□□□□ 0.84
PCNX4-213ENST00000556907 CEP126Q9P2H0 1117 aa20.3■□□□□ 0.84
PCNX4-213ENST00000556907 NIM1KQ8IY84 436 aa20.29■□□□□ 0.84
PCNX4-213ENST00000556907 VGLL2Q8N8G2 317 aa20.29■□□□□ 0.84
PCNX4-213ENST00000556907 SIL1Q9H173 461 aa20.29■□□□□ 0.84
PCNX4-213ENST00000556907 PA2G4Q9UQ80 394 aaKnown RBP20.29■□□□□ 0.84
PCNX4-213ENST00000556907 TAF5LO75529 589 aa20.28■□□□□ 0.84
PCNX4-213ENST00000556907 SURF6O75683 361 aaKnown RBP20.28■□□□□ 0.84
PCNX4-213ENST00000556907 AOC3Q16853 763 aa20.28■□□□□ 0.84
PCNX4-213ENST00000556907 HELBQ8NG08 1087 aaPredicted RBP20.28■□□□□ 0.84
PCNX4-213ENST00000556907 G3V3G9 751 aa20.27■□□□□ 0.84
PCNX4-213ENST00000556907 FZD9O00144 591 aa20.27■□□□□ 0.84
PCNX4-213ENST00000556907 PUM3Q15397 648 aaKnown RBP20.27■□□□□ 0.84
PCNX4-213ENST00000556907 DCAF8Q5TAQ9 597 aa20.27■□□□□ 0.84
PCNX4-213ENST00000556907 DPY19L2Q6NUT2 758 aa20.27■□□□□ 0.84
PCNX4-213ENST00000556907 ERC1Q8IUD2 1116 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms