RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 PPIP5K2O43314 1243 aa9.27□□□□□ -0.93
PCNX1-213ENST00000556846 LMOD1P29536 600 aaPredicted RBP9.27□□□□□ -0.93
PCNX1-213ENST00000556846 EPHX2P34913 555 aa9.27□□□□□ -0.93
PCNX1-213ENST00000556846 DPP8Q6V1X1 898 aaPredicted RBP9.27□□□□□ -0.93
PCNX1-213ENST00000556846 PNMA8AQ86V59 439 aaPredicted RBP9.27□□□□□ -0.93
PCNX1-213ENST00000556846 SP8Q8IXZ3 490 aa9.27□□□□□ -0.93
PCNX1-213ENST00000556846 NIM1KQ8IY84 436 aa9.27□□□□□ -0.93
PCNX1-213ENST00000556846 GPC2Q8N158 579 aa9.27□□□□□ -0.93
PCNX1-213ENST00000556846 MPNDQ8N594 471 aa9.27□□□□□ -0.93
PCNX1-213ENST00000556846 SUPT20HQ8NEM7 779 aa9.27□□□□□ -0.93
PCNX1-213ENST00000556846 FAM89AQ96GI7 184 aa9.27□□□□□ -0.93
PCNX1-213ENST00000556846 MS4A4AQ96JQ5 239 aa9.27□□□□□ -0.93
PCNX1-213ENST00000556846 TAF1DQ9H5J8 278 aaPredicted RBP9.27□□□□□ -0.93
PCNX1-213ENST00000556846 SBF1O95248 1867 aa9.27□□□□□ -0.93
PCNX1-213ENST00000556846 ABCC4O15439 1325 aa9.27□□□□□ -0.93
PCNX1-213ENST00000556846 TNRC6CQ9HCJ0 1690 aaKnown RBP9.26□□□□□ -0.93
PCNX1-213ENST00000556846 RIC1Q4ADV7 1423 aa9.26□□□□□ -0.93
PCNX1-213ENST00000556846 ZNF853P0CG23 659 aa9.26□□□□□ -0.93
PCNX1-213ENST00000556846 AOC3Q16853 763 aa9.26□□□□□ -0.93
PCNX1-213ENST00000556846 CCDC184Q52MB2 194 aa9.26□□□□□ -0.93
PCNX1-213ENST00000556846 ARSIQ5FYB1 569 aa9.26□□□□□ -0.93
PCNX1-213ENST00000556846 CCDC30Q5VVM6 783 aa9.26□□□□□ -0.93
PCNX1-213ENST00000556846 LDHDQ86WU2 507 aa9.26□□□□□ -0.93
PCNX1-213ENST00000556846 C8orf58Q8NAV2 365 aa9.26□□□□□ -0.93
PCNX1-213ENST00000556846 PHAXQ9H814 394 aaKnown RBP9.26□□□□□ -0.93
PCNX1-213ENST00000556846 MRS2Q9HD23 443 aa9.26□□□□□ -0.93
PCNX1-213ENST00000556846 DDX58O95786 925 aaKnown RBP9.25□□□□□ -0.93
PCNX1-213ENST00000556846 HSP90B1P14625 803 aaKnown RBP9.25□□□□□ -0.93
PCNX1-213ENST00000556846 GRAPQ13588 217 aa9.25□□□□□ -0.93
PCNX1-213ENST00000556846 GRAPLQ8TC17 118 aaPredicted RBP9.25□□□□□ -0.93
PCNX1-213ENST00000556846 MYD88Q99836 296 aa9.25□□□□□ -0.93
PCNX1-213ENST00000556846 ISCA1Q9BUE6 129 aa9.25□□□□□ -0.93
PCNX1-213ENST00000556846 VPS33BQ9H267 617 aa9.25□□□□□ -0.93
PCNX1-213ENST00000556846 SALL2Q9Y467 1007 aaPredicted RBP9.25□□□□□ -0.93
PCNX1-213ENST00000556846 FER1L6Q2WGJ9 1857 aa9.24□□□□□ -0.93
PCNX1-213ENST00000556846 IRS4O14654 1257 aaPredicted RBP9.24□□□□□ -0.93
PCNX1-213ENST00000556846 LSM11P83369 360 aaKnown RBP eCLIP9.24□□□□□ -0.93
PCNX1-213ENST00000556846 TMC4Q7Z404 712 aa9.24□□□□□ -0.93
PCNX1-213ENST00000556846 SLC51AQ86UW1 340 aa9.24□□□□□ -0.93
PCNX1-213ENST00000556846 CNTROBQ8N137 903 aa9.24□□□□□ -0.93
PCNX1-213ENST00000556846 TSR2Q969E8 191 aaKnown RBP9.24□□□□□ -0.93
PCNX1-213ENST00000556846 STK31Q9BXU1 1019 aa9.24□□□□□ -0.93
PCNX1-213ENST00000556846 ZNRF3Q9ULT6 936 aa9.24□□□□□ -0.93
PCNX1-213ENST00000556846 NSFL1CQ9UNZ2 370 aaKnown RBP9.24□□□□□ -0.93
PCNX1-213ENST00000556846 TIAM2Q8IVF5 1701 aa9.24□□□□□ -0.93
PCNX1-213ENST00000556846 WDR90Q96KV7 1748 aa9.23□□□□□ -0.93
PCNX1-213ENST00000556846 EPS15P42566 896 aa9.23□□□□□ -0.93
PCNX1-213ENST00000556846 TRIM28Q13263 835 aaKnown RBP9.23□□□□□ -0.93
PCNX1-213ENST00000556846 SF3B3Q15393 1217 aaKnown RBP9.23□□□□□ -0.93
PCNX1-213ENST00000556846 IFFO2Q5TF58 517 aa9.23□□□□□ -0.93
PCNX1-213ENST00000556846 MAP1SQ66K74 1059 aaPredicted RBP9.23□□□□□ -0.93
PCNX1-213ENST00000556846 WWC1Q8IX03 1113 aa9.23□□□□□ -0.93
PCNX1-213ENST00000556846 JMYQ8N9B5 988 aa9.23□□□□□ -0.93
PCNX1-213ENST00000556846 ZBTB38Q8NAP3 1195 aaPredicted RBP9.23□□□□□ -0.93
PCNX1-213ENST00000556846 BCL2L13Q9BXK5 485 aa9.23□□□□□ -0.93
PCNX1-213ENST00000556846 MKRN1Q9UHC7 482 aaKnown RBP9.23□□□□□ -0.93
PCNX1-213ENST00000556846 NUP98P52948 1817 aa9.23□□□□□ -0.93
PCNX1-213ENST00000556846 TMEM88BA6NKF7 163 aa9.22□□□□□ -0.93
PCNX1-213ENST00000556846 C6orf229H3BNL8 230 aa9.22□□□□□ -0.93
PCNX1-213ENST00000556846 RAD17O75943 681 aa9.22□□□□□ -0.93
PCNX1-213ENST00000556846 RPS8P62241 208 aaKnown RBP9.22□□□□□ -0.93
PCNX1-213ENST00000556846 KIAA2012Q0VF49 1180 aa9.22□□□□□ -0.93
PCNX1-213ENST00000556846 NEXNQ0ZGT2 675 aa9.22□□□□□ -0.93
PCNX1-213ENST00000556846 TNIP1Q15025 636 aa9.22□□□□□ -0.93
PCNX1-213ENST00000556846 CCDC27Q2M243 656 aa9.22□□□□□ -0.93
PCNX1-213ENST00000556846 WASHC4Q2M389 1173 aa9.22□□□□□ -0.93
PCNX1-213ENST00000556846 CIAPIN1Q6FI81 312 aa9.22□□□□□ -0.93
PCNX1-213ENST00000556846 TSPYL6Q8N831 410 aa9.22□□□□□ -0.93
PCNX1-213ENST00000556846 CCDC191Q8NCU4 936 aa9.22□□□□□ -0.93
PCNX1-213ENST00000556846 JARID2Q92833 1246 aaPredicted RBP9.22□□□□□ -0.93
PCNX1-213ENST00000556846 CELF1Q92879 486 aaKnown RBP9.22□□□□□ -0.93
PCNX1-213ENST00000556846 METTL22Q9BUU2 404 aaPredicted RBP9.22□□□□□ -0.93
PCNX1-213ENST00000556846 RTFDC1Q9BY42 306 aaPredicted RBP9.22□□□□□ -0.93
PCNX1-213ENST00000556846 CWC25Q9NXE8 425 aaPredicted RBP9.22□□□□□ -0.93
PCNX1-213ENST00000556846 MAP3K2Q9Y2U5 619 aa9.22□□□□□ -0.93
PCNX1-213ENST00000556846 CACNA1SQ13698 1873 aa9.21□□□□□ -0.93
PCNX1-213ENST00000556846 CCDC88AQ3V6T2 1871 aa9.21□□□□□ -0.93
PCNX1-213ENST00000556846 ITGBL1O95965 494 aaPredicted RBP9.21□□□□□ -0.94
PCNX1-213ENST00000556846 SCNN1DP51172 638 aa9.21□□□□□ -0.94
PCNX1-213ENST00000556846 CXCL9Q07325 125 aa9.21□□□□□ -0.94
PCNX1-213ENST00000556846 TWISTNBQ3B726 338 aaPredicted RBP9.21□□□□□ -0.94
PCNX1-213ENST00000556846 KSR2Q6VAB6 950 aa9.21□□□□□ -0.94
PCNX1-213ENST00000556846 USP50Q70EL3 339 aaPredicted RBP9.21□□□□□ -0.94
PCNX1-213ENST00000556846 CCDC85AQ96PX6 553 aaPredicted RBP9.21□□□□□ -0.94
PCNX1-213ENST00000556846 ANKIB1Q9P2G1 1089 aa9.21□□□□□ -0.94
PCNX1-213ENST00000556846 ARFGEF2Q9Y6D5 1785 aa9.2□□□□□ -0.94
PCNX1-213ENST00000556846 PI4KAP2A4QPH2 592 aa9.2□□□□□ -0.94
PCNX1-213ENST00000556846 PDE8AO60658 829 aa9.2□□□□□ -0.94
PCNX1-213ENST00000556846 PCCAP05165 728 aaPredicted RBP9.2□□□□□ -0.94
PCNX1-213ENST00000556846 GMPSP49915 693 aaPredicted RBP9.2□□□□□ -0.94
PCNX1-213ENST00000556846 GPSM2P81274 684 aa9.2□□□□□ -0.94
PCNX1-213ENST00000556846 CCDC152Q4G0S7 254 aa9.2□□□□□ -0.94
PCNX1-213ENST00000556846 PAXIP1Q6ZW49 1069 aaPredicted RBP9.2□□□□□ -0.94
PCNX1-213ENST00000556846 FAM9BQ8IZU0 186 aa9.2□□□□□ -0.94
PCNX1-213ENST00000556846 PI4KAP1Q8N8J0 262 aa9.2□□□□□ -0.94
PCNX1-213ENST00000556846 KHSRPQ92945 711 aaKnown RBP eCLIP9.2□□□□□ -0.945e-7■■□□□ 14
PCNX1-213ENST00000556846 EYA3Q99504 573 aa9.2□□□□□ -0.94
PCNX1-213ENST00000556846 ZC3H12CQ9C0D7 883 aaKnown RBP9.2□□□□□ -0.94
PCNX1-213ENST00000556846 SEC31BQ9NQW1 1179 aa9.2□□□□□ -0.94
PCNX1-213ENST00000556846 ADARB2Q9NS39 739 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms