RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 GSX2Q9BZM3 304 aa7.42□□□□□ -1.22
FCF1-208ENST00000556814 AVENQ9NQS1 362 aaPredicted RBP7.42□□□□□ -1.22
FCF1-208ENST00000556814 CCDC87Q9NVE4 849 aa7.42□□□□□ -1.22
FCF1-208ENST00000556814 USP20Q9Y2K6 914 aa7.42□□□□□ -1.22
FCF1-208ENST00000556814 MAPK1P28482 360 aa7.41□□□□□ -1.22
FCF1-208ENST00000556814 COL9A3Q14050 684 aaPredicted RBP7.41□□□□□ -1.22
FCF1-208ENST00000556814 CCDC27Q2M243 656 aa7.41□□□□□ -1.22
FCF1-208ENST00000556814 TMCO4Q5TGY1 634 aa7.41□□□□□ -1.22
FCF1-208ENST00000556814 PDE12Q6L8Q7 609 aaKnown RBP7.41□□□□□ -1.22
FCF1-208ENST00000556814 ZSCAN29Q8IWY8 852 aaPredicted RBP7.41□□□□□ -1.22
FCF1-208ENST00000556814 RBCK1Q9BYM8 510 aa7.41□□□□□ -1.22
FCF1-208ENST00000556814 GRNP28799 593 aaKnown RBP7.4□□□□□ -1.22
FCF1-208ENST00000556814 GRIK4Q16099 956 aa7.4□□□□□ -1.22
FCF1-208ENST00000556814 C8orf34Q49A92 452 aa7.4□□□□□ -1.22
FCF1-208ENST00000556814 ZNF468Q5VIY5 522 aaPredicted RBP7.4□□□□□ -1.22
FCF1-208ENST00000556814 XKR5Q6UX68 686 aa7.4□□□□□ -1.22
FCF1-208ENST00000556814 NLRP13Q86W25 1043 aa7.4□□□□□ -1.22
FCF1-208ENST00000556814 GJD3Q8N144 294 aa7.4□□□□□ -1.22
FCF1-208ENST00000556814 TMC1Q8TDI8 760 aa7.4□□□□□ -1.22
FCF1-208ENST00000556814 DMRTB1Q96MA1 342 aa7.4□□□□□ -1.22
FCF1-208ENST00000556814 FMNL2Q96PY5 1086 aa7.4□□□□□ -1.22
FCF1-208ENST00000556814 SLC30A3Q99726 388 aa7.4□□□□□ -1.22
FCF1-208ENST00000556814 KRTAP17-1Q9BYP8 105 aa7.4□□□□□ -1.22
FCF1-208ENST00000556814 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.4□□□□□ -1.22
FCF1-208ENST00000556814 COL17A1Q9UMD9 1497 aaPredicted RBP7.39□□□□□ -1.23
FCF1-208ENST00000556814 TRIP4Q15650 581 aaPredicted RBP7.39□□□□□ -1.23
FCF1-208ENST00000556814 ZNF438Q7Z4V0 828 aa7.39□□□□□ -1.23
FCF1-208ENST00000556814 BHMTQ93088 406 aa7.39□□□□□ -1.23
FCF1-208ENST00000556814 SASH3O75995 380 aa7.38□□□□□ -1.23
FCF1-208ENST00000556814 MAP3K6O95382 1288 aa7.38□□□□□ -1.23
FCF1-208ENST00000556814 NEFLP07196 543 aa7.38□□□□□ -1.23
FCF1-208ENST00000556814 RARAP10276 462 aa7.38□□□□□ -1.23
FCF1-208ENST00000556814 YBX3P16989 372 aaKnown RBP eCLIP7.38□□□□□ -1.23
FCF1-208ENST00000556814 NFKB1P19838 968 aa7.38□□□□□ -1.23
FCF1-208ENST00000556814 ADH6P28332 368 aa7.38□□□□□ -1.23
FCF1-208ENST00000556814 PCBP4P57723 403 aaKnown RBP7.38□□□□□ -1.23
FCF1-208ENST00000556814 GGNBP2Q9H3C7 697 aa7.38□□□□□ -1.23
FCF1-208ENST00000556814 SIN3BO75182 1162 aa7.37□□□□□ -1.23
FCF1-208ENST00000556814 FZD5Q13467 585 aa7.37□□□□□ -1.23
FCF1-208ENST00000556814 PCSK7Q16549 785 aa7.37□□□□□ -1.23
FCF1-208ENST00000556814 TTC39BQ5VTQ0 682 aaPredicted RBP7.37□□□□□ -1.23
FCF1-208ENST00000556814 KRT25Q7Z3Z0 450 aa7.37□□□□□ -1.23
FCF1-208ENST00000556814 SYT9Q86SS6 491 aa7.37□□□□□ -1.23
FCF1-208ENST00000556814 FAM129BQ96TA1 746 aa7.37□□□□□ -1.23
FCF1-208ENST00000556814 ELP3Q9H9T3 547 aa7.37□□□□□ -1.23
FCF1-208ENST00000556814 ERCC3P19447 782 aa7.36□□□□□ -1.23
FCF1-208ENST00000556814 TARSP26639 723 aaKnown RBP7.36□□□□□ -1.23
FCF1-208ENST00000556814 C8orf86Q6ZUL3 223 aa7.36□□□□□ -1.23
FCF1-208ENST00000556814 RAB44Q7Z6P3 723 aaPredicted RBP7.36□□□□□ -1.23
FCF1-208ENST00000556814 ASB16Q96NS5 453 aa7.36□□□□□ -1.23
FCF1-208ENST00000556814 ABI2Q9NYB9 513 aaPredicted RBP7.36□□□□□ -1.23
FCF1-208ENST00000556814 PSAPP07602 524 aa7.35□□□□□ -1.23
FCF1-208ENST00000556814 TMC7Q7Z402 723 aa7.35□□□□□ -1.23
FCF1-208ENST00000556814 PMEPA1Q969W9 287 aa7.35□□□□□ -1.23
FCF1-208ENST00000556814 ALKBH8Q96BT7 664 aaKnown RBP7.35□□□□□ -1.23
FCF1-208ENST00000556814 APBA3O96018 575 aa7.34□□□□□ -1.23
FCF1-208ENST00000556814 H2AFB1P0C5Y9 115 aa7.34□□□□□ -1.23
FCF1-208ENST00000556814 H2AFB2P0C5Z0 115 aa7.34□□□□□ -1.23
FCF1-208ENST00000556814 SOX18P35713 384 aa7.34□□□□□ -1.23
FCF1-208ENST00000556814 SNX29Q8TEQ0 813 aa7.34□□□□□ -1.23
FCF1-208ENST00000556814 TNFRSF25Q93038 417 aa7.34□□□□□ -1.23
FCF1-208ENST00000556814 TLR7Q9NYK1 1049 aaKnown RBP7.34□□□□□ -1.23
FCF1-208ENST00000556814 ZFATQ9P243 1243 aa7.34□□□□□ -1.23
FCF1-208ENST00000556814 A6NHS1 94 aa7.33□□□□□ -1.24
FCF1-208ENST00000556814 MMP20O60882 483 aa7.33□□□□□ -1.24
FCF1-208ENST00000556814 TNFRSF21O75509 655 aa7.33□□□□□ -1.24
FCF1-208ENST00000556814 ALAS2P22557 587 aa7.33□□□□□ -1.24
FCF1-208ENST00000556814 TXKP42681 527 aa7.33□□□□□ -1.24
FCF1-208ENST00000556814 MFAP1P55081 439 aaKnown RBP7.33□□□□□ -1.24
FCF1-208ENST00000556814 PLAURQ03405 335 aa7.33□□□□□ -1.24
FCF1-208ENST00000556814 DHX32Q7L7V1 743 aaKnown RBP7.33□□□□□ -1.24
FCF1-208ENST00000556814 TMEM63CQ9P1W3 806 aa7.33□□□□□ -1.24
FCF1-208ENST00000556814 ADARB2-AS1A8MUL3 147 aa7.32□□□□□ -1.24
FCF1-208ENST00000556814 TREHO43280 583 aa7.32□□□□□ -1.24
FCF1-208ENST00000556814 PAX4O43316 350 aa7.32□□□□□ -1.24
FCF1-208ENST00000556814 PHACTR2O75167 634 aa7.32□□□□□ -1.24
FCF1-208ENST00000556814 NRLP54845 237 aa7.32□□□□□ -1.24
FCF1-208ENST00000556814 PLCB3Q01970 1234 aa7.32□□□□□ -1.24
FCF1-208ENST00000556814 LCE4AQ5TA78 99 aa7.32□□□□□ -1.24
FCF1-208ENST00000556814 OR13H1Q8NG92 308 aa7.32□□□□□ -1.24
FCF1-208ENST00000556814 UBE2OQ9C0C9 1292 aaKnown RBP7.32□□□□□ -1.24
FCF1-208ENST00000556814 IGFLR1Q9H665 355 aa7.32□□□□□ -1.24
FCF1-208ENST00000556814 CCDC9Q9Y3X0 531 aaKnown RBP7.32□□□□□ -1.24
FCF1-208ENST00000556814 ELOA3CA0A087WX78 387 aaPredicted RBP7.31□□□□□ -1.24
FCF1-208ENST00000556814 ELOA3DA6NLF2 546 aaPredicted RBP7.31□□□□□ -1.24
FCF1-208ENST00000556814 GPR182O15218 404 aa7.31□□□□□ -1.24
FCF1-208ENST00000556814 IGHA2P01877 340 aa7.31□□□□□ -1.24
FCF1-208ENST00000556814 HOXD8P13378 290 aaPredicted RBP7.31□□□□□ -1.24
FCF1-208ENST00000556814 CES1P23141 567 aa7.31□□□□□ -1.24
FCF1-208ENST00000556814 GPLD1P80108 840 aa7.31□□□□□ -1.24
FCF1-208ENST00000556814 COL19A1Q14993 1142 aa7.31□□□□□ -1.24
FCF1-208ENST00000556814 ELOA3BQ3SY89 546 aa7.31□□□□□ -1.24
FCF1-208ENST00000556814 PRRT3Q5FWE3 981 aa7.31□□□□□ -1.24
FCF1-208ENST00000556814 ELOA3Q8NG57 546 aa7.31□□□□□ -1.24
FCF1-208ENST00000556814 TRPM4Q8TD43 1214 aa7.31□□□□□ -1.24
FCF1-208ENST00000556814 MDFIQ99750 246 aa7.31□□□□□ -1.24
FCF1-208ENST00000556814 KRTAP4-11Q9BYQ6 195 aa7.31□□□□□ -1.24
FCF1-208ENST00000556814 NIF3L1Q9GZT8 377 aa7.31□□□□□ -1.24
FCF1-208ENST00000556814 DNAJC25Q9H1X3 360 aa7.31□□□□□ -1.24
FCF1-208ENST00000556814 ANKRD33BA6NCL7 494 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms