RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 FNBP4Q8N3X1 1017 aaPredicted RBP8.38□□□□□ -1.07
TMEM260-212ENST00000556810 LARGE2Q8N3Y3 721 aa8.38□□□□□ -1.07
TMEM260-212ENST00000556810 OGFOD1Q8N543 542 aa8.38□□□□□ -1.07
TMEM260-212ENST00000556810 GLMNQ92990 594 aa8.38□□□□□ -1.07
TMEM260-212ENST00000556810 DEPDC5O75140 1603 aa8.38□□□□□ -1.07
TMEM260-212ENST00000556810 SERTM1A2A2V5 107 aa8.37□□□□□ -1.07
TMEM260-212ENST00000556810 PALM3A6NDB9 673 aaPredicted RBP8.37□□□□□ -1.07
TMEM260-212ENST00000556810 EML1O00423 815 aa8.37□□□□□ -1.07
TMEM260-212ENST00000556810 PLA2G4EQ3MJ16 856 aa8.37□□□□□ -1.07
TMEM260-212ENST00000556810 GGT6Q6P531 493 aa8.37□□□□□ -1.07
TMEM260-212ENST00000556810 ZMYND15Q9H091 742 aa8.37□□□□□ -1.07
TMEM260-212ENST00000556810 A2MP01023 1474 aa8.37□□□□□ -1.07
TMEM260-212ENST00000556810 TET3O43151 1660 aa8.37□□□□□ -1.07
TMEM260-212ENST00000556810 CLTCQ00610 1675 aaKnown RBP8.37□□□□□ -1.07
TMEM260-212ENST00000556810 M0R2N6 131 aa8.36□□□□□ -1.07
TMEM260-212ENST00000556810 KIF3BO15066 747 aa8.36□□□□□ -1.07
TMEM260-212ENST00000556810 ADH6P28332 368 aa8.36□□□□□ -1.07
TMEM260-212ENST00000556810 PSMA6P60900 246 aaKnown RBP8.36□□□□□ -1.07
TMEM260-212ENST00000556810 LAMC2Q13753 1193 aa8.36□□□□□ -1.07
TMEM260-212ENST00000556810 SH3PXD2AQ5TCZ1 1133 aa8.36□□□□□ -1.07
TMEM260-212ENST00000556810 SIX5Q8N196 739 aa8.36□□□□□ -1.07
TMEM260-212ENST00000556810 BTBD6Q96KE9 485 aa8.36□□□□□ -1.07
TMEM260-212ENST00000556810 TSPAN10Q9H1Z9 355 aaPredicted RBP8.36□□□□□ -1.07
TMEM260-212ENST00000556810 AVENQ9NQS1 362 aaPredicted RBP8.36□□□□□ -1.07
TMEM260-212ENST00000556810 MARK1Q9P0L2 795 aa8.36□□□□□ -1.07
TMEM260-212ENST00000556810 GPC6Q9Y625 555 aaPredicted RBP8.36□□□□□ -1.07
TMEM260-212ENST00000556810 EFSO43281 561 aa8.35□□□□□ -1.07
TMEM260-212ENST00000556810 HOXB4P17483 251 aaPredicted RBP8.35□□□□□ -1.07
TMEM260-212ENST00000556810 SUZ12Q15022 739 aaKnown RBP8.35□□□□□ -1.07
TMEM260-212ENST00000556810 LRRC69Q6ZNQ3 347 aa8.35□□□□□ -1.07
TMEM260-212ENST00000556810 ZNF594Q96JF6 807 aaPredicted RBP8.35□□□□□ -1.07
TMEM260-212ENST00000556810 STRN4Q9NRL3 753 aa8.35□□□□□ -1.07
TMEM260-212ENST00000556810 KLF15Q9UIH9 416 aa8.35□□□□□ -1.07
TMEM260-212ENST00000556810 RBM19Q9Y4C8 960 aaKnown RBP8.35□□□□□ -1.07
TMEM260-212ENST00000556810 ZNF468Q5VIY5 522 aaPredicted RBP8.34□□□□□ -1.07
TMEM260-212ENST00000556810 FCHSD1Q86WN1 690 aa8.34□□□□□ -1.07
TMEM260-212ENST00000556810 RHPN1Q8TCX5 695 aa8.34□□□□□ -1.07
TMEM260-212ENST00000556810 C7orf43Q8WVR3 580 aa8.34□□□□□ -1.07
TMEM260-212ENST00000556810 NEUROD4Q9HD90 331 aa8.34□□□□□ -1.07
TMEM260-212ENST00000556810 TFIP11Q9UBB9 837 aaKnown RBP8.34□□□□□ -1.07
TMEM260-212ENST00000556810 PRR12Q9ULL5 1215 aa8.34□□□□□ -1.07
TMEM260-212ENST00000556810 CHMP3Q9Y3E7 222 aa8.34□□□□□ -1.07
TMEM260-212ENST00000556810 SPHKAPQ2M3C7 1700 aa8.34□□□□□ -1.07
TMEM260-212ENST00000556810 SFI1A8K8P3 1242 aa8.33□□□□□ -1.08
TMEM260-212ENST00000556810 MSTNO14793 375 aa8.33□□□□□ -1.08
TMEM260-212ENST00000556810 DKK1O94907 266 aa8.33□□□□□ -1.08
TMEM260-212ENST00000556810 ITGB2P05107 769 aa8.33□□□□□ -1.08
TMEM260-212ENST00000556810 LINC00114Q6XXX2 140 aa8.33□□□□□ -1.08
TMEM260-212ENST00000556810 TSEN2Q8NCE0 465 aaKnown RBP8.33□□□□□ -1.08
TMEM260-212ENST00000556810 MAFBQ9Y5Q3 323 aaPredicted RBP8.33□□□□□ -1.08
TMEM260-212ENST00000556810 ZNF142P52746 1687 aaPredicted RBP8.33□□□□□ -1.08
TMEM260-212ENST00000556810 PRDM15P57071 1507 aaPredicted RBP8.33□□□□□ -1.08
TMEM260-212ENST00000556810 MYO3AQ8NEV4 1616 aa8.32□□□□□ -1.08
TMEM260-212ENST00000556810 RNF17Q9BXT8 1623 aaKnown RBP8.32□□□□□ -1.08
TMEM260-212ENST00000556810 PLA2R1Q13018 1463 aa8.32□□□□□ -1.08
TMEM260-212ENST00000556810 NEURL4Q96JN8 1562 aa8.32□□□□□ -1.08
TMEM260-212ENST00000556810 CEP170BQ9Y4F5 1589 aaPredicted RBP8.32□□□□□ -1.08
TMEM260-212ENST00000556810 KIF1BO60333 1816 aa8.32□□□□□ -1.08
TMEM260-212ENST00000556810 A6NJR5 290 aa8.32□□□□□ -1.08
TMEM260-212ENST00000556810 RASA1P20936 1047 aa8.32□□□□□ -1.08
TMEM260-212ENST00000556810 COL8A1P27658 744 aa8.32□□□□□ -1.08
TMEM260-212ENST00000556810 HSPA1LP34931 641 aa8.32□□□□□ -1.08
TMEM260-212ENST00000556810 HIRAP54198 1017 aaPredicted RBP8.32□□□□□ -1.08
TMEM260-212ENST00000556810 PCBP4P57723 403 aaKnown RBP8.32□□□□□ -1.08
TMEM260-212ENST00000556810 PIP4K2BP78356 416 aa8.32□□□□□ -1.08
TMEM260-212ENST00000556810 C1orf53Q5VUE5 145 aa8.32□□□□□ -1.08
TMEM260-212ENST00000556810 POTEAQ6S8J7 498 aa8.32□□□□□ -1.08
TMEM260-212ENST00000556810 CHSY3Q70JA7 882 aa8.32□□□□□ -1.08
TMEM260-212ENST00000556810 ALYREFQ86V81 257 aaKnown RBP8.32□□□□□ -1.08
TMEM260-212ENST00000556810 ZC3H13Q5T200 1668 aaKnown RBP8.32□□□□□ -1.08
TMEM260-212ENST00000556810 LMTK2Q8IWU2 1503 aa8.32□□□□□ -1.08
TMEM260-212ENST00000556810 CEP152O94986 1710 aa8.32□□□□□ -1.08
TMEM260-212ENST00000556810 VWDEQ8N2E2 1590 aa8.31□□□□□ -1.08
TMEM260-212ENST00000556810 E9PCH4 1651 aa8.31□□□□□ -1.08
TMEM260-212ENST00000556810 PIK3R2O00459 728 aa8.31□□□□□ -1.08
TMEM260-212ENST00000556810 GNB5O14775 395 aa8.31□□□□□ -1.08
TMEM260-212ENST00000556810 PPP1R12BO60237 982 aaPredicted RBP8.31□□□□□ -1.08
TMEM260-212ENST00000556810 DGKGP49619 791 aa8.31□□□□□ -1.08
TMEM260-212ENST00000556810 GRIN2CQ14957 1233 aa8.31□□□□□ -1.08
TMEM260-212ENST00000556810 DCAF11Q8TEB1 546 aa8.31□□□□□ -1.08
TMEM260-212ENST00000556810 SPOCK3Q9BQ16 436 aa8.31□□□□□ -1.08
TMEM260-212ENST00000556810 SUV39H2Q9H5I1 410 aa8.31□□□□□ -1.08
TMEM260-212ENST00000556810 HCN4Q9Y3Q4 1203 aa8.31□□□□□ -1.08
TMEM260-212ENST00000556810 POLR1AO95602 1720 aaPredicted RBP8.31□□□□□ -1.08
TMEM260-212ENST00000556810 TRPM2O94759 1503 aa8.3□□□□□ -1.08
TMEM260-212ENST00000556810 KRBA1A5PL33 1030 aa8.3□□□□□ -1.08
TMEM260-212ENST00000556810 TOM1O60784 492 aa8.3□□□□□ -1.08
TMEM260-212ENST00000556810 CENPBP07199 599 aaPredicted RBP8.3□□□□□ -1.08
TMEM260-212ENST00000556810 CALR3Q96L12 384 aaKnown RBP8.3□□□□□ -1.08
TMEM260-212ENST00000556810 PHACTR1Q9C0D0 580 aa8.3□□□□□ -1.08
TMEM260-212ENST00000556810 WASHC2CQ9Y4E1 1318 aa8.29□□□□□ -1.08
TMEM260-212ENST00000556810 SEC13P55735 322 aa8.29□□□□□ -1.08
TMEM260-212ENST00000556810 PPP1R12CQ9BZL4 782 aa8.29□□□□□ -1.08
TMEM260-212ENST00000556810 A2ML1A8K2U0 1454 aa8.29□□□□□ -1.08
TMEM260-212ENST00000556810 ATAD2Q6PL18 1390 aa8.28□□□□□ -1.08
TMEM260-212ENST00000556810 ANP32CO43423 234 aa8.28□□□□□ -1.08
TMEM260-212ENST00000556810 C21orf2O43822 256 aa8.28□□□□□ -1.08
TMEM260-212ENST00000556810 PROCP04070 461 aa8.28□□□□□ -1.08
TMEM260-212ENST00000556810 SFSWAPQ12872 951 aaKnown RBP8.28□□□□□ -1.08
TMEM260-212ENST00000556810 LARP1Q6PKG0 1096 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms