RNA–Protein interactions for RNA: ENST00000556674.1

TGFB3-206, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-206ENST00000556674 UBE3BQ7Z3V4 1068 aa20.46■□□□□ 0.87
TGFB3-206ENST00000556674 MPNDQ8N594 471 aa20.46■□□□□ 0.87
TGFB3-206ENST00000556674 SSH1Q8WYL5 1049 aa20.46■□□□□ 0.87
TGFB3-206ENST00000556674 GPR101Q96P66 508 aaPredicted RBP20.46■□□□□ 0.87
TGFB3-206ENST00000556674 PLA2G12BQ9BX93 195 aa20.46■□□□□ 0.87
TGFB3-206ENST00000556674 TSKSQ9UJT2 592 aa20.46■□□□□ 0.87
TGFB3-206ENST00000556674 LRRC37AA6NMS7 1700 aa20.46■□□□□ 0.87
TGFB3-206ENST00000556674 LTBP1Q14766 1721 aa20.46■□□□□ 0.87
TGFB3-206ENST00000556674 RTL9Q8NET4 1388 aa20.46■□□□□ 0.87
TGFB3-206ENST00000556674 MYH3P11055 1940 aa20.45■□□□□ 0.86
TGFB3-206ENST00000556674 F6X3S4 739 aa20.45■□□□□ 0.86
TGFB3-206ENST00000556674 ECE1P42892 770 aa20.45■□□□□ 0.86
TGFB3-206ENST00000556674 CDC5LQ99459 802 aaKnown RBP20.45■□□□□ 0.86
TGFB3-206ENST00000556674 RTFDC1Q9BY42 306 aaPredicted RBP20.45■□□□□ 0.86
TGFB3-206ENST00000556674 GJA3Q9Y6H8 435 aa20.45■□□□□ 0.86
TGFB3-206ENST00000556674 BRPF1P55201 1214 aaPredicted RBP20.44■□□□□ 0.86
TGFB3-206ENST00000556674 CELF1Q92879 486 aaKnown RBP20.44■□□□□ 0.86
TGFB3-206ENST00000556674 SRCIN1Q9C0H9 1055 aa20.44■□□□□ 0.86
TGFB3-206ENST00000556674 SMC4Q9NTJ3 1288 aa20.44■□□□□ 0.86
TGFB3-206ENST00000556674 COL4A5P29400 1685 aa20.44■□□□□ 0.86
TGFB3-206ENST00000556674 CST9Q5W186 159 aa20.43■□□□□ 0.86
TGFB3-206ENST00000556674 TTLL11Q8NHH1 800 aa20.43■□□□□ 0.86
TGFB3-206ENST00000556674 TRAF5O00463 557 aa20.42■□□□□ 0.86
TGFB3-206ENST00000556674 LMOD1P29536 600 aaPredicted RBP20.42■□□□□ 0.86
TGFB3-206ENST00000556674 EPS15P42566 896 aa20.42■□□□□ 0.86
TGFB3-206ENST00000556674 SLC4A10Q6U841 1118 aa20.42■□□□□ 0.86
TGFB3-206ENST00000556674 ANKRD18AQ8IVF6 992 aa20.42■□□□□ 0.86
TGFB3-206ENST00000556674 LARGE2Q8N3Y3 721 aa20.42■□□□□ 0.86
TGFB3-206ENST00000556674 JARID2Q92833 1246 aaPredicted RBP20.42■□□□□ 0.86
TGFB3-206ENST00000556674 GRM8O00222 908 aa20.41■□□□□ 0.86
TGFB3-206ENST00000556674 SCNN1DP51172 638 aa20.41■□□□□ 0.86
TGFB3-206ENST00000556674 CASP7P55210 303 aa20.41■□□□□ 0.86
TGFB3-206ENST00000556674 EIF6P56537 245 aaKnown RBP20.41■□□□□ 0.86
TGFB3-206ENST00000556674 C9orf78Q9NZ63 289 aaPredicted RBP20.41■□□□□ 0.86
TGFB3-206ENST00000556674 ZBED9Q6R2W3 1325 aa20.41■□□□□ 0.86
TGFB3-206ENST00000556674 PPIP5K2O43314 1243 aa20.4■□□□□ 0.86
TGFB3-206ENST00000556674 AOC2O75106 756 aa20.4■□□□□ 0.86
TGFB3-206ENST00000556674 TAF1P21675 1872 aa20.4■□□□□ 0.86
TGFB3-206ENST00000556674 SEC31BQ9NQW1 1179 aa20.4■□□□□ 0.86
TGFB3-206ENST00000556674 TLL2Q9Y6L7 1015 aa20.4■□□□□ 0.86
TGFB3-206ENST00000556674 KIF16BQ96L93 1317 aa20.39■□□□□ 0.85
TGFB3-206ENST00000556674 CSF1RP07333 972 aa20.39■□□□□ 0.85
TGFB3-206ENST00000556674 NIM1KQ8IY84 436 aa20.39■□□□□ 0.85
TGFB3-206ENST00000556674 EYA3Q99504 573 aa20.39■□□□□ 0.85
TGFB3-206ENST00000556674 BCL2L13Q9BXK5 485 aa20.39■□□□□ 0.85
TGFB3-206ENST00000556674 MCOLN1Q9GZU1 580 aa20.39■□□□□ 0.85
TGFB3-206ENST00000556674 NSFL1CQ9UNZ2 370 aaKnown RBP20.39■□□□□ 0.85
TGFB3-206ENST00000556674 TRPM7Q96QT4 1865 aa20.39■□□□□ 0.85
TGFB3-206ENST00000556674 MAP2K2P36507 400 aa20.38■□□□□ 0.85
TGFB3-206ENST00000556674 KIAA2012Q0VF49 1180 aa20.38■□□□□ 0.85
TGFB3-206ENST00000556674 PODXL2Q9NZ53 605 aa20.38■□□□□ 0.85
TGFB3-206ENST00000556674 IGHMBP2P38935 993 aaKnown RBP20.37■□□□□ 0.85
TGFB3-206ENST00000556674 RARSP54136 660 aaKnown RBP20.37■□□□□ 0.85
TGFB3-206ENST00000556674 USP50Q70EL3 339 aaPredicted RBP20.37■□□□□ 0.85
TGFB3-206ENST00000556674 CCDC85AQ96PX6 553 aaPredicted RBP20.37■□□□□ 0.85
TGFB3-206ENST00000556674 API5Q9BZZ5 524 aaKnown RBP20.37■□□□□ 0.85
TGFB3-206ENST00000556674 GREM2Q9H772 168 aa20.37■□□□□ 0.85
TGFB3-206ENST00000556674 BSDC1Q9NW68 430 aaPredicted RBP20.37■□□□□ 0.85
TGFB3-206ENST00000556674 UTYO14607 1347 aa20.36■□□□□ 0.85
TGFB3-206ENST00000556674 AOC3Q16853 763 aa20.36■□□□□ 0.85
TGFB3-206ENST00000556674 ARHGAP45Q92619 1136 aa20.36■□□□□ 0.85
TGFB3-206ENST00000556674 DUOX1Q9NRD9 1551 aa20.36■□□□□ 0.85
TGFB3-206ENST00000556674 XDHP47989 1333 aa20.35■□□□□ 0.85
TGFB3-206ENST00000556674 ITGA6P23229 1130 aa20.35■□□□□ 0.85
TGFB3-206ENST00000556674 CCT4P50991 539 aaKnown RBP20.35■□□□□ 0.85
TGFB3-206ENST00000556674 GPSM2P81274 684 aa20.35■□□□□ 0.85
TGFB3-206ENST00000556674 WASHC4Q2M389 1173 aa20.35■□□□□ 0.85
TGFB3-206ENST00000556674 ANKIB1Q9P2G1 1089 aa20.35■□□□□ 0.85
TGFB3-206ENST00000556674 ZNRF3Q9ULT6 936 aa20.35■□□□□ 0.85
TGFB3-206ENST00000556674 ANKRD18BA2A2Z9 1011 aa20.34■□□□□ 0.85
TGFB3-206ENST00000556674 C6orf229H3BNL8 230 aa20.34■□□□□ 0.85
TGFB3-206ENST00000556674 IPO8O15397 1037 aaKnown RBP20.34■□□□□ 0.85
TGFB3-206ENST00000556674 CA12O43570 354 aa20.34■□□□□ 0.85
TGFB3-206ENST00000556674 IFIT5Q13325 482 aaKnown RBP20.34■□□□□ 0.85
TGFB3-206ENST00000556674 SAPCD2Q86UD0 394 aa20.34■□□□□ 0.85
TGFB3-206ENST00000556674 SLC51AQ86UW1 340 aa20.34■□□□□ 0.85
TGFB3-206ENST00000556674 MPHOSPH8Q99549 860 aa20.34■□□□□ 0.85
TGFB3-206ENST00000556674 GGA1Q9UJY5 639 aa20.34■□□□□ 0.85
TGFB3-206ENST00000556674 COL4A1P02462 1669 aa20.33■□□□□ 0.85
TGFB3-206ENST00000556674 FOXO4P98177 505 aa20.33■□□□□ 0.85
TGFB3-206ENST00000556674 TBC1D16Q8TBP0 767 aa20.33■□□□□ 0.85
TGFB3-206ENST00000556674 NOB1Q9ULX3 412 aaKnown RBP20.33■□□□□ 0.85
TGFB3-206ENST00000556674 HDAC5Q9UQL6 1122 aa20.33■□□□□ 0.85
TGFB3-206ENST00000556674 CASP8AP2Q9UKL3 1982 aa20.32■□□□□ 0.84
TGFB3-206ENST00000556674 ATP2B4P23634 1241 aa20.32■□□□□ 0.84
TGFB3-206ENST00000556674 DGKZQ13574 1117 aa20.32■□□□□ 0.84
TGFB3-206ENST00000556674 CCDC57Q2TAC2 916 aa20.32■□□□□ 0.84
TGFB3-206ENST00000556674 ZC3H12CQ9C0D7 883 aaKnown RBP20.32■□□□□ 0.84
TGFB3-206ENST00000556674 POLLQ9UGP5 575 aa20.32■□□□□ 0.84
TGFB3-206ENST00000556674 UFL1O94874 794 aa20.31■□□□□ 0.84
TGFB3-206ENST00000556674 CELF2O95319 508 aaKnown RBP20.31■□□□□ 0.84
TGFB3-206ENST00000556674 TNIP1Q15025 636 aa20.31■□□□□ 0.84
TGFB3-206ENST00000556674 LMBR1LQ6UX01 489 aa20.31■□□□□ 0.84
TGFB3-206ENST00000556674 ANKRD2Q9GZV1 360 aa20.31■□□□□ 0.84
TGFB3-206ENST00000556674 NBPF7P0C2Y1 421 aaPredicted RBP20.3■□□□□ 0.84
TGFB3-206ENST00000556674 ADARB2Q9NS39 739 aaKnown RBP20.3■□□□□ 0.84
TGFB3-206ENST00000556674 GPRC5DQ9NZD1 345 aa20.3■□□□□ 0.84
TGFB3-206ENST00000556674 MINPP1Q9UNW1 487 aa20.3■□□□□ 0.84
TGFB3-206ENST00000556674 CHMP3Q9Y3E7 222 aa20.3■□□□□ 0.84
TGFB3-206ENST00000556674 HHIPL1Q96JK4 782 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms