RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 EIF6P56537 245 aaKnown RBP13.53□□□□□ -0.24
GABRB3-211ENST00000556636 IFIT5Q13325 482 aaKnown RBP13.53□□□□□ -0.24
GABRB3-211ENST00000556636 INTS3Q68E01 1043 aaKnown RBP13.53□□□□□ -0.24
GABRB3-211ENST00000556636 GPC2Q8N158 579 aa13.53□□□□□ -0.24
GABRB3-211ENST00000556636 ANKRD44Q8N8A2 993 aa13.53□□□□□ -0.24
GABRB3-211ENST00000556636 BICC1Q9H694 974 aaKnown RBP13.53□□□□□ -0.24
GABRB3-211ENST00000556636 ANKIB1Q9P2G1 1089 aa13.53□□□□□ -0.24
GABRB3-211ENST00000556636 GGA1Q9UJY5 639 aa13.53□□□□□ -0.24
GABRB3-211ENST00000556636 LRRC37AA6NMS7 1700 aa13.53□□□□□ -0.24
GABRB3-211ENST00000556636 UFL1O94874 794 aa13.52□□□□□ -0.25
GABRB3-211ENST00000556636 TRIM27P14373 513 aa13.52□□□□□ -0.25
GABRB3-211ENST00000556636 ATP2B4P23634 1241 aa13.52□□□□□ -0.25
GABRB3-211ENST00000556636 IGHMBP2P38935 993 aaKnown RBP13.52□□□□□ -0.25
GABRB3-211ENST00000556636 RBM46Q8TBY0 533 aaKnown RBP13.52□□□□□ -0.25
GABRB3-211ENST00000556636 ZNF594Q96JF6 807 aaPredicted RBP13.52□□□□□ -0.25
GABRB3-211ENST00000556636 KCNQ5Q9NR82 932 aa13.52□□□□□ -0.25
GABRB3-211ENST00000556636 XDHP47989 1333 aa13.52□□□□□ -0.25
GABRB3-211ENST00000556636 KIF16BQ96L93 1317 aa13.52□□□□□ -0.25
GABRB3-211ENST00000556636 TIAM2Q8IVF5 1701 aa13.51□□□□□ -0.25
GABRB3-211ENST00000556636 SCNN1DP51172 638 aa13.51□□□□□ -0.25
GABRB3-211ENST00000556636 DOK7Q18PE1 504 aa13.51□□□□□ -0.25
GABRB3-211ENST00000556636 ATF7IPQ6VMQ6 1270 aa13.51□□□□□ -0.25
GABRB3-211ENST00000556636 EYA3Q99504 573 aa13.51□□□□□ -0.25
GABRB3-211ENST00000556636 MPHOSPH8Q99549 860 aa13.51□□□□□ -0.25
GABRB3-211ENST00000556636 ZC3H12CQ9C0D7 883 aaKnown RBP13.51□□□□□ -0.25
GABRB3-211ENST00000556636 TAF1DQ9H5J8 278 aaPredicted RBP13.51□□□□□ -0.25
GABRB3-211ENST00000556636 DBNDD1Q9H9R9 158 aa13.51□□□□□ -0.25
GABRB3-211ENST00000556636 GJA3Q9Y6H8 435 aa13.51□□□□□ -0.25
GABRB3-211ENST00000556636 LTBP1Q14766 1721 aa13.5□□□□□ -0.25
GABRB3-211ENST00000556636 WDR90Q96KV7 1748 aa13.5□□□□□ -0.25
GABRB3-211ENST00000556636 IPO8O15397 1037 aaKnown RBP13.5□□□□□ -0.25
GABRB3-211ENST00000556636 RAD17O75943 681 aa13.5□□□□□ -0.25
GABRB3-211ENST00000556636 POTEIP0CG38 1075 aa13.5□□□□□ -0.25
GABRB3-211ENST00000556636 POTEJP0CG39 1038 aa13.5□□□□□ -0.25
GABRB3-211ENST00000556636 CHRNDQ07001 517 aa13.5□□□□□ -0.25
GABRB3-211ENST00000556636 CCDC57Q2TAC2 916 aa13.5□□□□□ -0.25
GABRB3-211ENST00000556636 TXNRD3Q86VQ6 643 aa13.5□□□□□ -0.25
GABRB3-211ENST00000556636 FRAT1Q92837 279 aaPredicted RBP13.5□□□□□ -0.25
GABRB3-211ENST00000556636 LEMD3Q9Y2U8 911 aa13.5□□□□□ -0.25
GABRB3-211ENST00000556636 CHMP3Q9Y3E7 222 aa13.5□□□□□ -0.25
GABRB3-211ENST00000556636 SNAP23O00161 211 aa13.49□□□□□ -0.25
GABRB3-211ENST00000556636 CIAPIN1Q6FI81 312 aa13.49□□□□□ -0.25
GABRB3-211ENST00000556636 C16orf71Q8IYS4 520 aaPredicted RBP13.49□□□□□ -0.25
GABRB3-211ENST00000556636 MEIS3Q99687 375 aa13.49□□□□□ -0.25
GABRB3-211ENST00000556636 PUS3Q9BZE2 481 aaKnown RBP13.49□□□□□ -0.25
GABRB3-211ENST00000556636 ANKRD2Q9GZV1 360 aa13.49□□□□□ -0.25
GABRB3-211ENST00000556636 HACL1Q9UJ83 578 aa13.49□□□□□ -0.25
GABRB3-211ENST00000556636 RIPOR2Q9Y4F9 1068 aa13.49□□□□□ -0.25
GABRB3-211ENST00000556636 IRS2Q9Y4H2 1338 aa13.48□□□□□ -0.25
GABRB3-211ENST00000556636 IQCA1LA6NCM1 817 aa13.48□□□□□ -0.25
GABRB3-211ENST00000556636 ECE2O60344 883 aa13.48□□□□□ -0.25
GABRB3-211ENST00000556636 TAF5LO75529 589 aa13.48□□□□□ -0.25
GABRB3-211ENST00000556636 KLRK1P26718 216 aa13.48□□□□□ -0.25
GABRB3-211ENST00000556636 EPS15P42566 896 aa13.48□□□□□ -0.25
GABRB3-211ENST00000556636 RFX5P48382 616 aaPredicted RBP13.48□□□□□ -0.25
GABRB3-211ENST00000556636 FSTL1Q12841 308 aa13.48□□□□□ -0.25
GABRB3-211ENST00000556636 LDHAL6AQ6ZMR3 332 aa13.48□□□□□ -0.25
GABRB3-211ENST00000556636 HELBQ8NG08 1087 aaPredicted RBP13.48□□□□□ -0.25
GABRB3-211ENST00000556636 CLUAP1Q96AJ1 413 aa13.48□□□□□ -0.25
GABRB3-211ENST00000556636 MYH3P11055 1940 aa13.48□□□□□ -0.25
GABRB3-211ENST00000556636 ZNF804BA4D1E1 1349 aa13.47□□□□□ -0.25
GABRB3-211ENST00000556636 PSMD14O00487 310 aa13.47□□□□□ -0.25
GABRB3-211ENST00000556636 EPHX2P34913 555 aa13.47□□□□□ -0.25
GABRB3-211ENST00000556636 TNIP1Q15025 636 aa13.47□□□□□ -0.25
GABRB3-211ENST00000556636 ZKSCAN2Q63HK3 967 aa13.47□□□□□ -0.25
GABRB3-211ENST00000556636 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
GABRB3-211ENST00000556636 VIL1P09327 827 aaKnown RBP13.46□□□□□ -0.25
GABRB3-211ENST00000556636 UBTFL1P0CB47 393 aaPredicted RBP13.46□□□□□ -0.25
GABRB3-211ENST00000556636 RLBP1P12271 317 aa13.46□□□□□ -0.25
GABRB3-211ENST00000556636 GMPSP49915 693 aaPredicted RBP13.46□□□□□ -0.25
GABRB3-211ENST00000556636 LRRC24Q50LG9 513 aa13.46□□□□□ -0.25
GABRB3-211ENST00000556636 C15orf52Q6ZUT6 534 aaKnown RBP13.46□□□□□ -0.25
GABRB3-211ENST00000556636 PODNQ7Z5L7 613 aa13.46□□□□□ -0.25
GABRB3-211ENST00000556636 TMEM57Q8N5G2 664 aa13.46□□□□□ -0.25
GABRB3-211ENST00000556636 SMC1BQ8NDV3 1235 aa13.46□□□□□ -0.25
GABRB3-211ENST00000556636 KLHDC4Q8TBB5 520 aa13.46□□□□□ -0.25
GABRB3-211ENST00000556636 GPRC5DQ9NZD1 345 aa13.46□□□□□ -0.25
GABRB3-211ENST00000556636 MED23Q9ULK4 1368 aa13.45□□□□□ -0.26
GABRB3-211ENST00000556636 SHTN1A0MZ66 631 aa13.45□□□□□ -0.26
GABRB3-211ENST00000556636 HSPA6P17066 643 aa13.45□□□□□ -0.26
GABRB3-211ENST00000556636 PTPN12Q05209 780 aaKnown RBP13.45□□□□□ -0.26
GABRB3-211ENST00000556636 TAF7LQ5H9L4 462 aa13.45□□□□□ -0.26
GABRB3-211ENST00000556636 DPF2Q92785 391 aa13.45□□□□□ -0.26
GABRB3-211ENST00000556636 CNNM1Q9NRU3 951 aa13.45□□□□□ -0.26
GABRB3-211ENST00000556636 LRRFIP2Q9Y608 721 aaKnown RBP13.45□□□□□ -0.26
GABRB3-211ENST00000556636 CHADLQ6NUI6 762 aa13.44□□□□□ -0.26
GABRB3-211ENST00000556636 LDHDQ86WU2 507 aa13.44□□□□□ -0.26
GABRB3-211ENST00000556636 COA1Q9GZY4 146 aa13.44□□□□□ -0.26
GABRB3-211ENST00000556636 CNOT7Q9UIV1 285 aaKnown RBP13.44□□□□□ -0.26
GABRB3-211ENST00000556636 PLIN1O60240 522 aa13.43□□□□□ -0.26
GABRB3-211ENST00000556636 ITGBL1O95965 494 aaPredicted RBP13.43□□□□□ -0.26
GABRB3-211ENST00000556636 GNAI3P08754 354 aa13.43□□□□□ -0.26
GABRB3-211ENST00000556636 LMOD1P29536 600 aaPredicted RBP13.43□□□□□ -0.26
GABRB3-211ENST00000556636 HIRAP54198 1017 aaPredicted RBP13.43□□□□□ -0.26
GABRB3-211ENST00000556636 EAPPQ56P03 285 aaPredicted RBP13.43□□□□□ -0.26
GABRB3-211ENST00000556636 PNMA8AQ86V59 439 aaPredicted RBP13.43□□□□□ -0.26
GABRB3-211ENST00000556636 DZIP1LQ8IYY4 767 aaKnown RBP13.43□□□□□ -0.26
GABRB3-211ENST00000556636 VGLL2Q8N8G2 317 aa13.43□□□□□ -0.26
GABRB3-211ENST00000556636 GMLQ99445 158 aa13.43□□□□□ -0.26
GABRB3-211ENST00000556636 CD209Q9NNX6 404 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms