RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 ADM5C9JUS6 153 aa15.48■□□□□ 0.07
ACTN1-221ENST00000556571 IRS4O14654 1257 aaPredicted RBP15.48■□□□□ 0.07
ACTN1-221ENST00000556571 VIL1P09327 827 aaKnown RBP15.48■□□□□ 0.07
ACTN1-221ENST00000556571 NEUROD2Q15784 382 aa15.48■□□□□ 0.07
ACTN1-221ENST00000556571 KIF4BQ2VIQ3 1234 aa15.48■□□□□ 0.07
ACTN1-221ENST00000556571 SULF1Q8IWU6 871 aa15.48■□□□□ 0.07
ACTN1-221ENST00000556571 HYPKQ9NX55 129 aa15.48■□□□□ 0.07
ACTN1-221ENST00000556571 LAS1LQ9Y4W2 734 aaKnown RBP15.48■□□□□ 0.07
ACTN1-221ENST00000556571 RTL9Q8NET4 1388 aa15.48■□□□□ 0.07
ACTN1-221ENST00000556571 HSP90B1P14625 803 aaKnown RBP15.47■□□□□ 0.07
ACTN1-221ENST00000556571 RNF186Q9NXI6 227 aa15.47■□□□□ 0.07
ACTN1-221ENST00000556571 PODXL2Q9NZ53 605 aa15.47■□□□□ 0.07
ACTN1-221ENST00000556571 LRRC37AA6NMS7 1700 aa15.46■□□□□ 0.07
ACTN1-221ENST00000556571 G3V3G9 751 aa15.46■□□□□ 0.07
ACTN1-221ENST00000556571 TRPA1O75762 1119 aa15.46■□□□□ 0.07
ACTN1-221ENST00000556571 RTL5Q5HYW3 569 aaPredicted RBP15.46■□□□□ 0.07
ACTN1-221ENST00000556571 DCAF8Q5TAQ9 597 aa15.46■□□□□ 0.07
ACTN1-221ENST00000556571 REM2Q8IYK8 340 aaPredicted RBP15.46■□□□□ 0.07
ACTN1-221ENST00000556571 GGA3Q9NZ52 723 aa15.46■□□□□ 0.07
ACTN1-221ENST00000556571 TAF1P21675 1872 aa15.46■□□□□ 0.06
ACTN1-221ENST00000556571 SLC10A3P09131 477 aa15.45■□□□□ 0.06
ACTN1-221ENST00000556571 AGBL3Q8NEM8 1001 aa15.45■□□□□ 0.06
ACTN1-221ENST00000556571 CSRNP1Q96S65 589 aa15.45■□□□□ 0.06
ACTN1-221ENST00000556571 PCDH10Q9P2E7 1040 aa15.45■□□□□ 0.06
ACTN1-221ENST00000556571 ANKIB1Q9P2G1 1089 aa15.45■□□□□ 0.06
ACTN1-221ENST00000556571 TRIM35Q9UPQ4 493 aa15.45■□□□□ 0.06
ACTN1-221ENST00000556571 UFL1O94874 794 aa15.44■□□□□ 0.06
ACTN1-221ENST00000556571 ZNF280AP59817 542 aaPredicted RBP15.44■□□□□ 0.06
ACTN1-221ENST00000556571 FKBP1BP68106 108 aa15.44■□□□□ 0.06
ACTN1-221ENST00000556571 CCDC146Q8IYE0 955 aa15.44■□□□□ 0.06
ACTN1-221ENST00000556571 ZBTB38Q8NAP3 1195 aaPredicted RBP15.44■□□□□ 0.06
ACTN1-221ENST00000556571 RUNDC1Q96C34 613 aa15.44■□□□□ 0.06
ACTN1-221ENST00000556571 CDCA5Q96FF9 252 aa15.44■□□□□ 0.06
ACTN1-221ENST00000556571 GGA1Q9UJY5 639 aa15.44■□□□□ 0.06
ACTN1-221ENST00000556571 SCARF1Q14162 830 aa15.43■□□□□ 0.06
ACTN1-221ENST00000556571 DUSP27Q5VZP5 1158 aa15.43■□□□□ 0.06
ACTN1-221ENST00000556571 RSBN1LQ6PCB5 846 aaPredicted RBP15.43■□□□□ 0.06
ACTN1-221ENST00000556571 RIC3Q7Z5B4 369 aa15.43■□□□□ 0.06
ACTN1-221ENST00000556571 SEC31BQ9NQW1 1179 aa15.43■□□□□ 0.06
ACTN1-221ENST00000556571 POLR2AP24928 1970 aaKnown RBP15.43■□□□□ 0.06
ACTN1-221ENST00000556571 ASTN2O75129 1339 aaPredicted RBP15.43■□□□□ 0.06
ACTN1-221ENST00000556571 GOLGA2Q08379 1002 aa15.42■□□□□ 0.06
ACTN1-221ENST00000556571 CCDC152Q4G0S7 254 aa15.42■□□□□ 0.06
ACTN1-221ENST00000556571 ANGEL2Q5VTE6 544 aaKnown RBP15.42■□□□□ 0.06
ACTN1-221ENST00000556571 CTU1Q7Z7A3 348 aaKnown RBP15.42■□□□□ 0.06
ACTN1-221ENST00000556571 DDX60Q8IY21 1712 aaKnown RBP15.42■□□□□ 0.06
ACTN1-221ENST00000556571 USP17L8P0C7I0 530 aa15.41■□□□□ 0.06
ACTN1-221ENST00000556571 ZNF609O15014 1411 aa15.41■□□□□ 0.06
ACTN1-221ENST00000556571 PCCAP05165 728 aaPredicted RBP15.4■□□□□ 0.06
ACTN1-221ENST00000556571 SOX10P56693 466 aa15.4■□□□□ 0.06
ACTN1-221ENST00000556571 WDR43Q15061 677 aaKnown RBP eCLIP15.4■□□□□ 0.06
ACTN1-221ENST00000556571 RASAL3Q86YV0 1011 aa15.4■□□□□ 0.06
ACTN1-221ENST00000556571 CCDC191Q8NCU4 936 aa15.4■□□□□ 0.06
ACTN1-221ENST00000556571 GMLQ99445 158 aa15.4■□□□□ 0.06
ACTN1-221ENST00000556571 MYOZ2Q9NPC6 264 aa15.4■□□□□ 0.06
ACTN1-221ENST00000556571 PITPNM2Q9BZ72 1349 aa15.4■□□□□ 0.06
ACTN1-221ENST00000556571 COL4A1P02462 1669 aa15.39■□□□□ 0.05
ACTN1-221ENST00000556571 PDE8AO60658 829 aa15.39■□□□□ 0.05
ACTN1-221ENST00000556571 PODNQ7Z5L7 613 aa15.39■□□□□ 0.05
ACTN1-221ENST00000556571 MYD88Q99836 296 aa15.39■□□□□ 0.05
ACTN1-221ENST00000556571 MBIPQ9NS73 344 aa15.39■□□□□ 0.05
ACTN1-221ENST00000556571 XDHP47989 1333 aa15.39■□□□□ 0.05
ACTN1-221ENST00000556571 MYBBP1AQ9BQG0 1328 aaKnown RBP15.39■□□□□ 0.05
ACTN1-221ENST00000556571 USP17L3A6NCW0 530 aa15.38■□□□□ 0.05
ACTN1-221ENST00000556571 USP17L4A6NCW7 530 aa15.38■□□□□ 0.05
ACTN1-221ENST00000556571 ATP2B4P23634 1241 aa15.38■□□□□ 0.05
ACTN1-221ENST00000556571 PKN2Q16513 984 aaKnown RBP15.38■□□□□ 0.05
ACTN1-221ENST00000556571 USP17L1Q7RTZ2 530 aa15.38■□□□□ 0.05
ACTN1-221ENST00000556571 ANKRD18AQ8IVF6 992 aa15.38■□□□□ 0.05
ACTN1-221ENST00000556571 PHAXQ9H814 394 aaKnown RBP15.38■□□□□ 0.05
ACTN1-221ENST00000556571 CWC25Q9NXE8 425 aaPredicted RBP15.38■□□□□ 0.05
ACTN1-221ENST00000556571 SCN9AQ15858 1988 aa15.37■□□□□ 0.05
ACTN1-221ENST00000556571 ADAMTS8Q9UP79 889 aa15.37■□□□□ 0.05
ACTN1-221ENST00000556571 TNRC18O15417 2968 aaPredicted RBP15.37■□□□□ 0.05
ACTN1-221ENST00000556571 ZNF853P0CG23 659 aa15.36■□□□□ 0.05
ACTN1-221ENST00000556571 CCDC85AQ96PX6 553 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-221ENST00000556571 CDC5LQ99459 802 aaKnown RBP15.36■□□□□ 0.05
ACTN1-221ENST00000556571 CHMP4AQ9BY43 222 aa15.36■□□□□ 0.05
ACTN1-221ENST00000556571 HDAC9Q9UKV0 1011 aa15.36■□□□□ 0.05
ACTN1-221ENST00000556571 AKAP11Q9UKA4 1901 aa15.36■□□□□ 0.05
ACTN1-221ENST00000556571 UBE2Q2LH0YL09 131 aa15.35■□□□□ 0.05
ACTN1-221ENST00000556571 DDX58O95786 925 aaKnown RBP15.35■□□□□ 0.05
ACTN1-221ENST00000556571 OGFOD1Q8N543 542 aa15.35■□□□□ 0.05
ACTN1-221ENST00000556571 JARID2Q92833 1246 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-221ENST00000556571 METTL22Q9BUU2 404 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-221ENST00000556571 IFT57Q9NWB7 429 aa15.35■□□□□ 0.05
ACTN1-221ENST00000556571 HPS5Q9UPZ3 1129 aa15.35■□□□□ 0.05
ACTN1-221ENST00000556571 ELL2O00472 640 aaPredicted RBP15.34■□□□□ 0.05
ACTN1-221ENST00000556571 TM4SF4P48230 202 aa15.34■□□□□ 0.05
ACTN1-221ENST00000556571 GNAI1P63096 354 aa15.34■□□□□ 0.05
ACTN1-221ENST00000556571 CALD1Q05682 793 aaKnown RBP15.34■□□□□ 0.05
ACTN1-221ENST00000556571 NBPF9Q3BBW0 867 aa15.34■□□□□ 0.05
ACTN1-221ENST00000556571 MOB2Q70IA6 237 aa15.34■□□□□ 0.05
ACTN1-221ENST00000556571 ZNF296Q8WUU4 475 aaPredicted RBP15.34■□□□□ 0.05
ACTN1-221ENST00000556571 TBC1D8O95759 1140 aa15.33■□□□□ 0.04
ACTN1-221ENST00000556571 NF2P35240 595 aa15.33■□□□□ 0.04
ACTN1-221ENST00000556571 MMP14P50281 582 aa15.33■□□□□ 0.04
ACTN1-221ENST00000556571 TTLL12Q14166 644 aaPredicted RBP15.33■□□□□ 0.04
ACTN1-221ENST00000556571 NOM1Q5C9Z4 860 aaKnown RBP15.33■□□□□ 0.04
ACTN1-221ENST00000556571 PRPF38BQ5VTL8 546 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms