RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 KAZALD1Q96I82 304 aa10.3□□□□□ -0.76
VTI1B-206ENST00000556461 CDC5LQ99459 802 aaKnown RBP10.3□□□□□ -0.76
VTI1B-206ENST00000556461 MINPP1Q9UNW1 487 aa10.3□□□□□ -0.76
VTI1B-206ENST00000556461 PCNTO95613 3336 aa10.3□□□□□ -0.76
VTI1B-206ENST00000556461 GRM8O00222 908 aa10.29□□□□□ -0.76
VTI1B-206ENST00000556461 ALDH1L1O75891 902 aa10.29□□□□□ -0.76
VTI1B-206ENST00000556461 NBPF7P0C2Y1 421 aaPredicted RBP10.29□□□□□ -0.76
VTI1B-206ENST00000556461 GMPSP49915 693 aaPredicted RBP10.29□□□□□ -0.76
VTI1B-206ENST00000556461 APLP1P51693 650 aa10.29□□□□□ -0.76
VTI1B-206ENST00000556461 CHADLQ6NUI6 762 aa10.29□□□□□ -0.76
VTI1B-206ENST00000556461 DNAJC5GQ8N7S2 189 aa10.29□□□□□ -0.76
VTI1B-206ENST00000556461 SUCLG2Q96I99 432 aa10.29□□□□□ -0.76
VTI1B-206ENST00000556461 SRCIN1Q9C0H9 1055 aa10.29□□□□□ -0.76
VTI1B-206ENST00000556461 SMC4Q9NTJ3 1288 aa10.29□□□□□ -0.76
VTI1B-206ENST00000556461 BSDC1Q9NW68 430 aaPredicted RBP10.29□□□□□ -0.76
VTI1B-206ENST00000556461 ANKIB1Q9P2G1 1089 aa10.29□□□□□ -0.76
VTI1B-206ENST00000556461 GGA1Q9UJY5 639 aa10.29□□□□□ -0.76
VTI1B-206ENST00000556461 ECE2O60344 883 aa10.28□□□□□ -0.76
VTI1B-206ENST00000556461 ALDH1L2Q3SY69 923 aa10.28□□□□□ -0.76
VTI1B-206ENST00000556461 CIAPIN1Q6FI81 312 aa10.28□□□□□ -0.76
VTI1B-206ENST00000556461 LMBR1LQ6UX01 489 aa10.28□□□□□ -0.76
VTI1B-206ENST00000556461 LDHDQ86WU2 507 aa10.28□□□□□ -0.76
VTI1B-206ENST00000556461 ZNF594Q96JF6 807 aaPredicted RBP10.28□□□□□ -0.76
VTI1B-206ENST00000556461 EYA3Q99504 573 aa10.28□□□□□ -0.76
VTI1B-206ENST00000556461 GPRC5DQ9NZD1 345 aa10.28□□□□□ -0.76
VTI1B-206ENST00000556461 ZBTB12Q9Y330 459 aaPredicted RBP10.28□□□□□ -0.76
VTI1B-206ENST00000556461 PTPRCP08575 1304 aa10.28□□□□□ -0.76
VTI1B-206ENST00000556461 XDHP47989 1333 aa10.28□□□□□ -0.76
VTI1B-206ENST00000556461 SCN4AP35499 1836 aa10.28□□□□□ -0.76
VTI1B-206ENST00000556461 MYH3P11055 1940 aa10.27□□□□□ -0.76
VTI1B-206ENST00000556461 ADAMTSL1Q8N6G6 1762 aa10.27□□□□□ -0.77
VTI1B-206ENST00000556461 SNAP23O00161 211 aa10.27□□□□□ -0.77
VTI1B-206ENST00000556461 PSMD14O00487 310 aa10.27□□□□□ -0.77
VTI1B-206ENST00000556461 ATP2B4P23634 1241 aa10.27□□□□□ -0.77
VTI1B-206ENST00000556461 KLRK1P26718 216 aa10.27□□□□□ -0.77
VTI1B-206ENST00000556461 IGHMBP2P38935 993 aaKnown RBP10.27□□□□□ -0.77
VTI1B-206ENST00000556461 RARSP54136 660 aaKnown RBP10.27□□□□□ -0.77
VTI1B-206ENST00000556461 HNRNPUQ00839 825 aaKnown RBP eCLIP10.27□□□□□ -0.77
VTI1B-206ENST00000556461 MAP1SQ66K74 1059 aaPredicted RBP10.27□□□□□ -0.77
VTI1B-206ENST00000556461 TXNRD3Q86VQ6 643 aa10.27□□□□□ -0.77
VTI1B-206ENST00000556461 ZC3H12CQ9C0D7 883 aaKnown RBP10.27□□□□□ -0.77
VTI1B-206ENST00000556461 C9orf78Q9NZ63 289 aaPredicted RBP10.27□□□□□ -0.77
VTI1B-206ENST00000556461 NOB1Q9ULX3 412 aaKnown RBP10.27□□□□□ -0.77
VTI1B-206ENST00000556461 CLEC11AQ9Y240 323 aa10.27□□□□□ -0.77
VTI1B-206ENST00000556461 CHMP3Q9Y3E7 222 aa10.27□□□□□ -0.77
VTI1B-206ENST00000556461 UTYO14607 1347 aa10.27□□□□□ -0.77
VTI1B-206ENST00000556461 SPEF2Q9C093 1822 aa10.26□□□□□ -0.77
VTI1B-206ENST00000556461 ANKRD18BA2A2Z9 1011 aa10.26□□□□□ -0.77
VTI1B-206ENST00000556461 ITGBL1O95965 494 aaPredicted RBP10.26□□□□□ -0.77
VTI1B-206ENST00000556461 LMOD1P29536 600 aaPredicted RBP10.26□□□□□ -0.77
VTI1B-206ENST00000556461 CCT4P50991 539 aaKnown RBP10.26□□□□□ -0.77
VTI1B-206ENST00000556461 FMR1Q06787 632 aaKnown RBP eCLIP10.26□□□□□ -0.77
VTI1B-206ENST00000556461 TNIP1Q15025 636 aa10.26□□□□□ -0.77
VTI1B-206ENST00000556461 TRPM4Q8TD43 1214 aa10.26□□□□□ -0.77
VTI1B-206ENST00000556461 SCN9AQ15858 1988 aa10.26□□□□□ -0.77
VTI1B-206ENST00000556461 PASKQ96RG2 1323 aa10.26□□□□□ -0.77
VTI1B-206ENST00000556461 TAF5LO75529 589 aa10.25□□□□□ -0.77
VTI1B-206ENST00000556461 EGFRP00533 1210 aa10.25□□□□□ -0.77
VTI1B-206ENST00000556461 CT47B1P0C2W7 299 aaPredicted RBP10.25□□□□□ -0.77
VTI1B-206ENST00000556461 HIRAP54198 1017 aaPredicted RBP10.25□□□□□ -0.77
VTI1B-206ENST00000556461 CHRNDQ07001 517 aa10.25□□□□□ -0.77
VTI1B-206ENST00000556461 IFIT5Q13325 482 aaKnown RBP10.25□□□□□ -0.77
VTI1B-206ENST00000556461 PNMA8AQ86V59 439 aaPredicted RBP10.25□□□□□ -0.77
VTI1B-206ENST00000556461 CNTROBQ8N137 903 aa10.25□□□□□ -0.77
VTI1B-206ENST00000556461 ANKRD44Q8N8A2 993 aa10.25□□□□□ -0.77
VTI1B-206ENST00000556461 HELBQ8NG08 1087 aaPredicted RBP10.25□□□□□ -0.77
VTI1B-206ENST00000556461 MPHOSPH8Q99549 860 aa10.25□□□□□ -0.77
VTI1B-206ENST00000556461 USP44Q9H0E7 712 aa10.25□□□□□ -0.77
VTI1B-206ENST00000556461 BICC1Q9H694 974 aaKnown RBP10.25□□□□□ -0.77
VTI1B-206ENST00000556461 ADARB2Q9NS39 739 aaKnown RBP10.25□□□□□ -0.77
VTI1B-206ENST00000556461 CNOT7Q9UIV1 285 aaKnown RBP10.25□□□□□ -0.77
VTI1B-206ENST00000556461 TNNQ9UQP3 1299 aa10.25□□□□□ -0.77
VTI1B-206ENST00000556461 BCAR3O75815 825 aa10.24□□□□□ -0.77
VTI1B-206ENST00000556461 BRPF1P55201 1214 aaPredicted RBP10.24□□□□□ -0.77
VTI1B-206ENST00000556461 RABL6Q3YEC7 729 aaPredicted RBP10.24□□□□□ -0.77
VTI1B-206ENST00000556461 USP50Q70EL3 339 aaPredicted RBP10.24□□□□□ -0.77
VTI1B-206ENST00000556461 MICALL2Q8IY33 904 aa10.24□□□□□ -0.77
VTI1B-206ENST00000556461 MXD3Q9BW11 206 aa10.24□□□□□ -0.77
VTI1B-206ENST00000556461 PUS3Q9BZE2 481 aaKnown RBP10.24□□□□□ -0.77
VTI1B-206ENST00000556461 ZNF804BA4D1E1 1349 aa10.24□□□□□ -0.77
VTI1B-206ENST00000556461 IRS2Q9Y4H2 1338 aa10.24□□□□□ -0.77
VTI1B-206ENST00000556461 MED23Q9ULK4 1368 aa10.24□□□□□ -0.77
VTI1B-206ENST00000556461 TRAF5O00463 557 aa10.23□□□□□ -0.77
VTI1B-206ENST00000556461 VIL1P09327 827 aaKnown RBP10.23□□□□□ -0.77
VTI1B-206ENST00000556461 CCDC57Q2TAC2 916 aa10.23□□□□□ -0.77
VTI1B-206ENST00000556461 SAMD7Q7Z3H4 446 aa10.23□□□□□ -0.77
VTI1B-206ENST00000556461 DPF2Q92785 391 aa10.23□□□□□ -0.77
VTI1B-206ENST00000556461 KLRG1Q96E93 195 aa10.23□□□□□ -0.77
VTI1B-206ENST00000556461 ANKRD2Q9GZV1 360 aa10.23□□□□□ -0.77
VTI1B-206ENST00000556461 LEMD3Q9Y2U8 911 aa10.23□□□□□ -0.77
VTI1B-206ENST00000556461 G3V3G9 751 aa10.22□□□□□ -0.77
VTI1B-206ENST00000556461 PLIN1O60240 522 aa10.22□□□□□ -0.77
VTI1B-206ENST00000556461 TBC1D10BQ4KMP7 808 aaPredicted RBP10.22□□□□□ -0.77
VTI1B-206ENST00000556461 TAF7LQ5H9L4 462 aa10.22□□□□□ -0.77
VTI1B-206ENST00000556461 DCAF8Q5TAQ9 597 aa10.22□□□□□ -0.77
VTI1B-206ENST00000556461 RSBN1LQ6PCB5 846 aaPredicted RBP10.22□□□□□ -0.77
VTI1B-206ENST00000556461 DLK2Q6UY11 383 aa10.22□□□□□ -0.77
VTI1B-206ENST00000556461 LDHAL6AQ6ZMR3 332 aa10.22□□□□□ -0.77
VTI1B-206ENST00000556461 KLHDC4Q8TBB5 520 aa10.22□□□□□ -0.77
VTI1B-206ENST00000556461 GMLQ99445 158 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms