RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 CCDC196A0A1B0GTZ2 297 aa17.34■□□□□ 0.37
ARHGEF40-207ENST00000556399 FAM160A1Q05DH4 1040 aa17.34■□□□□ 0.37
ARHGEF40-207ENST00000556399 UNC5CLQ8IV45 518 aa17.34■□□□□ 0.37
ARHGEF40-207ENST00000556399 TM6SF1Q9BZW5 370 aa17.34■□□□□ 0.37
ARHGEF40-207ENST00000556399 GNL3LQ9NVN8 582 aaKnown RBP17.34■□□□□ 0.37
ARHGEF40-207ENST00000556399 BABAM1Q9NWV8 329 aa17.34■□□□□ 0.37
ARHGEF40-207ENST00000556399 CWC25Q9NXE8 425 aaPredicted RBP17.34■□□□□ 0.37
ARHGEF40-207ENST00000556399 LRP2BPQ9P2M1 347 aa17.34■□□□□ 0.37
ARHGEF40-207ENST00000556399 SBNO1A3KN83 1393 aa17.34■□□□□ 0.37
ARHGEF40-207ENST00000556399 TUBB4AP04350 444 aa17.34■□□□□ 0.37
ARHGEF40-207ENST00000556399 EIF5P55010 431 aaKnown RBP17.34■□□□□ 0.37
ARHGEF40-207ENST00000556399 LMBR1LQ6UX01 489 aa17.34■□□□□ 0.37
ARHGEF40-207ENST00000556399 SNRPA1P09661 255 aaKnown RBP17.34■□□□□ 0.37
ARHGEF40-207ENST00000556399 LRRC59Q96AG4 307 aaKnown RBP17.33■□□□□ 0.37
ARHGEF40-207ENST00000556399 ERO1AQ96HE7 468 aa17.33■□□□□ 0.37
ARHGEF40-207ENST00000556399 TFCP2Q12800 502 aa17.33■□□□□ 0.37
ARHGEF40-207ENST00000556399 ALG1Q9BT22 464 aa17.33■□□□□ 0.37
ARHGEF40-207ENST00000556399 PAG1Q9NWQ8 432 aa17.33■□□□□ 0.37
ARHGEF40-207ENST00000556399 A0A1B0GVL5 298 aa17.33■□□□□ 0.36
ARHGEF40-207ENST00000556399 LIG1P18858 919 aa17.33■□□□□ 0.36
ARHGEF40-207ENST00000556399 IQCEQ6IPM2 695 aa17.33■□□□□ 0.36
ARHGEF40-207ENST00000556399 CDK5RAP3Q96JB5 506 aa17.33■□□□□ 0.36
ARHGEF40-207ENST00000556399 KIF2CQ99661 725 aa17.33■□□□□ 0.36
ARHGEF40-207ENST00000556399 TRIM34Q9BYJ4 488 aa17.33■□□□□ 0.36
ARHGEF40-207ENST00000556399 MAP3K4Q9Y6R4 1608 aa17.33■□□□□ 0.36
ARHGEF40-207ENST00000556399 G3V3G9 751 aa17.33■□□□□ 0.36
ARHGEF40-207ENST00000556399 TMEM67Q5HYA8 995 aa17.33■□□□□ 0.36
ARHGEF40-207ENST00000556399 DCAF8Q5TAQ9 597 aa17.33■□□□□ 0.36
ARHGEF40-207ENST00000556399 CRACR2AQ9BSW2 395 aa17.33■□□□□ 0.36
ARHGEF40-207ENST00000556399 LAMC1P11047 1609 aa17.33■□□□□ 0.36
ARHGEF40-207ENST00000556399 LMAN1P49257 510 aa17.32■□□□□ 0.36
ARHGEF40-207ENST00000556399 PTH1RQ03431 593 aa17.32■□□□□ 0.36
ARHGEF40-207ENST00000556399 STAP2Q9UGK3 403 aa17.32■□□□□ 0.36
ARHGEF40-207ENST00000556399 SRRTQ9BXP5 876 aaKnown RBP17.32■□□□□ 0.36
ARHGEF40-207ENST00000556399 KIF20AO95235 890 aa17.32■□□□□ 0.36
ARHGEF40-207ENST00000556399 CCDC129Q6ZRS4 1044 aa17.32■□□□□ 0.36
ARHGEF40-207ENST00000556399 NUP88Q99567 741 aaPredicted RBP17.32■□□□□ 0.36
ARHGEF40-207ENST00000556399 SLC26A6Q9BXS9 759 aa17.32■□□□□ 0.36
ARHGEF40-207ENST00000556399 ARFGAP3Q9NP61 516 aa17.32■□□□□ 0.36
ARHGEF40-207ENST00000556399 RAI14Q9P0K7 980 aa17.31■□□□□ 0.36
ARHGEF40-207ENST00000556399 POTEB2H3BUK9 544 aa17.31■□□□□ 0.36
ARHGEF40-207ENST00000556399 ATL3Q6DD88 541 aa17.31■□□□□ 0.36
ARHGEF40-207ENST00000556399 IFNL2Q8IZJ0 200 aa17.31■□□□□ 0.36
ARHGEF40-207ENST00000556399 MINDY4BA8MYZ0 360 aa17.31■□□□□ 0.36
ARHGEF40-207ENST00000556399 PRC1O43663 620 aa17.31■□□□□ 0.36
ARHGEF40-207ENST00000556399 RASEFQ8IZ41 740 aa17.31■□□□□ 0.36
ARHGEF40-207ENST00000556399 JAK2O60674 1132 aa17.31■□□□□ 0.36
ARHGEF40-207ENST00000556399 PRDM11Q9NQV5 511 aa17.31■□□□□ 0.36
ARHGEF40-207ENST00000556399 TET3O43151 1660 aa17.31■□□□□ 0.36
ARHGEF40-207ENST00000556399 LRMPQ12912 555 aa17.3■□□□□ 0.36
ARHGEF40-207ENST00000556399 KLHDC4Q8TBB5 520 aa17.3■□□□□ 0.36
ARHGEF40-207ENST00000556399 PYCARDQ9ULZ3 195 aa17.3■□□□□ 0.36
ARHGEF40-207ENST00000556399 CLEC17AQ6ZS10 378 aa17.3■□□□□ 0.36
ARHGEF40-207ENST00000556399 ARHGEF10O15013 1369 aa17.3■□□□□ 0.36
ARHGEF40-207ENST00000556399 MAP3K12Q12852 859 aa17.3■□□□□ 0.36
ARHGEF40-207ENST00000556399 MAP9Q49MG5 647 aa17.3■□□□□ 0.36
ARHGEF40-207ENST00000556399 KIAA0754O94854 1291 aa17.29■□□□□ 0.36
ARHGEF40-207ENST00000556399 ZFYP08048 801 aaPredicted RBP17.29■□□□□ 0.36
ARHGEF40-207ENST00000556399 HOXB7P09629 217 aa17.29■□□□□ 0.36
ARHGEF40-207ENST00000556399 ABCF2Q9UG63 623 aa17.29■□□□□ 0.36
ARHGEF40-207ENST00000556399 AATKQ6ZMQ8 1374 aa17.29■□□□□ 0.36
ARHGEF40-207ENST00000556399 TTC6Q86TZ1 520 aa17.29■□□□□ 0.36
ARHGEF40-207ENST00000556399 TXLNBQ8N3L3 684 aa17.29■□□□□ 0.36
ARHGEF40-207ENST00000556399 LSG1Q9H089 658 aaKnown RBP17.29■□□□□ 0.36
ARHGEF40-207ENST00000556399 ZSWIM6Q9HCJ5 1215 aa17.29■□□□□ 0.36
ARHGEF40-207ENST00000556399 PATL2C9JE40 543 aaKnown RBP17.29■□□□□ 0.36
ARHGEF40-207ENST00000556399 ELF2Q15723 593 aa17.29■□□□□ 0.36
ARHGEF40-207ENST00000556399 TANGO6Q9C0B7 1094 aa17.29■□□□□ 0.36
ARHGEF40-207ENST00000556399 TPCN1Q9ULQ1 816 aa17.29■□□□□ 0.36
ARHGEF40-207ENST00000556399 IL15P40933 162 aaPredicted RBP17.29■□□□□ 0.36
ARHGEF40-207ENST00000556399 KANK3Q6NY19 840 aa17.29■□□□□ 0.36
ARHGEF40-207ENST00000556399 GTF3C6Q969F1 213 aa17.28■□□□□ 0.36
ARHGEF40-207ENST00000556399 ZBTB43O43298 467 aa17.28■□□□□ 0.36
ARHGEF40-207ENST00000556399 LGR6Q9HBX8 967 aa17.28■□□□□ 0.36
ARHGEF40-207ENST00000556399 LLPHQ9BRT6 129 aaKnown RBP17.28■□□□□ 0.36
ARHGEF40-207ENST00000556399 RNF113AO15541 343 aaKnown RBP17.28■□□□□ 0.36
ARHGEF40-207ENST00000556399 YEATS4O95619 227 aa17.28■□□□□ 0.36
ARHGEF40-207ENST00000556399 BRAPQ7Z569 592 aa17.28■□□□□ 0.36
ARHGEF40-207ENST00000556399 NR1I2O75469 434 aa17.27■□□□□ 0.36
ARHGEF40-207ENST00000556399 LDHAL6AQ6ZMR3 332 aa17.27■□□□□ 0.36
ARHGEF40-207ENST00000556399 UTP14AQ9BVJ6 771 aaKnown RBP17.27■□□□□ 0.36
ARHGEF40-207ENST00000556399 NCOA5Q9HCD5 579 aaKnown RBP17.27■□□□□ 0.36
ARHGEF40-207ENST00000556399 LUC7LQ9NQ29 371 aaKnown RBP17.27■□□□□ 0.36
ARHGEF40-207ENST00000556399 DDX21Q9NR30 783 aaKnown RBP eCLIP17.27■□□□□ 0.36
ARHGEF40-207ENST00000556399 RNMTO43148 476 aaKnown RBP17.27■□□□□ 0.36
ARHGEF40-207ENST00000556399 RDXP35241 583 aaKnown RBP17.27■□□□□ 0.36
ARHGEF40-207ENST00000556399 ZFYVE16Q7Z3T8 1539 aa17.27■□□□□ 0.36
ARHGEF40-207ENST00000556399 STARD3NLO95772 234 aa17.27■□□□□ 0.35
ARHGEF40-207ENST00000556399 TTF1Q15361 905 aaPredicted RBP17.27■□□□□ 0.35
ARHGEF40-207ENST00000556399 SUCLG2Q96I99 432 aa17.27■□□□□ 0.35
ARHGEF40-207ENST00000556399 MCM3P25205 808 aa17.26■□□□□ 0.35
ARHGEF40-207ENST00000556399 GOLGA6L10A6NI86 522 aa17.26■□□□□ 0.35
ARHGEF40-207ENST00000556399 GABPB1Q06547 395 aaPredicted RBP17.26■□□□□ 0.35
ARHGEF40-207ENST00000556399 PDLIM2Q96JY6 352 aa17.26■□□□□ 0.35
ARHGEF40-207ENST00000556399 ADCK5Q3MIX3 580 aa17.26■□□□□ 0.35
ARHGEF40-207ENST00000556399 ANKRD18BA2A2Z9 1011 aa17.26■□□□□ 0.35
ARHGEF40-207ENST00000556399 MCM6Q14566 821 aa17.26■□□□□ 0.35
ARHGEF40-207ENST00000556399 TNNI3KQ59H18 835 aa17.26■□□□□ 0.35
ARHGEF40-207ENST00000556399 FPGT-TNNI3KV9GXZ4 949 aa17.26■□□□□ 0.35
ARHGEF40-207ENST00000556399 AEBP2Q6ZN18 517 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms