RNA–Protein interactions for RNA: ENST00000556356.1

LRP1-211, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 5,114 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-211ENST00000556356 TRAF1Q13077 416 aa17.8■□□□□ 0.44
LRP1-211ENST00000556356 PDILTQ8N807 584 aa17.8■□□□□ 0.44
LRP1-211ENST00000556356 IL27Q8NEV9 243 aa17.8■□□□□ 0.44
LRP1-211ENST00000556356 TSPY26PQ9H489 355 aa17.8■□□□□ 0.44
LRP1-211ENST00000556356 GJA3Q9Y6H8 435 aa17.79■□□□□ 0.44
LRP1-211ENST00000556356 A0A1B0GUL7 405 aa17.79■□□□□ 0.44
LRP1-211ENST00000556356 LMTK2Q8IWU2 1503 aa17.79■□□□□ 0.44
LRP1-211ENST00000556356 NAP1L1P55209 391 aaKnown RBP17.79■□□□□ 0.44
LRP1-211ENST00000556356 CCDC24Q8N4L8 307 aa17.79■□□□□ 0.44
LRP1-211ENST00000556356 RNF214Q8ND24 703 aa17.79■□□□□ 0.44
LRP1-211ENST00000556356 NMIQ13287 307 aaPredicted RBP17.79■□□□□ 0.44
LRP1-211ENST00000556356 HOMER1Q86YM7 354 aa17.79■□□□□ 0.44
LRP1-211ENST00000556356 SEPT12Q8IYM1 358 aa17.79■□□□□ 0.44
LRP1-211ENST00000556356 LARGE2Q8N3Y3 721 aa17.79■□□□□ 0.44
LRP1-211ENST00000556356 ESYT1Q9BSJ8 1104 aa17.79■□□□□ 0.44
LRP1-211ENST00000556356 MCM9Q9NXL9 1143 aa17.79■□□□□ 0.44
LRP1-211ENST00000556356 A0A0U1RQG5 324 aaPredicted RBP17.78■□□□□ 0.44
LRP1-211ENST00000556356 TMEM266Q2M3C6 531 aa17.78■□□□□ 0.44
LRP1-211ENST00000556356 SUCLG2Q96I99 432 aa17.78■□□□□ 0.44
LRP1-211ENST00000556356 RBM8AQ9Y5S9 174 aaKnown RBP17.78■□□□□ 0.44
LRP1-211ENST00000556356 CDC42BPGQ6DT37 1551 aa17.78■□□□□ 0.44
LRP1-211ENST00000556356 CCDC144CPQ8IYA2 1237 aa17.78■□□□□ 0.44
LRP1-211ENST00000556356 JAG2Q9Y219 1238 aa17.78■□□□□ 0.44
LRP1-211ENST00000556356 CROCC2H7BZ55 1655 aa17.78■□□□□ 0.44
LRP1-211ENST00000556356 CCDC192P0DO97 292 aa17.78■□□□□ 0.44
LRP1-211ENST00000556356 IFIT1BQ5T764 474 aaKnown RBP17.78■□□□□ 0.44
LRP1-211ENST00000556356 CCAR2Q8N163 923 aaKnown RBP17.78■□□□□ 0.44
LRP1-211ENST00000556356 MIGA1Q8NAN2 632 aa17.78■□□□□ 0.44
LRP1-211ENST00000556356 SMC2O95347 1197 aa17.78■□□□□ 0.44
LRP1-211ENST00000556356 EIF6P56537 245 aaKnown RBP17.78■□□□□ 0.44
LRP1-211ENST00000556356 NLGN1Q8N2Q7 840 aa17.78■□□□□ 0.44
LRP1-211ENST00000556356 BLMP54132 1417 aaPredicted RBP17.77■□□□□ 0.44
LRP1-211ENST00000556356 ODF2Q5BJF6 829 aa17.77■□□□□ 0.44
LRP1-211ENST00000556356 TRIM5Q9C035 493 aa17.77■□□□□ 0.44
LRP1-211ENST00000556356 CLTCQ00610 1675 aaKnown RBP17.77■□□□□ 0.44
LRP1-211ENST00000556356 MSL1Q68DK7 614 aa17.77■□□□□ 0.44
LRP1-211ENST00000556356 ASAP1Q9ULH1 1129 aa17.77■□□□□ 0.44
LRP1-211ENST00000556356 MAST3O60307 1309 aa17.77■□□□□ 0.44
LRP1-211ENST00000556356 GUCY1B3Q02153 619 aa17.77■□□□□ 0.43
LRP1-211ENST00000556356 TNNI3KQ59H18 835 aa17.77■□□□□ 0.43
LRP1-211ENST00000556356 FPGT-TNNI3KV9GXZ4 949 aa17.77■□□□□ 0.43
LRP1-211ENST00000556356 ZNF594Q96JF6 807 aaPredicted RBP17.77■□□□□ 0.43
LRP1-211ENST00000556356 MPHOSPH6Q99547 160 aaKnown RBP17.77■□□□□ 0.43
LRP1-211ENST00000556356 AGLP35573 1532 aa17.77■□□□□ 0.43
LRP1-211ENST00000556356 GLI2P10070 1586 aa17.76■□□□□ 0.43
LRP1-211ENST00000556356 GNAQP50148 359 aa17.76■□□□□ 0.43
LRP1-211ENST00000556356 CERKQ8TCT0 537 aa17.76■□□□□ 0.43
LRP1-211ENST00000556356 MROH5Q6ZUA9 1318 aa17.76■□□□□ 0.43
LRP1-211ENST00000556356 NEURL1BA8MQ27 555 aa17.76■□□□□ 0.43
LRP1-211ENST00000556356 ORC3Q9UBD5 711 aaPredicted RBP17.76■□□□□ 0.43
LRP1-211ENST00000556356 CCDC39Q9UFE4 941 aa17.76■□□□□ 0.43
LRP1-211ENST00000556356 CEP152O94986 1710 aa17.76■□□□□ 0.43
LRP1-211ENST00000556356 CRKLP46109 303 aaKnown RBP17.76■□□□□ 0.43
LRP1-211ENST00000556356 TIMM10P62072 90 aa17.76■□□□□ 0.43
LRP1-211ENST00000556356 BAG4O95429 457 aaKnown RBP17.76■□□□□ 0.43
LRP1-211ENST00000556356 TTC6Q86TZ1 520 aa17.76■□□□□ 0.43
LRP1-211ENST00000556356 KLF18A0A0U1RQI7 1052 aa17.75■□□□□ 0.43
LRP1-211ENST00000556356 BRPF1P55201 1214 aaPredicted RBP17.75■□□□□ 0.43
LRP1-211ENST00000556356 LPIN2Q92539 896 aa17.75■□□□□ 0.43
LRP1-211ENST00000556356 CAMSAP1Q5T5Y3 1602 aa17.75■□□□□ 0.43
LRP1-211ENST00000556356 SYCP1Q15431 976 aa17.75■□□□□ 0.43
LRP1-211ENST00000556356 WDR66Q8TBY9 1149 aa17.75■□□□□ 0.43
LRP1-211ENST00000556356 ZBTB43O43298 467 aa17.75■□□□□ 0.43
LRP1-211ENST00000556356 PPP4R3AQ6IN85 833 aa17.75■□□□□ 0.43
LRP1-211ENST00000556356 SMC5Q8IY18 1101 aa17.75■□□□□ 0.43
LRP1-211ENST00000556356 XAGE2Q96GT9 111 aa17.75■□□□□ 0.43
LRP1-211ENST00000556356 SCAND2PQ9GZW5 306 aaPredicted RBP17.75■□□□□ 0.43
LRP1-211ENST00000556356 BRF1Q92994 677 aa17.75■□□□□ 0.43
LRP1-211ENST00000556356 SMARCE1Q969G3 411 aa17.75■□□□□ 0.43
LRP1-211ENST00000556356 SLC26A6Q9BXS9 759 aa17.75■□□□□ 0.43
LRP1-211ENST00000556356 NBPF7P0C2Y1 421 aaPredicted RBP17.74■□□□□ 0.43
LRP1-211ENST00000556356 TNS3Q68CZ2 1445 aa17.74■□□□□ 0.43
LRP1-211ENST00000556356 AFF2P51816 1311 aa17.74■□□□□ 0.43
LRP1-211ENST00000556356 RPS8P62241 208 aaKnown RBP17.74■□□□□ 0.43
LRP1-211ENST00000556356 TTLL7Q6ZT98 887 aa17.74■□□□□ 0.43
LRP1-211ENST00000556356 MPNDQ8N594 471 aa17.74■□□□□ 0.43
LRP1-211ENST00000556356 MATR3P43243 847 aaKnown RBP eCLIP17.74■□□□□ 0.43
LRP1-211ENST00000556356 NUP62CLQ9H1M0 184 aa17.74■□□□□ 0.43
LRP1-211ENST00000556356 IL6STP40189 918 aaPredicted RBP17.74■□□□□ 0.43
LRP1-211ENST00000556356 KLHDC4Q8TBB5 520 aa17.74■□□□□ 0.43
LRP1-211ENST00000556356 LARP6Q9BRS8 491 aaKnown RBP17.74■□□□□ 0.43
LRP1-211ENST00000556356 MAP3K15Q6ZN16 1313 aa17.73■□□□□ 0.43
LRP1-211ENST00000556356 RAD50Q92878 1312 aa17.73■□□□□ 0.43
LRP1-211ENST00000556356 CHMP4BP1P59074 171 aa17.73■□□□□ 0.43
LRP1-211ENST00000556356 USPL1Q5W0Q7 1092 aa17.73■□□□□ 0.43
LRP1-211ENST00000556356 RAB11FIP4Q86YS3 637 aa17.73■□□□□ 0.43
LRP1-211ENST00000556356 TEX11Q8IYF3 940 aa17.73■□□□□ 0.43
LRP1-211ENST00000556356 ZNF592Q92610 1267 aa17.73■□□□□ 0.43
LRP1-211ENST00000556356 TANGO6Q9C0B7 1094 aa17.73■□□□□ 0.43
LRP1-211ENST00000556356 ARHGEF40Q8TER5 1519 aa17.73■□□□□ 0.43
LRP1-211ENST00000556356 FAM182BQ5T319 152 aa17.73■□□□□ 0.43
LRP1-211ENST00000556356 SCLT1Q96NL6 688 aa17.73■□□□□ 0.43
LRP1-211ENST00000556356 KDRP35968 1356 aa17.73■□□□□ 0.43
LRP1-211ENST00000556356 TAF5LO75529 589 aa17.73■□□□□ 0.43
LRP1-211ENST00000556356 NASPP49321 788 aaPredicted RBP17.73■□□□□ 0.43
LRP1-211ENST00000556356 CTSWP56202 376 aa17.73■□□□□ 0.43
LRP1-211ENST00000556356 PLEKHF1Q96S99 279 aa17.73■□□□□ 0.43
LRP1-211ENST00000556356 CDK12Q9NYV4 1490 aaPredicted RBP17.72■□□□□ 0.43
LRP1-211ENST00000556356 NIM1KQ8IY84 436 aa17.72■□□□□ 0.43
LRP1-211ENST00000556356 DBNDD2Q9BQY9 259 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms