RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 CRAMP1Q96RY5 1269 aa8.21□□□□□ -1.1
TMEM260-209ENST00000556079 METTL22Q9BUU2 404 aaPredicted RBP8.21□□□□□ -1.1
TMEM260-209ENST00000556079 TAF1DQ9H5J8 278 aaPredicted RBP8.21□□□□□ -1.1
TMEM260-209ENST00000556079 PDZRN3Q9UPQ7 1066 aa8.21□□□□□ -1.1
TMEM260-209ENST00000556079 PASKQ96RG2 1323 aa8.21□□□□□ -1.1
TMEM260-209ENST00000556079 CNTNAP1P78357 1384 aa8.21□□□□□ -1.1
TMEM260-209ENST00000556079 SCN9AQ15858 1988 aa8.21□□□□□ -1.1
TMEM260-209ENST00000556079 SHTN1A0MZ66 631 aa8.2□□□□□ -1.1
TMEM260-209ENST00000556079 CHRM1P11229 460 aaPredicted RBP8.2□□□□□ -1.1
TMEM260-209ENST00000556079 ALDH1B1P30837 517 aa8.2□□□□□ -1.1
TMEM260-209ENST00000556079 VEGFBP49765 207 aa8.2□□□□□ -1.1
TMEM260-209ENST00000556079 FLIIQ13045 1269 aa8.2□□□□□ -1.1
TMEM260-209ENST00000556079 EAPPQ56P03 285 aaPredicted RBP8.2□□□□□ -1.1
TMEM260-209ENST00000556079 KSR2Q6VAB6 950 aa8.2□□□□□ -1.1
TMEM260-209ENST00000556079 LDHDQ86WU2 507 aa8.2□□□□□ -1.1
TMEM260-209ENST00000556079 WDR63Q8IWG1 891 aa8.2□□□□□ -1.1
TMEM260-209ENST00000556079 BCL2L13Q9BXK5 485 aa8.2□□□□□ -1.1
TMEM260-209ENST00000556079 COLQQ9Y215 455 aaPredicted RBP8.2□□□□□ -1.1
TMEM260-209ENST00000556079 CACNA1FO60840 1977 aa8.2□□□□□ -1.1
TMEM260-209ENST00000556079 IQCA1LA6NCM1 817 aa8.19□□□□□ -1.1
TMEM260-209ENST00000556079 NEURL1BA8MQ27 555 aa8.19□□□□□ -1.1
TMEM260-209ENST00000556079 ITGBL1O95965 494 aaPredicted RBP8.19□□□□□ -1.1
TMEM260-209ENST00000556079 GPSM2P81274 684 aa8.19□□□□□ -1.1
TMEM260-209ENST00000556079 FMR1Q06787 632 aaKnown RBP eCLIP8.19□□□□□ -1.1
TMEM260-209ENST00000556079 GRAPQ13588 217 aa8.19□□□□□ -1.1
TMEM260-209ENST00000556079 UBE3BQ7Z3V4 1068 aa8.19□□□□□ -1.1
TMEM260-209ENST00000556079 GRAPLQ8TC17 118 aaPredicted RBP8.19□□□□□ -1.1
TMEM260-209ENST00000556079 L3MBTL3Q96JM7 780 aaPredicted RBP8.19□□□□□ -1.1
TMEM260-209ENST00000556079 STK31Q9BXU1 1019 aa8.19□□□□□ -1.1
TMEM260-209ENST00000556079 CWC25Q9NXE8 425 aaPredicted RBP8.19□□□□□ -1.1
TMEM260-209ENST00000556079 ATP6V0A2Q9Y487 856 aa8.19□□□□□ -1.1
TMEM260-209ENST00000556079 GJA3Q9Y6H8 435 aa8.19□□□□□ -1.1
TMEM260-209ENST00000556079 RNF123Q5XPI4 1314 aa8.19□□□□□ -1.1
TMEM260-209ENST00000556079 A0A1B0GUL6 1792 aa8.19□□□□□ -1.1
TMEM260-209ENST00000556079 ADAMTSL1Q8N6G6 1762 aa8.18□□□□□ -1.1
TMEM260-209ENST00000556079 TMEM88BA6NKF7 163 aa8.18□□□□□ -1.1
TMEM260-209ENST00000556079 RIMBP2O15034 1052 aa8.18□□□□□ -1.1
TMEM260-209ENST00000556079 PPIP5K2O43314 1243 aa8.18□□□□□ -1.1
TMEM260-209ENST00000556079 PCCAP05165 728 aaPredicted RBP8.18□□□□□ -1.1
TMEM260-209ENST00000556079 LBX1P52954 281 aa8.18□□□□□ -1.1
TMEM260-209ENST00000556079 TRIM28Q13263 835 aaKnown RBP8.18□□□□□ -1.1
TMEM260-209ENST00000556079 FKBP5Q13451 457 aaPredicted RBP8.18□□□□□ -1.1
TMEM260-209ENST00000556079 SF3B3Q15393 1217 aaKnown RBP8.18□□□□□ -1.1
TMEM260-209ENST00000556079 SOGA3Q5TF21 947 aa8.18□□□□□ -1.1
TMEM260-209ENST00000556079 MAP1SQ66K74 1059 aaPredicted RBP8.18□□□□□ -1.1
TMEM260-209ENST00000556079 DDX46Q7L014 1031 aaKnown RBP8.18□□□□□ -1.1
TMEM260-209ENST00000556079 RTKN2Q8IZC4 609 aa8.18□□□□□ -1.1
TMEM260-209ENST00000556079 LARGE2Q8N3Y3 721 aa8.18□□□□□ -1.1
TMEM260-209ENST00000556079 ZBTB38Q8NAP3 1195 aaPredicted RBP8.18□□□□□ -1.1
TMEM260-209ENST00000556079 PSMD1Q99460 953 aa8.18□□□□□ -1.1
TMEM260-209ENST00000556079 GREM2Q9H772 168 aa8.18□□□□□ -1.1
TMEM260-209ENST00000556079 KCNQ5Q9NR82 932 aa8.18□□□□□ -1.1
TMEM260-209ENST00000556079 SCN4AP35499 1836 aa8.17□□□□□ -1.1
TMEM260-209ENST00000556079 YDJCA8MPS7 323 aa8.17□□□□□ -1.1
TMEM260-209ENST00000556079 FZD9O00144 591 aa8.17□□□□□ -1.1
TMEM260-209ENST00000556079 EPHX2P34913 555 aa8.17□□□□□ -1.1
TMEM260-209ENST00000556079 CTCFP49711 727 aaPredicted RBP8.17□□□□□ -1.1
TMEM260-209ENST00000556079 CASP7P55210 303 aa8.17□□□□□ -1.1
TMEM260-209ENST00000556079 DOK7Q18PE1 504 aa8.17□□□□□ -1.1
TMEM260-209ENST00000556079 EPHA10Q5JZY3 1008 aa8.17□□□□□ -1.1
TMEM260-209ENST00000556079 DPP8Q6V1X1 898 aaPredicted RBP8.17□□□□□ -1.1
TMEM260-209ENST00000556079 CCDC191Q8NCU4 936 aa8.17□□□□□ -1.1
TMEM260-209ENST00000556079 DNAAF4Q8WXU2 420 aa8.17□□□□□ -1.1
TMEM260-209ENST00000556079 AIDAQ96BJ3 306 aa8.17□□□□□ -1.1
TMEM260-209ENST00000556079 PRDM10Q9NQV6 1147 aa8.17□□□□□ -1.1
TMEM260-209ENST00000556079 WBP1LQ9NX94 342 aa8.17□□□□□ -1.1
TMEM260-209ENST00000556079 POLLQ9UGP5 575 aa8.17□□□□□ -1.1
TMEM260-209ENST00000556079 HACL1Q9UJ83 578 aa8.17□□□□□ -1.1
TMEM260-209ENST00000556079 ZNF646O15015 1829 aaPredicted RBP8.17□□□□□ -1.1
TMEM260-209ENST00000556079 SNAP23O00161 211 aa8.16□□□□□ -1.1
TMEM260-209ENST00000556079 RAD17O75943 681 aa8.16□□□□□ -1.1
TMEM260-209ENST00000556079 DDX58O95786 925 aaKnown RBP8.16□□□□□ -1.1
TMEM260-209ENST00000556079 KLRK1P26718 216 aa8.16□□□□□ -1.1
TMEM260-209ENST00000556079 EPS15P42566 896 aa8.16□□□□□ -1.1
TMEM260-209ENST00000556079 PSEN1P49768 467 aa8.16□□□□□ -1.1
TMEM260-209ENST00000556079 SCNN1DP51172 638 aa8.16□□□□□ -1.1
TMEM260-209ENST00000556079 CTSWP56202 376 aa8.16□□□□□ -1.1
TMEM260-209ENST00000556079 SLFN5Q08AF3 891 aa8.16□□□□□ -1.1
TMEM260-209ENST00000556079 GCKRQ14397 625 aa8.16□□□□□ -1.1
TMEM260-209ENST00000556079 FAM161AQ3B820 660 aa8.16□□□□□ -1.1
TMEM260-209ENST00000556079 IER5LQ5T953 404 aa8.16□□□□□ -1.1
TMEM260-209ENST00000556079 DLK2Q6UY11 383 aa8.16□□□□□ -1.1
TMEM260-209ENST00000556079 SP8Q8IXZ3 490 aa8.16□□□□□ -1.1
TMEM260-209ENST00000556079 CNTROBQ8N137 903 aa8.16□□□□□ -1.1
TMEM260-209ENST00000556079 MPNDQ8N594 471 aa8.16□□□□□ -1.1
TMEM260-209ENST00000556079 MRPL50Q8N5N7 158 aaKnown RBP8.16□□□□□ -1.1
TMEM260-209ENST00000556079 MYH16Q9H6N6 1097 aa8.16□□□□□ -1.1
TMEM260-209ENST00000556079 DBNDD1Q9H9R9 158 aa8.16□□□□□ -1.1
TMEM260-209ENST00000556079 TNNQ9UQP3 1299 aa8.16□□□□□ -1.1
TMEM260-209ENST00000556079 H7C1W4 665 aa8.15□□□□□ -1.1
TMEM260-209ENST00000556079 PDE8AO60658 829 aa8.15□□□□□ -1.1
TMEM260-209ENST00000556079 BBOX1O75936 387 aa8.15□□□□□ -1.1
TMEM260-209ENST00000556079 HSPA8P11142 646 aaKnown RBP8.15□□□□□ -1.1
TMEM260-209ENST00000556079 PLCG2P16885 1265 aa8.15□□□□□ -1.1
TMEM260-209ENST00000556079 GMPSP49915 693 aaPredicted RBP8.15□□□□□ -1.1
TMEM260-209ENST00000556079 CXCL9Q07325 125 aa8.15□□□□□ -1.1
TMEM260-209ENST00000556079 DEFB115Q30KQ5 88 aa8.15□□□□□ -1.1
TMEM260-209ENST00000556079 BEND3Q5T5X7 828 aa8.15□□□□□ -1.1
TMEM260-209ENST00000556079 DIEXFQ68CQ4 756 aaKnown RBP8.15□□□□□ -1.1
TMEM260-209ENST00000556079 SLC4A10Q6U841 1118 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms