RNA–Protein interactions for RNA: ENST00000556019.2

LINC01588-209, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 3 BASIC

Gene LINC01588, Length 534 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-209ENST00000556019 C6orf229H3BNL8 230 aa13.72□□□□□ -0.21
LINC01588-209ENST00000556019 VIL1P09327 827 aaKnown RBP13.72□□□□□ -0.21
LINC01588-209ENST00000556019 ZNF157P51786 506 aaPredicted RBP13.72□□□□□ -0.21
LINC01588-209ENST00000556019 KIF4BQ2VIQ3 1234 aa13.72□□□□□ -0.21
LINC01588-209ENST00000556019 RTL5Q5HYW3 569 aaPredicted RBP13.72□□□□□ -0.21
LINC01588-209ENST00000556019 C2orf69Q8N8R5 385 aa13.72□□□□□ -0.21
LINC01588-209ENST00000556019 CCDC102AQ96A19 550 aa13.72□□□□□ -0.21
LINC01588-209ENST00000556019 GGA3Q9NZ52 723 aa13.72□□□□□ -0.21
LINC01588-209ENST00000556019 TRIM35Q9UPQ4 493 aa13.72□□□□□ -0.21
LINC01588-209ENST00000556019 AKAP11Q9UKA4 1901 aa13.72□□□□□ -0.21
LINC01588-209ENST00000556019 ZNF609O15014 1411 aa13.72□□□□□ -0.21
LINC01588-209ENST00000556019 ANKRD13DQ6ZTN6 518 aa13.71□□□□□ -0.21
LINC01588-209ENST00000556019 DCPSQ96C86 337 aaKnown RBP13.71□□□□□ -0.21
LINC01588-209ENST00000556019 CDCA5Q96FF9 252 aa13.71□□□□□ -0.21
LINC01588-209ENST00000556019 PCDH10Q9P2E7 1040 aa13.71□□□□□ -0.21
LINC01588-209ENST00000556019 ZNF646O15015 1829 aaPredicted RBP13.71□□□□□ -0.22
LINC01588-209ENST00000556019 ZNF280AP59817 542 aaPredicted RBP13.7□□□□□ -0.22
LINC01588-209ENST00000556019 RPS8P62241 208 aaKnown RBP13.7□□□□□ -0.22
LINC01588-209ENST00000556019 RASAL3Q86YV0 1011 aa13.7□□□□□ -0.22
LINC01588-209ENST00000556019 GMLQ99445 158 aa13.7□□□□□ -0.22
LINC01588-209ENST00000556019 SEC31BQ9NQW1 1179 aa13.7□□□□□ -0.22
LINC01588-209ENST00000556019 PODXL2Q9NZ53 605 aa13.7□□□□□ -0.22
LINC01588-209ENST00000556019 IRS4O14654 1257 aaPredicted RBP13.69□□□□□ -0.22
LINC01588-209ENST00000556019 TRIM28Q13263 835 aaKnown RBP13.69□□□□□ -0.22
LINC01588-209ENST00000556019 HDGFL1Q5TGJ6 251 aa13.69□□□□□ -0.22
LINC01588-209ENST00000556019 CCDC146Q8IYE0 955 aa13.69□□□□□ -0.22
LINC01588-209ENST00000556019 EYA3Q99504 573 aa13.69□□□□□ -0.22
LINC01588-209ENST00000556019 PAPPA2Q9BXP8 1791 aa13.68□□□□□ -0.22
LINC01588-209ENST00000556019 PDE4DIPQ5VU43 2346 aa13.68□□□□□ -0.22
LINC01588-209ENST00000556019 WTIPA6NIX2 430 aaPredicted RBP13.68□□□□□ -0.22
LINC01588-209ENST00000556019 LMOD3Q0VAK6 560 aa13.68□□□□□ -0.22
LINC01588-209ENST00000556019 SCARF1Q14162 830 aa13.68□□□□□ -0.22
LINC01588-209ENST00000556019 NEUROD2Q15784 382 aa13.68□□□□□ -0.22
LINC01588-209ENST00000556019 ANGEL2Q5VTE6 544 aaKnown RBP13.68□□□□□ -0.22
LINC01588-209ENST00000556019 MOB2Q70IA6 237 aa13.68□□□□□ -0.22
LINC01588-209ENST00000556019 SULF1Q8IWU6 871 aa13.68□□□□□ -0.22
LINC01588-209ENST00000556019 SCAF8Q9UPN6 1271 aaKnown RBP13.68□□□□□ -0.22
LINC01588-209ENST00000556019 HOXB7P09629 217 aa13.67□□□□□ -0.22
LINC01588-209ENST00000556019 RSBN1LQ6PCB5 846 aaPredicted RBP13.67□□□□□ -0.22
LINC01588-209ENST00000556019 CTU1Q7Z7A3 348 aaKnown RBP13.67□□□□□ -0.22
LINC01588-209ENST00000556019 ZC3H12CQ9C0D7 883 aaKnown RBP13.67□□□□□ -0.22
LINC01588-209ENST00000556019 DBF4Q9UBU7 674 aaPredicted RBP13.67□□□□□ -0.22
LINC01588-209ENST00000556019 LAS1LQ9Y4W2 734 aaKnown RBP13.67□□□□□ -0.22
LINC01588-209ENST00000556019 UFL1O94874 794 aa13.66□□□□□ -0.22
LINC01588-209ENST00000556019 ZBTB38Q8NAP3 1195 aaPredicted RBP13.66□□□□□ -0.22
LINC01588-209ENST00000556019 HPS5Q9UPZ3 1129 aa13.66□□□□□ -0.22
LINC01588-209ENST00000556019 DUSP27Q5VZP5 1158 aa13.65□□□□□ -0.22
LINC01588-209ENST00000556019 AGBL3Q8NEM8 1001 aa13.65□□□□□ -0.22
LINC01588-209ENST00000556019 JARID2Q92833 1246 aaPredicted RBP13.65□□□□□ -0.22
LINC01588-209ENST00000556019 PHAXQ9H814 394 aaKnown RBP13.65□□□□□ -0.22
LINC01588-209ENST00000556019 HYPKQ9NX55 129 aa13.65□□□□□ -0.22
LINC01588-209ENST00000556019 PRAMEF18Q5VWM3 479 aa13.64□□□□□ -0.23
LINC01588-209ENST00000556019 MYOZ2Q9NPC6 264 aa13.64□□□□□ -0.23
LINC01588-209ENST00000556019 GGA1Q9UJY5 639 aa13.64□□□□□ -0.23
LINC01588-209ENST00000556019 PITPNM2Q9BZ72 1349 aa13.64□□□□□ -0.23
LINC01588-209ENST00000556019 UBE2Q2LH0YL09 131 aa13.63□□□□□ -0.23
LINC01588-209ENST00000556019 TBC1D8O95759 1140 aa13.63□□□□□ -0.23
LINC01588-209ENST00000556019 USP17L8P0C7I0 530 aa13.63□□□□□ -0.23
LINC01588-209ENST00000556019 ZNF853P0CG23 659 aa13.63□□□□□ -0.23
LINC01588-209ENST00000556019 FKBP1BP68106 108 aa13.63□□□□□ -0.23
LINC01588-209ENST00000556019 NBPF9Q3BBW0 867 aa13.63□□□□□ -0.23
LINC01588-209ENST00000556019 PRPF38BQ5VTL8 546 aaKnown RBP13.63□□□□□ -0.23
LINC01588-209ENST00000556019 REM2Q8IYK8 340 aaPredicted RBP13.63□□□□□ -0.23
LINC01588-209ENST00000556019 ZNF296Q8WUU4 475 aaPredicted RBP13.63□□□□□ -0.23
LINC01588-209ENST00000556019 CCDC85AQ96PX6 553 aaPredicted RBP13.63□□□□□ -0.23
LINC01588-209ENST00000556019 MXD3Q9BW11 206 aa13.63□□□□□ -0.23
LINC01588-209ENST00000556019 MBIPQ9NS73 344 aa13.63□□□□□ -0.23
LINC01588-209ENST00000556019 ANKIB1Q9P2G1 1089 aa13.63□□□□□ -0.23
LINC01588-209ENST00000556019 RALBP1Q15311 655 aa13.62□□□□□ -0.23
LINC01588-209ENST00000556019 RUNDC1Q96C34 613 aa13.62□□□□□ -0.23
LINC01588-209ENST00000556019 MYD88Q99836 296 aa13.62□□□□□ -0.23
LINC01588-209ENST00000556019 R3HDMLQ9H3Y0 253 aa13.62□□□□□ -0.23
LINC01588-209ENST00000556019 SPEF2Q9C093 1822 aa13.62□□□□□ -0.23
LINC01588-209ENST00000556019 HTTP42858 3142 aa13.61□□□□□ -0.23
LINC01588-209ENST00000556019 USP17L3A6NCW0 530 aa13.61□□□□□ -0.23
LINC01588-209ENST00000556019 USP17L4A6NCW7 530 aa13.61□□□□□ -0.23
LINC01588-209ENST00000556019 PDE8AO60658 829 aa13.61□□□□□ -0.23
LINC01588-209ENST00000556019 PCCAP05165 728 aaPredicted RBP13.61□□□□□ -0.23
LINC01588-209ENST00000556019 TM4SF4P48230 202 aa13.61□□□□□ -0.23
LINC01588-209ENST00000556019 DACT2Q5SW24 774 aa13.61□□□□□ -0.23
LINC01588-209ENST00000556019 USP17L1Q7RTZ2 530 aa13.61□□□□□ -0.23
LINC01588-209ENST00000556019 RIC3Q7Z5B4 369 aa13.61□□□□□ -0.23
LINC01588-209ENST00000556019 XDHP47989 1333 aa13.61□□□□□ -0.23
LINC01588-209ENST00000556019 CCDC152Q4G0S7 254 aa13.6□□□□□ -0.23
LINC01588-209ENST00000556019 PODNQ7Z5L7 613 aa13.6□□□□□ -0.23
LINC01588-209ENST00000556019 CCDC191Q8NCU4 936 aa13.6□□□□□ -0.23
LINC01588-209ENST00000556019 ADAMTS8Q9UP79 889 aa13.6□□□□□ -0.23
LINC01588-209ENST00000556019 G3V3G9 751 aa13.59□□□□□ -0.23
LINC01588-209ENST00000556019 WNT10BO00744 389 aa13.59□□□□□ -0.23
LINC01588-209ENST00000556019 ATP2B4P23634 1241 aa13.59□□□□□ -0.23
LINC01588-209ENST00000556019 DCAF8Q5TAQ9 597 aa13.59□□□□□ -0.23
LINC01588-209ENST00000556019 TXNRD3Q86VQ6 643 aa13.59□□□□□ -0.23
LINC01588-209ENST00000556019 MINPP1Q9UNW1 487 aa13.59□□□□□ -0.23
LINC01588-209ENST00000556019 MKI67P46013 3256 aaKnown RBP13.59□□□□□ -0.23
LINC01588-209ENST00000556019 MED23Q9ULK4 1368 aa13.58□□□□□ -0.23
LINC01588-209ENST00000556019 GPR25O00155 361 aa13.58□□□□□ -0.24
LINC01588-209ENST00000556019 ELL2O00472 640 aaPredicted RBP13.58□□□□□ -0.24
LINC01588-209ENST00000556019 GOLGA2Q08379 1002 aa13.58□□□□□ -0.24
LINC01588-209ENST00000556019 MKRN3Q13064 507 aaKnown RBP13.58□□□□□ -0.24
LINC01588-209ENST00000556019 PKN2Q16513 984 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms