RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 ARHGAP45Q92619 1136 aa4.97□□□□□ -1.61
LINC00648-202ENST00000555985 NLRP3Q96P20 1036 aa4.97□□□□□ -1.61
LINC00648-202ENST00000555985 PRR29P0C7W0 189 aa4.97□□□□□ -1.61
LINC00648-202ENST00000555985 CTSWP56202 376 aa4.97□□□□□ -1.61
LINC00648-202ENST00000555985 RABL6Q3YEC7 729 aaPredicted RBP4.97□□□□□ -1.61
LINC00648-202ENST00000555985 CCDC93Q567U6 631 aa4.97□□□□□ -1.61
LINC00648-202ENST00000555985 ARHGAP27Q6ZUM4 889 aa4.97□□□□□ -1.61
LINC00648-202ENST00000555985 CELF1Q92879 486 aaKnown RBP4.97□□□□□ -1.61
LINC00648-202ENST00000555985 ZNF622Q969S3 477 aaKnown RBP eCLIP4.97□□□□□ -1.61
LINC00648-202ENST00000555985 L3MBTL3Q96JM7 780 aaPredicted RBP4.97□□□□□ -1.61
LINC00648-202ENST00000555985 FAM177BA6PVY3 158 aa4.96□□□□□ -1.62
LINC00648-202ENST00000555985 F6X3S4 739 aa4.96□□□□□ -1.62
LINC00648-202ENST00000555985 IFFO2Q5TF58 517 aa4.96□□□□□ -1.62
LINC00648-202ENST00000555985 PPP4R2Q9NY27 417 aa4.96□□□□□ -1.62
LINC00648-202ENST00000555985 LAMB1P07942 1786 aa4.96□□□□□ -1.62
LINC00648-202ENST00000555985 EPHA10Q5JZY3 1008 aa4.96□□□□□ -1.62
LINC00648-202ENST00000555985 TAOK3Q9H2K8 898 aa4.96□□□□□ -1.62
LINC00648-202ENST00000555985 WWC3Q9ULE0 1092 aa4.96□□□□□ -1.62
LINC00648-202ENST00000555985 CLEC11AQ9Y240 323 aa4.96□□□□□ -1.62
LINC00648-202ENST00000555985 THSD7BQ9C0I4 1608 aa4.95□□□□□ -1.62
LINC00648-202ENST00000555985 ECM29Q5VYK3 1845 aa4.95□□□□□ -1.62
LINC00648-202ENST00000555985 GLTPD2A6NH11 291 aa4.95□□□□□ -1.62
LINC00648-202ENST00000555985 FKBP5Q13451 457 aaPredicted RBP4.95□□□□□ -1.62
LINC00648-202ENST00000555985 INTS3Q68E01 1043 aaKnown RBP4.95□□□□□ -1.62
LINC00648-202ENST00000555985 ANKRD44Q8N8A2 993 aa4.95□□□□□ -1.62
LINC00648-202ENST00000555985 RPGRQ92834 1020 aaKnown RBP4.95□□□□□ -1.62
LINC00648-202ENST00000555985 USP44Q9H0E7 712 aa4.95□□□□□ -1.62
LINC00648-202ENST00000555985 SEC31BQ9NQW1 1179 aa4.95□□□□□ -1.62
LINC00648-202ENST00000555985 ZNF541Q9H0D2 1346 aa4.95□□□□□ -1.62
LINC00648-202ENST00000555985 GRM8O00222 908 aa4.95□□□□□ -1.62
LINC00648-202ENST00000555985 IARSP41252 1262 aaKnown RBP4.95□□□□□ -1.62
LINC00648-202ENST00000555985 IPO9Q96P70 1041 aaKnown RBP4.95□□□□□ -1.62
LINC00648-202ENST00000555985 GREM2Q9H772 168 aa4.95□□□□□ -1.62
LINC00648-202ENST00000555985 CREBZFQ9NS37 354 aa4.95□□□□□ -1.62
LINC00648-202ENST00000555985 BSDC1Q9NW68 430 aaPredicted RBP4.95□□□□□ -1.62
LINC00648-202ENST00000555985 RNF181Q9P0P0 153 aa4.95□□□□□ -1.62
LINC00648-202ENST00000555985 POLLQ9UGP5 575 aa4.95□□□□□ -1.62
LINC00648-202ENST00000555985 NBPF7P0C2Y1 421 aaPredicted RBP4.94□□□□□ -1.62
LINC00648-202ENST00000555985 HSP90B1P14625 803 aaKnown RBP4.94□□□□□ -1.62
LINC00648-202ENST00000555985 RFX5P48382 616 aaPredicted RBP4.94□□□□□ -1.62
LINC00648-202ENST00000555985 IRX6P78412 446 aaPredicted RBP4.94□□□□□ -1.62
LINC00648-202ENST00000555985 GPSM2P81274 684 aa4.94□□□□□ -1.62
LINC00648-202ENST00000555985 KIAA2012Q0VF49 1180 aa4.94□□□□□ -1.62
LINC00648-202ENST00000555985 C15orf52Q6ZUT6 534 aaKnown RBP4.94□□□□□ -1.62
LINC00648-202ENST00000555985 UBE3BQ7Z3V4 1068 aa4.94□□□□□ -1.62
LINC00648-202ENST00000555985 PAPPA2Q9BXP8 1791 aa4.94□□□□□ -1.62
LINC00648-202ENST00000555985 YDJCA8MPS7 323 aa4.94□□□□□ -1.62
LINC00648-202ENST00000555985 VASPP50552 380 aaPredicted RBP4.94□□□□□ -1.62
LINC00648-202ENST00000555985 RPS8P62241 208 aaKnown RBP4.94□□□□□ -1.62
LINC00648-202ENST00000555985 NEXNQ0ZGT2 675 aa4.94□□□□□ -1.62
LINC00648-202ENST00000555985 CCDC152Q4G0S7 254 aa4.94□□□□□ -1.62
LINC00648-202ENST00000555985 DDX46Q7L014 1031 aaKnown RBP4.94□□□□□ -1.62
LINC00648-202ENST00000555985 JARID2Q92833 1246 aaPredicted RBP4.94□□□□□ -1.62
LINC00648-202ENST00000555985 SUCLG2Q96I99 432 aa4.94□□□□□ -1.62
LINC00648-202ENST00000555985 ZNF277Q9NRM2 450 aaPredicted RBP4.94□□□□□ -1.62
LINC00648-202ENST00000555985 NOB1Q9ULX3 412 aaKnown RBP4.94□□□□□ -1.62
LINC00648-202ENST00000555985 MED23Q9ULK4 1368 aa4.94□□□□□ -1.62
LINC00648-202ENST00000555985 VGLL2Q8N8G2 317 aa4.94□□□□□ -1.62
LINC00648-202ENST00000555985 TBC1D16Q8TBP0 767 aa4.94□□□□□ -1.62
LINC00648-202ENST00000555985 SRCIN1Q9C0H9 1055 aa4.94□□□□□ -1.62
LINC00648-202ENST00000555985 ZBTB47Q9UFB7 747 aaPredicted RBP4.94□□□□□ -1.62
LINC00648-202ENST00000555985 KIF16BQ96L93 1317 aa4.93□□□□□ -1.62
LINC00648-202ENST00000555985 BCAR3O75815 825 aa4.93□□□□□ -1.62
LINC00648-202ENST00000555985 TRIM27P14373 513 aa4.93□□□□□ -1.62
LINC00648-202ENST00000555985 GTF2E1P29083 439 aaPredicted RBP4.93□□□□□ -1.62
LINC00648-202ENST00000555985 HNRNPUQ00839 825 aaKnown RBP eCLIP4.93□□□□□ -1.62
LINC00648-202ENST00000555985 MTX1Q13505 466 aa4.93□□□□□ -1.62
LINC00648-202ENST00000555985 MINPP1Q9UNW1 487 aa4.93□□□□□ -1.62
LINC00648-202ENST00000555985 TNNQ9UQP3 1299 aa4.93□□□□□ -1.62
LINC00648-202ENST00000555985 WTIPA6NIX2 430 aaPredicted RBP4.93□□□□□ -1.62
LINC00648-202ENST00000555985 ANP32AP39687 249 aaKnown RBP4.93□□□□□ -1.62
LINC00648-202ENST00000555985 FAM161AQ3B820 660 aa4.93□□□□□ -1.62
LINC00648-202ENST00000555985 GPC2Q8N158 579 aa4.93□□□□□ -1.62
LINC00648-202ENST00000555985 MPNDQ8N594 471 aa4.93□□□□□ -1.62
LINC00648-202ENST00000555985 NMRK2Q9NPI5 230 aa4.93□□□□□ -1.62
LINC00648-202ENST00000555985 SMC4Q9NTJ3 1288 aa4.93□□□□□ -1.62
LINC00648-202ENST00000555985 RIPOR2Q9Y4F9 1068 aa4.93□□□□□ -1.62
LINC00648-202ENST00000555985 TRPM7Q96QT4 1865 aa4.92□□□□□ -1.62
LINC00648-202ENST00000555985 ITGA6P23229 1130 aa4.92□□□□□ -1.62
LINC00648-202ENST00000555985 CCT4P50991 539 aaKnown RBP4.92□□□□□ -1.62
LINC00648-202ENST00000555985 SCNN1DP51172 638 aa4.92□□□□□ -1.62
LINC00648-202ENST00000555985 ATF7IPQ6VMQ6 1270 aa4.92□□□□□ -1.62
LINC00648-202ENST00000555985 SUPT20HQ8NEM7 779 aa4.92□□□□□ -1.62
LINC00648-202ENST00000555985 RBM46Q8TBY0 533 aaKnown RBP4.92□□□□□ -1.62
LINC00648-202ENST00000555985 GMLQ99445 158 aa4.92□□□□□ -1.62
LINC00648-202ENST00000555985 BCL2L13Q9BXK5 485 aa4.92□□□□□ -1.62
LINC00648-202ENST00000555985 PGAP2Q9UHJ9 254 aa4.92□□□□□ -1.62
LINC00648-202ENST00000555985 XDHP47989 1333 aa4.92□□□□□ -1.62
LINC00648-202ENST00000555985 KDM2BQ8NHM5 1336 aa4.92□□□□□ -1.62
LINC00648-202ENST00000555985 MYH13Q9UKX3 1938 aa4.92□□□□□ -1.62
LINC00648-202ENST00000555985 NPHP1O15259 732 aa4.92□□□□□ -1.62
LINC00648-202ENST00000555985 MNX1P50219 401 aaPredicted RBP4.92□□□□□ -1.62
LINC00648-202ENST00000555985 C1QTNF8P60827 252 aa4.92□□□□□ -1.62
LINC00648-202ENST00000555985 AOC3Q16853 763 aa4.92□□□□□ -1.62
LINC00648-202ENST00000555985 API5Q9BZZ5 524 aaKnown RBP4.92□□□□□ -1.62
LINC00648-202ENST00000555985 BICC1Q9H694 974 aaKnown RBP4.92□□□□□ -1.62
LINC00648-202ENST00000555985 PASKQ96RG2 1323 aa4.92□□□□□ -1.62
LINC00648-202ENST00000555985 RLBP1P12271 317 aa4.91□□□□□ -1.62
LINC00648-202ENST00000555985 DPP8Q6V1X1 898 aaPredicted RBP4.91□□□□□ -1.62
LINC00648-202ENST00000555985 ANKRD18AQ8IVF6 992 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms