RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 GDF6Q6KF10 455 aaPredicted RBP8.71□□□□□ -1.02
SCFD1-217ENST00000555953 IGF2-ASQ6U949 168 aa8.71□□□□□ -1.02
SCFD1-217ENST00000555953 PBXIP1Q96AQ6 731 aa8.71□□□□□ -1.02
SCFD1-217ENST00000555953 DLL1O00548 723 aa8.7□□□□□ -1.02
SCFD1-217ENST00000555953 ZBTB39O15060 712 aa8.7□□□□□ -1.02
SCFD1-217ENST00000555953 ZAP70P43403 619 aa8.7□□□□□ -1.02
SCFD1-217ENST00000555953 PIK3R5Q8WYR1 880 aa8.7□□□□□ -1.02
SCFD1-217ENST00000555953 COL13A1Q5TAT6 717 aaPredicted RBP8.69□□□□□ -1.02
SCFD1-217ENST00000555953 IL22RA1Q8N6P7 574 aa8.69□□□□□ -1.02
SCFD1-217ENST00000555953 OR13H1Q8NG92 308 aa8.69□□□□□ -1.02
SCFD1-217ENST00000555953 GPR152Q8TDT2 470 aa8.69□□□□□ -1.02
SCFD1-217ENST00000555953 CCDC97Q96F63 343 aaPredicted RBP8.69□□□□□ -1.02
SCFD1-217ENST00000555953 STIM2Q9P246 746 aa8.69□□□□□ -1.02
SCFD1-217ENST00000555953 TRIM33Q9UPN9 1127 aa8.69□□□□□ -1.02
SCFD1-217ENST00000555953 SCO2A0A1W2PP80 73 aa8.68□□□□□ -1.02
SCFD1-217ENST00000555953 MEGF10Q96KG7 1140 aa8.68□□□□□ -1.02
SCFD1-217ENST00000555953 RBSNQ9H1K0 784 aa8.68□□□□□ -1.02
SCFD1-217ENST00000555953 FAM13BQ9NYF5 915 aa8.68□□□□□ -1.02
SCFD1-217ENST00000555953 SEPT3Q9UH03 358 aa8.67□□□□□ -1.02
SCFD1-217ENST00000555953 ATP2B4P23634 1241 aa8.66□□□□□ -1.02
SCFD1-217ENST00000555953 SETDB1Q15047 1291 aa8.66□□□□□ -1.02
SCFD1-217ENST00000555953 SERPINA10Q9UK55 444 aa8.66□□□□□ -1.02
SCFD1-217ENST00000555953 ARID3CA6NKF2 412 aa8.65□□□□□ -1.02
SCFD1-217ENST00000555953 ATP11AP98196 1134 aa8.65□□□□□ -1.02
SCFD1-217ENST00000555953 ALX3O95076 343 aa8.64□□□□□ -1.03
SCFD1-217ENST00000555953 HYAL2Q12891 473 aa8.64□□□□□ -1.03
SCFD1-217ENST00000555953 ARTNQ5T4W7 220 aa8.64□□□□□ -1.03
SCFD1-217ENST00000555953 ABTB2Q8N961 1025 aa8.64□□□□□ -1.03
SCFD1-217ENST00000555953 AKTIPQ9H8T0 292 aa8.64□□□□□ -1.03
SCFD1-217ENST00000555953 SRA1Q9HD15 236 aaKnown RBP8.64□□□□□ -1.03
SCFD1-217ENST00000555953 FNDC3AQ9Y2H6 1198 aaKnown RBP8.64□□□□□ -1.03
SCFD1-217ENST00000555953 F8W735 103 aaPredicted RBP8.63□□□□□ -1.03
SCFD1-217ENST00000555953 CYP2E1P05181 493 aaPredicted RBP8.63□□□□□ -1.03
SCFD1-217ENST00000555953 TTC39BQ5VTQ0 682 aaPredicted RBP8.63□□□□□ -1.03
SCFD1-217ENST00000555953 MRPL18Q9H0U6 180 aaKnown RBP8.63□□□□□ -1.03
SCFD1-217ENST00000555953 SCNN1AP37088 669 aa8.62□□□□□ -1.03
SCFD1-217ENST00000555953 ADAMTSL4Q6UY14 1074 aa8.62□□□□□ -1.03
SCFD1-217ENST00000555953 ATCAYQ86WG3 371 aa8.62□□□□□ -1.03
SCFD1-217ENST00000555953 MAP4K3Q8IVH8 894 aa8.62□□□□□ -1.03
SCFD1-217ENST00000555953 DZIP1LQ8IYY4 767 aaKnown RBP8.62□□□□□ -1.03
SCFD1-217ENST00000555953 TMEM130Q8N3G9 435 aa8.62□□□□□ -1.03
SCFD1-217ENST00000555953 ZFP64Q9NPA5 681 aa8.62□□□□□ -1.03
SCFD1-217ENST00000555953 ABI2Q9NYB9 513 aaPredicted RBP8.62□□□□□ -1.03
SCFD1-217ENST00000555953 PPME1Q9Y570 386 aa8.62□□□□□ -1.03
SCFD1-217ENST00000555953 KIF4AO95239 1232 aa8.61□□□□□ -1.03
SCFD1-217ENST00000555953 CEP135Q66GS9 1140 aa8.61□□□□□ -1.03
SCFD1-217ENST00000555953 CACTIN-AS1Q8N1I8 211 aa8.61□□□□□ -1.03
SCFD1-217ENST00000555953 GALNT11Q8NCW6 608 aa8.61□□□□□ -1.03
SCFD1-217ENST00000555953 NUDT16Q96DE0 195 aaKnown RBP8.61□□□□□ -1.03
SCFD1-217ENST00000555953 SPACA7Q96KW9 195 aa8.61□□□□□ -1.03
SCFD1-217ENST00000555953 LACRTQ9GZZ8 138 aa8.61□□□□□ -1.03
SCFD1-217ENST00000555953 RASSF4Q9H2L5 321 aa8.61□□□□□ -1.03
SCFD1-217ENST00000555953 TMEM63CQ9P1W3 806 aa8.61□□□□□ -1.03
SCFD1-217ENST00000555953 LINC01387J3KSC0 135 aa8.6□□□□□ -1.03
SCFD1-217ENST00000555953 TXNDC11Q6PKC3 985 aa8.6□□□□□ -1.03
SCFD1-217ENST00000555953 PRR23CQ6ZRP0 262 aa8.6□□□□□ -1.03
SCFD1-217ENST00000555953 AGGF1Q8N302 714 aaeCLIP8.6□□□□□ -1.03
SCFD1-217ENST00000555953 MUC3BQ9H195 1237 aa8.6□□□□□ -1.03
SCFD1-217ENST00000555953 ELP3Q9H9T3 547 aa8.6□□□□□ -1.03
SCFD1-217ENST00000555953 SMNDC1O75940 238 aaKnown RBP eCLIP8.59□□□□□ -1.03
SCFD1-217ENST00000555953 LRP8Q14114 963 aa8.59□□□□□ -1.03
SCFD1-217ENST00000555953 PDE12Q6L8Q7 609 aaKnown RBP8.59□□□□□ -1.03
SCFD1-217ENST00000555953 Q6ZS46 218 aa8.59□□□□□ -1.03
SCFD1-217ENST00000555953 HELQQ8TDG4 1101 aa8.59□□□□□ -1.03
SCFD1-217ENST00000555953 DCAF11Q8TEB1 546 aa8.59□□□□□ -1.03
SCFD1-217ENST00000555953 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.59□□□□□ -1.03
SCFD1-217ENST00000555953 TM4SF5O14894 197 aa8.58□□□□□ -1.04
SCFD1-217ENST00000555953 CDC27P30260 824 aa8.58□□□□□ -1.04
SCFD1-217ENST00000555953 CEP120Q8N960 986 aa8.58□□□□□ -1.04
SCFD1-217ENST00000555953 PBX4Q9BYU1 374 aa8.58□□□□□ -1.04
SCFD1-217ENST00000555953 CNTN3Q9P232 1028 aa8.58□□□□□ -1.04
SCFD1-217ENST00000555953 WISP1O95388 367 aa8.57□□□□□ -1.04
SCFD1-217ENST00000555953 CDC25BP30305 580 aa8.57□□□□□ -1.04
SCFD1-217ENST00000555953 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.57□□□□□ -1.04
SCFD1-217ENST00000555953 ZNF438Q7Z4V0 828 aa8.57□□□□□ -1.04
SCFD1-217ENST00000555953 NCAPG2Q86XI2 1143 aa8.57□□□□□ -1.04
SCFD1-217ENST00000555953 EDEM1Q92611 657 aa8.57□□□□□ -1.04
SCFD1-217ENST00000555953 KRTAP4-8Q9BYQ9 185 aa8.57□□□□□ -1.04
SCFD1-217ENST00000555953 KCNK4Q9NYG8 393 aa8.57□□□□□ -1.04
SCFD1-217ENST00000555953 KANSL3Q9P2N6 904 aa8.57□□□□□ -1.04
SCFD1-217ENST00000555953 CARD10Q9BWT7 1032 aa8.56□□□□□ -1.04
SCFD1-217ENST00000555953 SH2B1Q9NRF2 756 aaPredicted RBP8.56□□□□□ -1.04
SCFD1-217ENST00000555953 A6NHS1 94 aa8.55□□□□□ -1.04
SCFD1-217ENST00000555953 TMEM88BA6NKF7 163 aa8.55□□□□□ -1.04
SCFD1-217ENST00000555953 HYAL3O43820 417 aaPredicted RBP8.55□□□□□ -1.04
SCFD1-217ENST00000555953 GLB1P16278 677 aa8.55□□□□□ -1.04
SCFD1-217ENST00000555953 EPHA1P21709 976 aa8.55□□□□□ -1.04
SCFD1-217ENST00000555953 CD68P34810 354 aaPredicted RBP8.55□□□□□ -1.04
SCFD1-217ENST00000555953 DNM1Q05193 864 aaKnown RBP8.55□□□□□ -1.04
SCFD1-217ENST00000555953 CCDC82Q8N4S0 544 aa8.55□□□□□ -1.04
SCFD1-217ENST00000555953 POP1Q99575 1024 aaKnown RBP8.55□□□□□ -1.04
SCFD1-217ENST00000555953 GGNBP2Q9H3C7 697 aa8.55□□□□□ -1.04
SCFD1-217ENST00000555953 PDGFAP04085 211 aa8.54□□□□□ -1.04
SCFD1-217ENST00000555953 ACPPP15309 386 aa8.54□□□□□ -1.04
SCFD1-217ENST00000555953 MPSTP25325 297 aa8.54□□□□□ -1.04
SCFD1-217ENST00000555953 NOM1Q5C9Z4 860 aaKnown RBP8.54□□□□□ -1.04
SCFD1-217ENST00000555953 XKR5Q6UX68 686 aa8.54□□□□□ -1.04
SCFD1-217ENST00000555953 C1orf127Q8N9H9 656 aa8.54□□□□□ -1.04
SCFD1-217ENST00000555953 GTF3C2Q8WUA4 911 aaPredicted RBP8.54□□□□□ -1.04
SCFD1-217ENST00000555953 UBL7Q96S82 380 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms