RNA–Protein interactions for RNA: ENST00000555592.1

NPC2-206, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-206ENST00000555592 C2orf69Q8N8R5 385 aa23.55■■□□□ 1.36
NPC2-206ENST00000555592 PSME4Q14997 1843 aa23.54■■□□□ 1.36
NPC2-206ENST00000555592 FAM155AB1AL88 458 aaPredicted RBP23.54■■□□□ 1.36
NPC2-206ENST00000555592 EYA3Q99504 573 aa23.54■■□□□ 1.36
NPC2-206ENST00000555592 DBF4Q9UBU7 674 aaPredicted RBP23.53■■□□□ 1.36
NPC2-206ENST00000555592 ZNF157P51786 506 aaPredicted RBP23.52■■□□□ 1.36
NPC2-206ENST00000555592 KIF23Q02241 960 aaPredicted RBP23.52■■□□□ 1.36
NPC2-206ENST00000555592 KIF4BQ2VIQ3 1234 aa23.52■■□□□ 1.36
NPC2-206ENST00000555592 TBC1D16Q8TBP0 767 aa23.52■■□□□ 1.36
NPC2-206ENST00000555592 CCDC102AQ96A19 550 aa23.52■■□□□ 1.36
NPC2-206ENST00000555592 IRS4O14654 1257 aaPredicted RBP23.51■■□□□ 1.35
NPC2-206ENST00000555592 RPS8P62241 208 aaKnown RBP23.51■■□□□ 1.35
NPC2-206ENST00000555592 RALBP1Q15311 655 aa23.51■■□□□ 1.35
NPC2-206ENST00000555592 GGA3Q9NZ52 723 aa23.51■■□□□ 1.35
NPC2-206ENST00000555592 TRIM35Q9UPQ4 493 aa23.51■■□□□ 1.35
NPC2-206ENST00000555592 HOXB7P09629 217 aa23.5■■□□□ 1.35
NPC2-206ENST00000555592 SULF1Q8IWU6 871 aa23.5■■□□□ 1.35
NPC2-206ENST00000555592 SAGE1Q9NXZ1 904 aa23.5■■□□□ 1.35
NPC2-206ENST00000555592 TRPA1O75762 1119 aa23.49■■□□□ 1.35
NPC2-206ENST00000555592 ZC3H12CQ9C0D7 883 aaKnown RBP23.49■■□□□ 1.35
NPC2-206ENST00000555592 HYPKQ9NX55 129 aa23.49■■□□□ 1.35
NPC2-206ENST00000555592 ASTN2O75129 1339 aaPredicted RBP23.49■■□□□ 1.35
NPC2-206ENST00000555592 G3V3G9 751 aa23.48■■□□□ 1.35
NPC2-206ENST00000555592 UFL1O94874 794 aa23.48■■□□□ 1.35
NPC2-206ENST00000555592 VIL1P09327 827 aaKnown RBP23.48■■□□□ 1.35
NPC2-206ENST00000555592 DCAF8Q5TAQ9 597 aa23.48■■□□□ 1.35
NPC2-206ENST00000555592 RNF186Q9NXI6 227 aa23.48■■□□□ 1.35
NPC2-206ENST00000555592 SLC10A3P09131 477 aa23.47■■□□□ 1.35
NPC2-206ENST00000555592 TRIM28Q13263 835 aaKnown RBP23.47■■□□□ 1.35
NPC2-206ENST00000555592 CDCA5Q96FF9 252 aa23.47■■□□□ 1.35
NPC2-206ENST00000555592 SEC31BQ9NQW1 1179 aa23.47■■□□□ 1.35
NPC2-206ENST00000555592 ANKIB1Q9P2G1 1089 aa23.47■■□□□ 1.35
NPC2-206ENST00000555592 DUSP27Q5VZP5 1158 aa23.46■■□□□ 1.35
NPC2-206ENST00000555592 RUNDC1Q96C34 613 aa23.46■■□□□ 1.35
NPC2-206ENST00000555592 SPEF2Q9C093 1822 aa23.46■■□□□ 1.35
NPC2-206ENST00000555592 PODXL2Q9NZ53 605 aa23.46■■□□□ 1.35
NPC2-206ENST00000555592 RIC3Q7Z5B4 369 aa23.45■■□□□ 1.34
NPC2-206ENST00000555592 GGA1Q9UJY5 639 aa23.45■■□□□ 1.34
NPC2-206ENST00000555592 ZBTB38Q8NAP3 1195 aaPredicted RBP23.44■■□□□ 1.34
NPC2-206ENST00000555592 CSRNP1Q96S65 589 aa23.44■■□□□ 1.34
NPC2-206ENST00000555592 PAPPA2Q9BXP8 1791 aa23.44■■□□□ 1.34
NPC2-206ENST00000555592 MYH3P11055 1940 aa23.43■■□□□ 1.34
NPC2-206ENST00000555592 SOX10P56693 466 aa23.43■■□□□ 1.34
NPC2-206ENST00000555592 GOLGA2Q08379 1002 aa23.43■■□□□ 1.34
NPC2-206ENST00000555592 SCARF1Q14162 830 aa23.43■■□□□ 1.34
NPC2-206ENST00000555592 WDR43Q15061 677 aaKnown RBP eCLIP23.43■■□□□ 1.34
NPC2-206ENST00000555592 ANGEL2Q5VTE6 544 aaKnown RBP23.43■■□□□ 1.34
NPC2-206ENST00000555592 MYBBP1AQ9BQG0 1328 aaKnown RBP23.42■■□□□ 1.34
NPC2-206ENST00000555592 ZNF280AP59817 542 aaPredicted RBP23.42■■□□□ 1.34
NPC2-206ENST00000555592 RSBN1LQ6PCB5 846 aaPredicted RBP23.42■■□□□ 1.34
NPC2-206ENST00000555592 ZNF609O15014 1411 aa23.42■■□□□ 1.34
NPC2-206ENST00000555592 HSP90B1P14625 803 aaKnown RBP23.41■■□□□ 1.34
NPC2-206ENST00000555592 RASAL3Q86YV0 1011 aa23.41■■□□□ 1.34
NPC2-206ENST00000555592 AGBL3Q8NEM8 1001 aa23.41■■□□□ 1.34
NPC2-206ENST00000555592 CCDC85AQ96PX6 553 aaPredicted RBP23.41■■□□□ 1.34
NPC2-206ENST00000555592 MYD88Q99836 296 aa23.41■■□□□ 1.34
NPC2-206ENST00000555592 PHAXQ9H814 394 aaKnown RBP23.41■■□□□ 1.34
NPC2-206ENST00000555592 MBIPQ9NS73 344 aa23.41■■□□□ 1.34
NPC2-206ENST00000555592 CCDC152Q4G0S7 254 aa23.4■■□□□ 1.34
NPC2-206ENST00000555592 JARID2Q92833 1246 aaPredicted RBP23.4■■□□□ 1.34
NPC2-206ENST00000555592 ZNF646O15015 1829 aaPredicted RBP23.38■■□□□ 1.33
NPC2-206ENST00000555592 PCCAP05165 728 aaPredicted RBP23.38■■□□□ 1.33
NPC2-206ENST00000555592 USP17L8P0C7I0 530 aa23.38■■□□□ 1.33
NPC2-206ENST00000555592 CTU1Q7Z7A3 348 aaKnown RBP23.38■■□□□ 1.33
NPC2-206ENST00000555592 MYOZ2Q9NPC6 264 aa23.38■■□□□ 1.33
NPC2-206ENST00000555592 ADAMTS8Q9UP79 889 aa23.38■■□□□ 1.33
NPC2-206ENST00000555592 XDHP47989 1333 aa23.37■■□□□ 1.33
NPC2-206ENST00000555592 PDE8AO60658 829 aa23.37■■□□□ 1.33
NPC2-206ENST00000555592 FKBP1BP68106 108 aa23.37■■□□□ 1.33
NPC2-206ENST00000555592 REM2Q8IYK8 340 aaPredicted RBP23.37■■□□□ 1.33
NPC2-206ENST00000555592 CCDC191Q8NCU4 936 aa23.37■■□□□ 1.33
NPC2-206ENST00000555592 GMLQ99445 158 aa23.37■■□□□ 1.33
NPC2-206ENST00000555592 SCAF8Q9UPN6 1271 aaKnown RBP23.37■■□□□ 1.33
NPC2-206ENST00000555592 ELL2O00472 640 aaPredicted RBP23.36■■□□□ 1.33
NPC2-206ENST00000555592 MOB2Q70IA6 237 aa23.36■■□□□ 1.33
NPC2-206ENST00000555592 ANKRD18AQ8IVF6 992 aa23.36■■□□□ 1.33
NPC2-206ENST00000555592 CWC25Q9NXE8 425 aaPredicted RBP23.36■■□□□ 1.33
NPC2-206ENST00000555592 PITPNM2Q9BZ72 1349 aa23.35■■□□□ 1.33
NPC2-206ENST00000555592 USP17L3A6NCW0 530 aa23.35■■□□□ 1.33
NPC2-206ENST00000555592 USP17L4A6NCW7 530 aa23.35■■□□□ 1.33
NPC2-206ENST00000555592 USP17L1Q7RTZ2 530 aa23.35■■□□□ 1.33
NPC2-206ENST00000555592 ZNF853P0CG23 659 aa23.34■■□□□ 1.33
NPC2-206ENST00000555592 ATP2B4P23634 1241 aa23.34■■□□□ 1.33
NPC2-206ENST00000555592 UBE2Q2LH0YL09 131 aa23.33■■□□□ 1.33
NPC2-206ENST00000555592 PODNQ7Z5L7 613 aa23.33■■□□□ 1.33
NPC2-206ENST00000555592 WTIPA6NIX2 430 aaPredicted RBP23.32■■□□□ 1.32
NPC2-206ENST00000555592 DDX10Q13206 875 aaKnown RBP23.32■■□□□ 1.32
NPC2-206ENST00000555592 PRAMEF18Q5VWM3 479 aa23.32■■□□□ 1.32
NPC2-206ENST00000555592 METTL22Q9BUU2 404 aaPredicted RBP23.32■■□□□ 1.32
NPC2-206ENST00000555592 IFT57Q9NWB7 429 aa23.32■■□□□ 1.32
NPC2-206ENST00000555592 TTLL12Q14166 644 aaPredicted RBP23.31■■□□□ 1.32
NPC2-206ENST00000555592 NBPF9Q3BBW0 867 aa23.31■■□□□ 1.32
NPC2-206ENST00000555592 PCDH10Q9P2E7 1040 aa23.31■■□□□ 1.32
NPC2-206ENST00000555592 HDAC9Q9UKV0 1011 aa23.31■■□□□ 1.32
NPC2-206ENST00000555592 HPS5Q9UPZ3 1129 aa23.31■■□□□ 1.32
NPC2-206ENST00000555592 MED23Q9ULK4 1368 aa23.3■■□□□ 1.32
NPC2-206ENST00000555592 TBC1D8O95759 1140 aa23.3■■□□□ 1.32
NPC2-206ENST00000555592 GNAI1P63096 354 aa23.3■■□□□ 1.32
NPC2-206ENST00000555592 CDC5LQ99459 802 aaKnown RBP23.3■■□□□ 1.32
NPC2-206ENST00000555592 MXD3Q9BW11 206 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms