RNA–Protein interactions for RNA: ENST00000555370.5

IFT43-210, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-210ENST00000555370 CUL9Q8IWT3 2517 aa14.32□□□□□ -0.12
IFT43-210ENST00000555370 IRS4O14654 1257 aaPredicted RBP14.32□□□□□ -0.12
IFT43-210ENST00000555370 SMARCA5O60264 1052 aaPredicted RBP14.32□□□□□ -0.12
IFT43-210ENST00000555370 NTSR2O95665 410 aa14.32□□□□□ -0.12
IFT43-210ENST00000555370 RFX5P48382 616 aaPredicted RBP14.32□□□□□ -0.12
IFT43-210ENST00000555370 OS9Q13438 667 aaPredicted RBP14.32□□□□□ -0.12
IFT43-210ENST00000555370 RHPN1Q8TCX5 695 aa14.32□□□□□ -0.12
IFT43-210ENST00000555370 KIF1BPQ96EK5 621 aa14.32□□□□□ -0.12
IFT43-210ENST00000555370 COPRSQ9NQ92 184 aa14.32□□□□□ -0.12
IFT43-210ENST00000555370 PA2G4Q9UQ80 394 aaKnown RBP14.32□□□□□ -0.12
IFT43-210ENST00000555370 CHMP3Q9Y3E7 222 aa14.32□□□□□ -0.12
IFT43-210ENST00000555370 PITPNM2Q9BZ72 1349 aa14.32□□□□□ -0.12
IFT43-210ENST00000555370 PDE8AO60658 829 aa14.31□□□□□ -0.12
IFT43-210ENST00000555370 HSP90B1P14625 803 aaKnown RBP14.31□□□□□ -0.12
IFT43-210ENST00000555370 G3BP1Q13283 466 aaKnown RBP eCLIP14.31□□□□□ -0.12
IFT43-210ENST00000555370 ARFGEF1Q9Y6D6 1849 aa14.3□□□□□ -0.12
IFT43-210ENST00000555370 SBF1O95248 1867 aa14.3□□□□□ -0.12
IFT43-210ENST00000555370 CSF1RP07333 972 aa14.3□□□□□ -0.12
IFT43-210ENST00000555370 CTSWP56202 376 aa14.3□□□□□ -0.12
IFT43-210ENST00000555370 TBC1D9BQ66K14 1250 aa14.3□□□□□ -0.12
IFT43-210ENST00000555370 PLEKHM2Q8IWE5 1019 aa14.3□□□□□ -0.12
IFT43-210ENST00000555370 SYNE4Q8N205 404 aa14.3□□□□□ -0.12
IFT43-210ENST00000555370 ARAP2Q8WZ64 1704 aa14.29□□□□□ -0.12
IFT43-210ENST00000555370 FAM177BA6PVY3 158 aa14.29□□□□□ -0.12
IFT43-210ENST00000555370 LMNB1P20700 586 aa14.29□□□□□ -0.12
IFT43-210ENST00000555370 PTPN12Q05209 780 aaKnown RBP14.29□□□□□ -0.12
IFT43-210ENST00000555370 DPY19L2Q6NUT2 758 aa14.29□□□□□ -0.12
IFT43-210ENST00000555370 NYXQ9GZU5 481 aa14.29□□□□□ -0.12
IFT43-210ENST00000555370 NRXN2Q9P2S2 1712 aa14.29□□□□□ -0.12
IFT43-210ENST00000555370 TAF1P21675 1872 aa14.29□□□□□ -0.12
IFT43-210ENST00000555370 CCDC57Q2TAC2 916 aa14.28□□□□□ -0.12
IFT43-210ENST00000555370 BICDL1Q6ZP65 573 aa14.28□□□□□ -0.12
IFT43-210ENST00000555370 CARMIL3Q8ND23 1372 aa14.28□□□□□ -0.12
IFT43-210ENST00000555370 TTLL11Q8NHH1 800 aa14.28□□□□□ -0.12
IFT43-210ENST00000555370 KLHDC4Q8TBB5 520 aa14.28□□□□□ -0.12
IFT43-210ENST00000555370 SETDB2Q96T68 719 aa14.28□□□□□ -0.12
IFT43-210ENST00000555370 SALL3Q9BXA9 1300 aa14.28□□□□□ -0.12
IFT43-210ENST00000555370 SIL1Q9H173 461 aa14.28□□□□□ -0.12
IFT43-210ENST00000555370 BRCA1P38398 1863 aaKnown RBP14.27□□□□□ -0.12
IFT43-210ENST00000555370 RTL9Q8NET4 1388 aa14.27□□□□□ -0.12
IFT43-210ENST00000555370 IFIT5Q13325 482 aaKnown RBP14.27□□□□□ -0.13
IFT43-210ENST00000555370 OTUD7AQ8TE49 926 aaPredicted RBP14.27□□□□□ -0.13
IFT43-210ENST00000555370 BCL11AQ9H165 835 aa14.27□□□□□ -0.13
IFT43-210ENST00000555370 IL1RAPL2Q9NP60 686 aa14.27□□□□□ -0.13
IFT43-210ENST00000555370 TSHZ2Q9NRE2 1034 aa14.27□□□□□ -0.13
IFT43-210ENST00000555370 ABT1Q9ULW3 272 aaKnown RBP14.27□□□□□ -0.13
IFT43-210ENST00000555370 AOX1Q06278 1338 aa14.26□□□□□ -0.13
IFT43-210ENST00000555370 CIAO1O76071 339 aa14.26□□□□□ -0.13
IFT43-210ENST00000555370 SASH1O94885 1247 aa14.26□□□□□ -0.13
IFT43-210ENST00000555370 MX1P20591 662 aa14.26□□□□□ -0.13
IFT43-210ENST00000555370 GRM1Q13255 1194 aa14.26□□□□□ -0.13
IFT43-210ENST00000555370 BMP2KLQ5H9B9 411 aa14.26□□□□□ -0.13
IFT43-210ENST00000555370 TTC22Q5TAA0 569 aa14.26□□□□□ -0.13
IFT43-210ENST00000555370 NBPF5PQ86XG9 351 aaPredicted RBP14.26□□□□□ -0.13
IFT43-210ENST00000555370 NUTM1Q86Y26 1132 aa14.26□□□□□ -0.13
IFT43-210ENST00000555370 CLASRPQ8N2M8 674 aaKnown RBP14.26□□□□□ -0.13
IFT43-210ENST00000555370 FBXO3Q9UK99 471 aa14.26□□□□□ -0.13
IFT43-210ENST00000555370 ANKRD31Q8N7Z5 1873 aa14.26□□□□□ -0.13
IFT43-210ENST00000555370 RIC1Q4ADV7 1423 aa14.25□□□□□ -0.13
IFT43-210ENST00000555370 ABCC12Q96J65 1359 aa14.25□□□□□ -0.13
IFT43-210ENST00000555370 ANKRD18BA2A2Z9 1011 aa14.25□□□□□ -0.13
IFT43-210ENST00000555370 EYA2O00167 538 aa14.25□□□□□ -0.13
IFT43-210ENST00000555370 ITGBL1O95965 494 aaPredicted RBP14.25□□□□□ -0.13
IFT43-210ENST00000555370 GYS1P13807 737 aa14.25□□□□□ -0.13
IFT43-210ENST00000555370 HCLS1P14317 486 aaPredicted RBP14.25□□□□□ -0.13
IFT43-210ENST00000555370 PDE1AP54750 535 aa14.25□□□□□ -0.13
IFT43-210ENST00000555370 C8orf34Q49A92 452 aa14.25□□□□□ -0.13
IFT43-210ENST00000555370 ERFEQ4G0M1 354 aa14.25□□□□□ -0.13
IFT43-210ENST00000555370 TAF7LQ5H9L4 462 aa14.25□□□□□ -0.13
IFT43-210ENST00000555370 PAXIP1Q6ZW49 1069 aaPredicted RBP14.25□□□□□ -0.13
IFT43-210ENST00000555370 GPR101Q96P66 508 aaPredicted RBP14.25□□□□□ -0.13
IFT43-210ENST00000555370 CCDC85AQ96PX6 553 aaPredicted RBP14.25□□□□□ -0.13
IFT43-210ENST00000555370 BACH2Q9BYV9 841 aa14.25□□□□□ -0.13
IFT43-210ENST00000555370 OSBPL3Q9H4L5 887 aa14.25□□□□□ -0.13
IFT43-210ENST00000555370 GREM2Q9H772 168 aa14.25□□□□□ -0.13
IFT43-210ENST00000555370 ITGA6P23229 1130 aa14.24□□□□□ -0.13
IFT43-210ENST00000555370 GTF2E1P29083 439 aaPredicted RBP14.24□□□□□ -0.13
IFT43-210ENST00000555370 IL15P40933 162 aaPredicted RBP14.24□□□□□ -0.13
IFT43-210ENST00000555370 NFIXQ14938 502 aa14.24□□□□□ -0.13
IFT43-210ENST00000555370 CCDC152Q4G0S7 254 aa14.24□□□□□ -0.13
IFT43-210ENST00000555370 SLC10A5Q5PT55 438 aa14.24□□□□□ -0.13
IFT43-210ENST00000555370 ATG9AQ7Z3C6 839 aa14.24□□□□□ -0.13
IFT43-210ENST00000555370 LDHDQ86WU2 507 aa14.24□□□□□ -0.13
IFT43-210ENST00000555370 ZNF594Q96JF6 807 aaPredicted RBP14.24□□□□□ -0.13
IFT43-210ENST00000555370 CAPNS2Q96L46 248 aa14.24□□□□□ -0.13
IFT43-210ENST00000555370 STAP2Q9UGK3 403 aa14.24□□□□□ -0.13
IFT43-210ENST00000555370 ZNF609O15014 1411 aa14.24□□□□□ -0.13
IFT43-210ENST00000555370 CASP8AP2Q9UKL3 1982 aa14.23□□□□□ -0.13
IFT43-210ENST00000555370 IFIT2P09913 472 aaKnown RBP14.23□□□□□ -0.13
IFT43-210ENST00000555370 TPTE2Q6XPS3 522 aa14.23□□□□□ -0.13
IFT43-210ENST00000555370 AACSQ86V21 672 aa14.23□□□□□ -0.13
IFT43-210ENST00000555370 TTC41PQ6P2S7 1318 aa14.22□□□□□ -0.13
IFT43-210ENST00000555370 GSPT1P15170 499 aaKnown RBP14.22□□□□□ -0.13
IFT43-210ENST00000555370 TFCP2Q12800 502 aa14.22□□□□□ -0.13
IFT43-210ENST00000555370 GPATCH3Q96I76 525 aa14.22□□□□□ -0.13
IFT43-210ENST00000555370 COL4A1P02462 1669 aa14.22□□□□□ -0.13
IFT43-210ENST00000555370 NPHP1O15259 732 aa14.21□□□□□ -0.13
IFT43-210ENST00000555370 TM4SF1P30408 202 aa14.21□□□□□ -0.13
IFT43-210ENST00000555370 CHRNA5P30532 468 aa14.21□□□□□ -0.13
IFT43-210ENST00000555370 ECE1P42892 770 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms