RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 CCDC8Q9H0W5 538 aaPredicted RBP28.31■■■□□ 2.12
STRN3-207ENST00000555358 LINC00116Q8NCU8 138 aa28.3■■■□□ 2.12
STRN3-207ENST00000555358 TLR7Q9NYK1 1049 aaKnown RBP28.3■■■□□ 2.12
STRN3-207ENST00000555358 NHSQ6T4R5 1651 aa28.3■■■□□ 2.12
STRN3-207ENST00000555358 SYT1P21579 422 aa28.3■■■□□ 2.12
STRN3-207ENST00000555358 CSPP1Q1MSJ5 1256 aa28.3■■■□□ 2.12
STRN3-207ENST00000555358 STX6O43752 255 aa28.29■■■□□ 2.12
STRN3-207ENST00000555358 ONECUT3O60422 494 aaPredicted RBP28.29■■■□□ 2.12
STRN3-207ENST00000555358 GLRX3O76003 335 aaKnown RBP28.29■■■□□ 2.12
STRN3-207ENST00000555358 SEPT12Q8IYM1 358 aa28.29■■■□□ 2.12
STRN3-207ENST00000555358 CCDC183Q5T5S1 534 aa28.28■■■□□ 2.12
STRN3-207ENST00000555358 LARP6Q9BRS8 491 aaKnown RBP28.28■■■□□ 2.12
STRN3-207ENST00000555358 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.28■■■□□ 2.12
STRN3-207ENST00000555358 UBN2Q6ZU65 1347 aa28.28■■■□□ 2.12
STRN3-207ENST00000555358 TFCP2Q12800 502 aa28.28■■■□□ 2.12
STRN3-207ENST00000555358 FAM184AQ8NB25 1140 aa28.28■■■□□ 2.12
STRN3-207ENST00000555358 ZNF594Q96JF6 807 aaPredicted RBP28.28■■■□□ 2.12
STRN3-207ENST00000555358 QTRT2Q9H974 415 aaKnown RBP28.28■■■□□ 2.12
STRN3-207ENST00000555358 ZNF831Q5JPB2 1677 aa28.28■■■□□ 2.12
STRN3-207ENST00000555358 SBF2Q86WG5 1849 aa28.28■■■□□ 2.12
STRN3-207ENST00000555358 ECHDC1Q9NTX5 307 aa28.27■■■□□ 2.12
STRN3-207ENST00000555358 UVSSAQ2YD98 709 aa28.27■■■□□ 2.12
STRN3-207ENST00000555358 CCDC85AQ96PX6 553 aaPredicted RBP28.27■■■□□ 2.12
STRN3-207ENST00000555358 PDCL3Q9H2J4 239 aa28.27■■■□□ 2.12
STRN3-207ENST00000555358 LARGE1O95461 756 aa28.26■■■□□ 2.11
STRN3-207ENST00000555358 F13A1P00488 732 aa28.26■■■□□ 2.11
STRN3-207ENST00000555358 CPA1P15085 419 aa28.26■■■□□ 2.11
STRN3-207ENST00000555358 CASTP20810 708 aaKnown RBP28.26■■■□□ 2.11
STRN3-207ENST00000555358 ZNF34Q8IZ26 560 aa28.26■■■□□ 2.11
STRN3-207ENST00000555358 CAMTA2O94983 1202 aa28.25■■■□□ 2.11
STRN3-207ENST00000555358 UBE2HP62256 183 aa28.25■■■□□ 2.11
STRN3-207ENST00000555358 SMC3Q9UQE7 1217 aa28.25■■■□□ 2.11
STRN3-207ENST00000555358 PTH1RQ03431 593 aa28.24■■■□□ 2.11
STRN3-207ENST00000555358 PLA2G12BQ9BX93 195 aa28.24■■■□□ 2.11
STRN3-207ENST00000555358 DIAPH3Q9NSV4 1193 aa28.24■■■□□ 2.11
STRN3-207ENST00000555358 TRMT112Q9UI30 125 aaKnown RBP28.24■■■□□ 2.11
STRN3-207ENST00000555358 EP400Q96L91 3159 aa28.24■■■□□ 2.11
STRN3-207ENST00000555358 ATG9AQ7Z3C6 839 aa28.24■■■□□ 2.11
STRN3-207ENST00000555358 KCNB2Q92953 911 aa28.24■■■□□ 2.11
STRN3-207ENST00000555358 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.24■■■□□ 2.11
STRN3-207ENST00000555358 LRRC24Q50LG9 513 aa28.23■■■□□ 2.11
STRN3-207ENST00000555358 TNNI3KQ59H18 835 aa28.23■■■□□ 2.11
STRN3-207ENST00000555358 RUFY2Q8WXA3 655 aa28.23■■■□□ 2.11
STRN3-207ENST00000555358 GPATCH3Q96I76 525 aa28.23■■■□□ 2.11
STRN3-207ENST00000555358 FPGT-TNNI3KV9GXZ4 949 aa28.23■■■□□ 2.11
STRN3-207ENST00000555358 CDHR2Q9BYE9 1310 aa28.23■■■□□ 2.11
STRN3-207ENST00000555358 PTMAP06454 111 aaKnown RBP28.22■■■□□ 2.11
STRN3-207ENST00000555358 ADCK5Q3MIX3 580 aa28.22■■■□□ 2.11
STRN3-207ENST00000555358 SMIM5Q71RC9 77 aa28.22■■■□□ 2.11
STRN3-207ENST00000555358 MYH3P11055 1940 aa28.22■■■□□ 2.11
STRN3-207ENST00000555358 LETM1O95202 739 aaPredicted RBP28.22■■■□□ 2.11
STRN3-207ENST00000555358 VPS53Q5VIR6 699 aa28.22■■■□□ 2.11
STRN3-207ENST00000555358 PUS3Q9BZE2 481 aaKnown RBP28.21■■■□□ 2.11
STRN3-207ENST00000555358 TM6SF1Q9BZW5 370 aa28.21■■■□□ 2.11
STRN3-207ENST00000555358 UQCRHLA0A096LP55 91 aa28.2■■■□□ 2.11
STRN3-207ENST00000555358 CSF1RP07333 972 aa28.2■■■□□ 2.11
STRN3-207ENST00000555358 UQCRHP07919 91 aa28.2■■■□□ 2.11
STRN3-207ENST00000555358 ZSWIM6Q9HCJ5 1215 aa28.2■■■□□ 2.11
STRN3-207ENST00000555358 ATP6V1DQ9Y5K8 247 aa28.2■■■□□ 2.11
STRN3-207ENST00000555358 FAM177BA6PVY3 158 aa28.2■■■□□ 2.1
STRN3-207ENST00000555358 IRS4O14654 1257 aaPredicted RBP28.2■■■□□ 2.1
STRN3-207ENST00000555358 CCDC57Q2TAC2 916 aa28.2■■■□□ 2.1
STRN3-207ENST00000555358 DBNLQ9UJU6 430 aaKnown RBP28.2■■■□□ 2.1
STRN3-207ENST00000555358 GJB2P29033 226 aa28.19■■■□□ 2.1
STRN3-207ENST00000555358 SUSD4Q5VX71 490 aa28.19■■■□□ 2.1
STRN3-207ENST00000555358 PRPF40BQ6NWY9 871 aaKnown RBP28.19■■■□□ 2.1
STRN3-207ENST00000555358 CCDC83Q8IWF9 413 aa28.19■■■□□ 2.1
STRN3-207ENST00000555358 JAKMIP1Q96N16 626 aaKnown RBP28.19■■■□□ 2.1
STRN3-207ENST00000555358 PDRG1Q9NUG6 133 aa28.19■■■□□ 2.1
STRN3-207ENST00000555358 MTMR6Q9Y217 621 aa28.19■■■□□ 2.1
STRN3-207ENST00000555358 EYA2O00167 538 aa28.19■■■□□ 2.1
STRN3-207ENST00000555358 ST3GAL1Q11201 340 aa28.19■■■□□ 2.1
STRN3-207ENST00000555358 USP25Q9UHP3 1055 aa28.19■■■□□ 2.1
STRN3-207ENST00000555358 FIBPO43427 364 aa28.18■■■□□ 2.1
STRN3-207ENST00000555358 KIAA2012Q0VF49 1180 aa28.18■■■□□ 2.1
STRN3-207ENST00000555358 HCLS1P14317 486 aaPredicted RBP28.18■■■□□ 2.1
STRN3-207ENST00000555358 NECTIN1Q15223 517 aa28.18■■■□□ 2.1
STRN3-207ENST00000555358 TTLL11Q8NHH1 800 aa28.18■■■□□ 2.1
STRN3-207ENST00000555358 ZSCAN31Q96LW9 406 aaPredicted RBP28.18■■■□□ 2.1
STRN3-207ENST00000555358 CNTNAP4Q9C0A0 1308 aa28.17■■■□□ 2.1
STRN3-207ENST00000555358 RBM10P98175 930 aaKnown RBP28.17■■■□□ 2.1
STRN3-207ENST00000555358 FUCA2Q9BTY2 467 aa28.17■■■□□ 2.1
STRN3-207ENST00000555358 SH2B1Q9NRF2 756 aaPredicted RBP28.17■■■□□ 2.1
STRN3-207ENST00000555358 BCORQ6W2J9 1755 aa28.17■■■□□ 2.1
STRN3-207ENST00000555358 IL15P40933 162 aaPredicted RBP28.16■■■□□ 2.1
STRN3-207ENST00000555358 CTSWP56202 376 aa28.16■■■□□ 2.1
STRN3-207ENST00000555358 SASS6Q6UVJ0 657 aa28.16■■■□□ 2.1
STRN3-207ENST00000555358 DBNDD2Q9BQY9 259 aa28.16■■■□□ 2.1
STRN3-207ENST00000555358 BOLA2Q9H3K6 86 aa28.16■■■□□ 2.1
STRN3-207ENST00000555358 CCNL1Q9UK58 526 aaPredicted RBP28.16■■■□□ 2.1
STRN3-207ENST00000555358 BRWD3Q6RI45 1802 aa28.16■■■□□ 2.1
STRN3-207ENST00000555358 LY75O60449 1722 aa28.16■■■□□ 2.1
STRN3-207ENST00000555358 KLHL34Q8N239 644 aa28.16■■■□□ 2.1
STRN3-207ENST00000555358 EVI5LQ96CN4 794 aa28.16■■■□□ 2.1
STRN3-207ENST00000555358 GREM2Q9H772 168 aa28.16■■■□□ 2.1
STRN3-207ENST00000555358 CYP46A1Q9Y6A2 500 aa28.16■■■□□ 2.1
STRN3-207ENST00000555358 CCDC171Q6TFL3 1326 aa28.16■■■□□ 2.1
STRN3-207ENST00000555358 IFIT5Q13325 482 aaKnown RBP28.15■■■□□ 2.1
STRN3-207ENST00000555358 NIP7Q9Y221 180 aaKnown RBP eCLIP28.15■■■□□ 2.1
STRN3-207ENST00000555358 ADCY5O95622 1261 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms